Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02525

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02523 and MPMX19_02524 overlap by 11 nucleotidesMPMX19_02524 and MPMX19_02525 are separated by 14 nucleotidesMPMX19_02525 and MPMX19_02526 are separated by 347 nucleotides MPMX19_02523: MPMX19_02523 - Ribosome-binding factor A, at 2,643,582 to 2,644,196 _02523 MPMX19_02524: MPMX19_02524 - tRNA pseudouridine synthase B, at 2,644,186 to 2,645,127 _02524 MPMX19_02525: MPMX19_02525 - 30S ribosomal protein S15, at 2,645,142 to 2,645,411 _02525 MPMX19_02526: MPMX19_02526 - Polyribonucleotide nucleotidyltransferase, at 2,645,759 to 2,647,870 _02526 Position (kb) 2645 2646Strain fitness (log2 ratio) -2 -1 0 1at 2644.194 kb on + strandat 2644.194 kb on + strandat 2644.194 kb on + strandat 2644.194 kb on + strandat 2644.195 kb on - strandat 2644.195 kb on - strandat 2644.195 kb on - strandat 2644.195 kb on - strandat 2644.195 kb on - strandat 2644.384 kb on + strand, within MPMX19_02524at 2644.384 kb on + strand, within MPMX19_02524at 2644.384 kb on + strand, within MPMX19_02524at 2644.384 kb on + strand, within MPMX19_02524at 2644.384 kb on + strand, within MPMX19_02524at 2644.384 kb on + strand, within MPMX19_02524at 2644.384 kb on + strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.385 kb on - strand, within MPMX19_02524at 2644.408 kb on + strand, within MPMX19_02524at 2644.409 kb on - strand, within MPMX19_02524at 2644.409 kb on - strand, within MPMX19_02524at 2644.409 kb on - strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.591 kb on + strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.592 kb on - strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.720 kb on + strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2644.721 kb on - strand, within MPMX19_02524at 2645.511 kb on + strandat 2645.511 kb on + strandat 2645.511 kb on + strandat 2645.511 kb on + strandat 2645.536 kb on + strandat 2645.545 kb on + strandat 2645.545 kb on + strandat 2645.629 kb on + strandat 2645.629 kb on + strandat 2645.629 kb on + strandat 2645.664 kb on + strandat 2645.664 kb on + strandat 2645.664 kb on + strandat 2645.664 kb on + strandat 2645.664 kb on + strandat 2645.664 kb on + strandat 2645.664 kb on + strandat 2645.664 kb on + strandat 2645.664 kb on + strandat 2645.689 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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2,644,194 + -0.2
2,644,194 + +0.0
2,644,194 + -0.1
2,644,194 + -1.0
2,644,195 - -0.8
2,644,195 - -0.1
2,644,195 - -0.7
2,644,195 - +0.5
2,644,195 - -2.3
2,644,384 + MPMX19_02524 0.21 -1.4
2,644,384 + MPMX19_02524 0.21 -0.6
2,644,384 + MPMX19_02524 0.21 +0.6
2,644,384 + MPMX19_02524 0.21 -0.7
2,644,384 + MPMX19_02524 0.21 -0.5
2,644,384 + MPMX19_02524 0.21 -0.7
2,644,384 + MPMX19_02524 0.21 -0.3
2,644,385 - MPMX19_02524 0.21 +0.2
2,644,385 - MPMX19_02524 0.21 -0.7
2,644,385 - MPMX19_02524 0.21 -0.3
2,644,385 - MPMX19_02524 0.21 -0.8
2,644,385 - MPMX19_02524 0.21 -0.6
2,644,385 - MPMX19_02524 0.21 -0.9
2,644,385 - MPMX19_02524 0.21 -1.3
2,644,385 - MPMX19_02524 0.21 -2.1
2,644,385 - MPMX19_02524 0.21 +0.3
2,644,408 + MPMX19_02524 0.24 -1.0
2,644,409 - MPMX19_02524 0.24 -1.7
2,644,409 - MPMX19_02524 0.24 -0.5
2,644,409 - MPMX19_02524 0.24 -0.7
2,644,591 + MPMX19_02524 0.43 -0.1
2,644,591 + MPMX19_02524 0.43 -1.8
2,644,591 + MPMX19_02524 0.43 +0.4
2,644,591 + MPMX19_02524 0.43 -0.1
2,644,591 + MPMX19_02524 0.43 -0.6
2,644,591 + MPMX19_02524 0.43 -0.2
2,644,591 + MPMX19_02524 0.43 -0.4
2,644,591 + MPMX19_02524 0.43 +0.5
2,644,591 + MPMX19_02524 0.43 -1.2
2,644,591 + MPMX19_02524 0.43 -1.9
2,644,592 - MPMX19_02524 0.43 -0.1
2,644,592 - MPMX19_02524 0.43 -0.3
2,644,592 - MPMX19_02524 0.43 -0.1
2,644,592 - MPMX19_02524 0.43 +0.7
2,644,592 - MPMX19_02524 0.43 +1.3
2,644,592 - MPMX19_02524 0.43 -0.2
2,644,592 - MPMX19_02524 0.43 -0.3
2,644,592 - MPMX19_02524 0.43 -1.2
2,644,592 - MPMX19_02524 0.43 -1.0
2,644,592 - MPMX19_02524 0.43 -1.0
2,644,592 - MPMX19_02524 0.43 -1.3
2,644,592 - MPMX19_02524 0.43 +0.3
2,644,720 + MPMX19_02524 0.57 +1.6
2,644,720 + MPMX19_02524 0.57 -0.4
2,644,720 + MPMX19_02524 0.57 -1.2
2,644,720 + MPMX19_02524 0.57 -1.5
2,644,720 + MPMX19_02524 0.57 +0.7
2,644,720 + MPMX19_02524 0.57 +0.2
2,644,720 + MPMX19_02524 0.57 -0.2
2,644,720 + MPMX19_02524 0.57 -0.5
2,644,720 + MPMX19_02524 0.57 -0.7
2,644,720 + MPMX19_02524 0.57 -1.1
2,644,720 + MPMX19_02524 0.57 -1.3
2,644,720 + MPMX19_02524 0.57 +1.3
2,644,720 + MPMX19_02524 0.57 +0.1
2,644,720 + MPMX19_02524 0.57 -1.5
2,644,720 + MPMX19_02524 0.57 -0.1
2,644,720 + MPMX19_02524 0.57 +0.1
2,644,720 + MPMX19_02524 0.57 +0.0
2,644,720 + MPMX19_02524 0.57 -0.0
2,644,720 + MPMX19_02524 0.57 -0.1
2,644,720 + MPMX19_02524 0.57 -1.5
2,644,720 + MPMX19_02524 0.57 -0.5
2,644,720 + MPMX19_02524 0.57 -0.3
2,644,720 + MPMX19_02524 0.57 -1.3
2,644,720 + MPMX19_02524 0.57 +0.2
2,644,720 + MPMX19_02524 0.57 -0.8
2,644,720 + MPMX19_02524 0.57 -1.1
2,644,720 + MPMX19_02524 0.57 -0.4
2,644,721 - MPMX19_02524 0.57 -1.5
2,644,721 - MPMX19_02524 0.57 -0.8
2,644,721 - MPMX19_02524 0.57 -0.6
2,644,721 - MPMX19_02524 0.57 +0.5
2,644,721 - MPMX19_02524 0.57 -0.5
2,644,721 - MPMX19_02524 0.57 -0.8
2,644,721 - MPMX19_02524 0.57 -0.1
2,644,721 - MPMX19_02524 0.57 +0.9
2,644,721 - MPMX19_02524 0.57 -1.0
2,644,721 - MPMX19_02524 0.57 -1.0
2,644,721 - MPMX19_02524 0.57 -0.3
2,644,721 - MPMX19_02524 0.57 -0.1
2,644,721 - MPMX19_02524 0.57 -2.3
2,644,721 - MPMX19_02524 0.57 -1.1
2,644,721 - MPMX19_02524 0.57 -0.7
2,644,721 - MPMX19_02524 0.57 -1.5
2,644,721 - MPMX19_02524 0.57 -0.3
2,644,721 - MPMX19_02524 0.57 -1.4
2,644,721 - MPMX19_02524 0.57 -0.2
2,644,721 - MPMX19_02524 0.57 -1.4
2,644,721 - MPMX19_02524 0.57 -1.0
2,644,721 - MPMX19_02524 0.57 -1.4
2,644,721 - MPMX19_02524 0.57 -0.7
2,644,721 - MPMX19_02524 0.57 +0.7
2,644,721 - MPMX19_02524 0.57 -2.5
2,644,721 - MPMX19_02524 0.57 +0.7
2,644,721 - MPMX19_02524 0.57 -1.6
2,644,721 - MPMX19_02524 0.57 -1.1
2,644,721 - MPMX19_02524 0.57 -0.4
2,644,721 - MPMX19_02524 0.57 -1.2
2,644,721 - MPMX19_02524 0.57 -0.7
2,645,511 + +0.2
2,645,511 + -0.0
2,645,511 + -0.2
2,645,511 + -0.1
2,645,536 + -1.1
2,645,545 + -0.1
2,645,545 + +0.4
2,645,629 + +0.5
2,645,629 + -0.5
2,645,629 + -1.4
2,645,664 + +0.2
2,645,664 + +0.2
2,645,664 + -2.1
2,645,664 + -0.3
2,645,664 + -1.1
2,645,664 + -1.4
2,645,664 + +0.2
2,645,664 + -0.8
2,645,664 + -1.0
2,645,689 + -1.2

Or see this region's nucleotide sequence