Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02099 and MPMX19_02100 are separated by 273 nucleotides MPMX19_02100 and MPMX19_02101 are separated by 146 nucleotides MPMX19_02101 and MPMX19_02102 are separated by 86 nucleotides
MPMX19_02099: MPMX19_02099 - hypothetical protein, at 2,196,509 to 2,197,333
_02099
MPMX19_02100: MPMX19_02100 - ATP synthase epsilon chain, at 2,197,607 to 2,198,023
_02100
MPMX19_02101: MPMX19_02101 - ATP synthase subunit beta, at 2,198,170 to 2,199,591
_02101
MPMX19_02102: MPMX19_02102 - ATP synthase gamma chain, at 2,199,678 to 2,200,562
_02102
Position (kb)
2198
2199
2200 Strain fitness (log2 ratio)
-1
0
1 at 2197.200 kb on + strand, within MPMX19_02099 at 2197.200 kb on + strand, within MPMX19_02099 at 2197.200 kb on + strand, within MPMX19_02099 at 2197.200 kb on + strand, within MPMX19_02099 at 2197.200 kb on + strand, within MPMX19_02099 at 2197.201 kb on - strand, within MPMX19_02099 at 2197.201 kb on - strand, within MPMX19_02099 at 2197.201 kb on - strand, within MPMX19_02099 at 2197.209 kb on + strand, within MPMX19_02099 at 2197.209 kb on + strand, within MPMX19_02099 at 2197.209 kb on + strand, within MPMX19_02099 at 2197.209 kb on + strand, within MPMX19_02099 at 2197.209 kb on + strand, within MPMX19_02099 at 2197.210 kb on - strand, within MPMX19_02099 at 2197.210 kb on - strand, within MPMX19_02099 at 2197.210 kb on - strand, within MPMX19_02099 at 2197.210 kb on - strand, within MPMX19_02099 at 2197.210 kb on - strand, within MPMX19_02099 at 2197.210 kb on - strand, within MPMX19_02099 at 2197.344 kb on - strand at 2197.344 kb on - strand at 2197.385 kb on + strand at 2197.386 kb on - strand at 2197.386 kb on - strand at 2197.386 kb on - strand at 2197.481 kb on + strand at 2197.482 kb on - strand at 2197.567 kb on + strand at 2197.567 kb on + strand at 2197.567 kb on + strand at 2197.567 kb on + strand at 2197.567 kb on + strand at 2197.567 kb on + strand at 2197.567 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 2,197,200 + MPMX19_02099 0.84 +0.4 2,197,200 + MPMX19_02099 0.84 +0.1 2,197,200 + MPMX19_02099 0.84 -1.5 2,197,200 + MPMX19_02099 0.84 +0.1 2,197,200 + MPMX19_02099 0.84 -1.4 2,197,201 - MPMX19_02099 0.84 -1.3 2,197,201 - MPMX19_02099 0.84 +1.0 2,197,201 - MPMX19_02099 0.84 +0.4 2,197,209 + MPMX19_02099 0.85 +1.0 2,197,209 + MPMX19_02099 0.85 -1.2 2,197,209 + MPMX19_02099 0.85 -0.4 2,197,209 + MPMX19_02099 0.85 +0.5 2,197,209 + MPMX19_02099 0.85 +0.5 2,197,210 - MPMX19_02099 0.85 +0.1 2,197,210 - MPMX19_02099 0.85 -0.9 2,197,210 - MPMX19_02099 0.85 +1.0 2,197,210 - MPMX19_02099 0.85 -0.5 2,197,210 - MPMX19_02099 0.85 +0.1 2,197,210 - MPMX19_02099 0.85 -0.5 2,197,344 - -0.7 2,197,344 - -1.1 2,197,385 + -0.9 2,197,386 - -1.7 2,197,386 - -1.0 2,197,386 - -1.7 2,197,481 + +0.4 2,197,482 - -0.5 2,197,567 + +0.1 2,197,567 + +0.4 2,197,567 + -0.3 2,197,567 + -0.3 2,197,567 + +0.1 2,197,567 + -0.7 2,197,567 + -0.9
Or see this region's nucleotide sequence