Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00727

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00726 and MPMX19_00727 are separated by 188 nucleotidesMPMX19_00727 and MPMX19_00728 are separated by 34 nucleotidesMPMX19_00728 and MPMX19_00729 are separated by 58 nucleotides MPMX19_00726: MPMX19_00726 - Putative sugar phosphate isomerase YwlF, at 747,898 to 748,335 _00726 MPMX19_00727: MPMX19_00727 - Serine hydroxymethyltransferase 2, at 748,524 to 749,825 _00727 MPMX19_00728: MPMX19_00728 - Transcriptional repressor NrdR, at 749,860 to 750,327 _00728 MPMX19_00729: MPMX19_00729 - K(+)-insensitive pyrophosphate-energized proton pump, at 750,386 to 752,488 _00729 Position (kb) 748 749 750Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 747.645 kb on + strandat 747.645 kb on + strandat 747.645 kb on + strandat 747.646 kb on - strandat 747.646 kb on - strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.734 kb on + strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.735 kb on - strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.738 kb on + strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.739 kb on - strandat 747.854 kb on + strandat 747.854 kb on + strandat 747.854 kb on + strandat 747.854 kb on + strandat 748.378 kb on + strandat 748.378 kb on + strandat 748.378 kb on + strandat 748.378 kb on + strandat 748.378 kb on + strandat 748.378 kb on + strandat 748.378 kb on + strandat 748.378 kb on + strandat 749.811 kb on + strandat 749.812 kb on - strandat 749.812 kb on - strandat 749.823 kb on + strandat 749.823 kb on + strandat 749.823 kb on + strandat 749.823 kb on + strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.843 kb on - strandat 749.843 kb on - strandat 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.232 kb on - strand, within MPMX19_00728at 750.232 kb on - strand, within MPMX19_00728at 750.232 kb on - strand, within MPMX19_00728at 750.238 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.251 kb on - strand, within MPMX19_00728at 750.251 kb on - strand, within MPMX19_00728at 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.792 kb on + strand, within MPMX19_00729at 750.793 kb on - strand, within MPMX19_00729

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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747,645 + -0.7
747,645 + -0.8
747,645 + -0.2
747,646 - +0.0
747,646 - -0.3
747,734 + -0.8
747,734 + -0.2
747,734 + -1.0
747,734 + +0.2
747,734 + -0.2
747,734 + -0.1
747,734 + -2.0
747,734 + -1.6
747,734 + -1.1
747,734 + +1.8
747,734 + -1.3
747,734 + +0.0
747,734 + -0.9
747,735 - -1.7
747,735 - -1.2
747,735 - -1.3
747,735 - +0.0
747,735 - -0.8
747,735 - -1.1
747,735 - +0.1
747,735 - -1.0
747,735 - +0.4
747,735 - +1.0
747,738 + +0.8
747,738 + +0.0
747,738 + +2.4
747,738 + +0.0
747,738 + -0.3
747,738 + -1.0
747,738 + -0.3
747,738 + -0.4
747,738 + -0.5
747,738 + -0.3
747,738 + +0.0
747,738 + -0.5
747,738 + -1.0
747,738 + -2.0
747,738 + +0.5
747,738 + -0.7
747,738 + +0.8
747,738 + -0.6
747,738 + -1.2
747,738 + -1.9
747,738 + -1.7
747,738 + -1.0
747,738 + -1.2
747,738 + -0.1
747,738 + +0.0
747,738 + -1.2
747,738 + +0.2
747,738 + -1.5
747,738 + -0.6
747,738 + +0.2
747,738 + -1.2
747,738 + -1.2
747,738 + -2.2
747,738 + -1.8
747,738 + -0.6
747,739 - -1.6
747,739 - +0.8
747,739 - -1.2
747,739 - -1.2
747,739 - -0.2
747,739 - -0.6
747,739 - -0.5
747,739 - -2.2
747,739 - +0.5
747,739 - -0.7
747,739 - -0.6
747,739 - -2.5
747,739 - -2.2
747,739 - -0.6
747,739 - -1.6
747,739 - -2.2
747,739 - -1.1
747,739 - -0.1
747,739 - -1.9
747,739 - -0.5
747,739 - -0.2
747,739 - -2.9
747,854 + -1.0
747,854 + +0.4
747,854 + -1.1
747,854 + +0.4
748,378 + -2.6
748,378 + -0.3
748,378 + -2.4
748,378 + +0.4
748,378 + +0.4
748,378 + -0.2
748,378 + -0.6
748,378 + -2.0
749,811 + -2.1
749,812 - +0.4
749,812 - +0.0
749,823 + -0.5
749,823 + +0.4
749,823 + -2.5
749,823 + -0.9
749,824 - -0.8
749,824 - -1.2
749,824 - +0.4
749,824 - -0.6
749,824 - +0.0
749,824 - -1.0
749,838 + -0.3
749,838 + +1.0
749,838 + -3.0
749,838 + -0.1
749,838 + -0.2
749,838 + -2.0
749,839 - +0.0
749,839 - -1.1
749,839 - -0.6
749,839 - -1.2
749,839 - -0.6
749,839 - -0.6
749,839 - -0.7
749,839 - -1.5
749,839 - +0.4
749,843 - -1.3
749,843 - -2.0
750,229 + MPMX19_00728 0.79 -0.2
750,229 + MPMX19_00728 0.79 -1.2
750,229 + MPMX19_00728 0.79 -2.0
750,229 + MPMX19_00728 0.79 +0.4
750,229 + MPMX19_00728 0.79 +0.0
750,229 + MPMX19_00728 0.79 -0.4
750,229 + MPMX19_00728 0.79 -1.5
750,229 + MPMX19_00728 0.79 +0.2
750,229 + MPMX19_00728 0.79 -0.3
750,229 + MPMX19_00728 0.79 +0.8
750,229 + MPMX19_00728 0.79 -1.5
750,229 + MPMX19_00728 0.79 -3.2
750,229 + MPMX19_00728 0.79 -1.6
750,229 + MPMX19_00728 0.79 -0.5
750,229 + MPMX19_00728 0.79 +0.2
750,229 + MPMX19_00728 0.79 -1.0
750,229 + MPMX19_00728 0.79 -0.7
750,229 + MPMX19_00728 0.79 -0.8
750,230 - MPMX19_00728 0.79 +0.8
750,230 - MPMX19_00728 0.79 -0.1
750,230 - MPMX19_00728 0.79 -0.2
750,230 - MPMX19_00728 0.79 -1.2
750,230 - MPMX19_00728 0.79 -0.6
750,230 - MPMX19_00728 0.79 +0.4
750,230 - MPMX19_00728 0.79 -0.6
750,230 - MPMX19_00728 0.79 -0.8
750,230 - MPMX19_00728 0.79 -0.8
750,230 - MPMX19_00728 0.79 +2.4
750,230 - MPMX19_00728 0.79 -1.1
750,230 - MPMX19_00728 0.79 -1.0
750,230 - MPMX19_00728 0.79 -1.5
750,230 - MPMX19_00728 0.79 -1.6
750,230 - MPMX19_00728 0.79 -0.5
750,230 - MPMX19_00728 0.79 -1.2
750,230 - MPMX19_00728 0.79 -1.3
750,232 - MPMX19_00728 0.79 +0.5
750,232 - MPMX19_00728 0.79 -0.5
750,232 - MPMX19_00728 0.79 +0.0
750,238 + MPMX19_00728 0.81 +0.8
750,250 + MPMX19_00728 0.83 -1.1
750,250 + MPMX19_00728 0.83 -0.9
750,250 + MPMX19_00728 0.83 -2.1
750,250 + MPMX19_00728 0.83 +1.4
750,250 + MPMX19_00728 0.83 -2.3
750,251 - MPMX19_00728 0.84 -0.6
750,251 - MPMX19_00728 0.84 -0.3
750,478 + -1.5
750,478 + +1.0
750,478 + +0.8
750,478 + -1.9
750,478 + -0.4
750,478 + -0.2
750,478 + +0.0
750,478 + -1.5
750,478 + -0.6
750,478 + -0.1
750,478 + +0.2
750,478 + -1.3
750,478 + -0.6
750,479 - -1.6
750,479 - -0.5
750,479 - -2.0
750,479 - -1.2
750,479 - +0.8
750,479 - -1.3
750,479 - -1.9
750,479 - -2.3
750,479 - -0.5
750,479 - -0.7
750,480 + +0.0
750,480 + -0.2
750,480 + -1.3
750,480 + -1.4
750,480 + -0.8
750,480 + -1.6
750,480 + +0.2
750,480 + -0.5
750,480 + -2.3
750,481 - -1.1
750,481 - -1.2
750,481 - -1.0
750,481 - +0.0
750,481 - -0.9
750,481 - -0.5
750,481 - -2.3
750,481 - -0.2
750,481 - -1.0
750,481 - -0.2
750,481 - -2.2
750,481 - -0.5
750,481 - -0.2
750,481 - -0.7
750,702 + MPMX19_00729 0.15 -0.5
750,702 + MPMX19_00729 0.15 +0.0
750,702 + MPMX19_00729 0.15 -0.7
750,702 + MPMX19_00729 0.15 +0.0
750,702 + MPMX19_00729 0.15 -0.2
750,702 + MPMX19_00729 0.15 -1.0
750,702 + MPMX19_00729 0.15 -1.8
750,702 + MPMX19_00729 0.15 -0.1
750,702 + MPMX19_00729 0.15 -1.1
750,702 + MPMX19_00729 0.15 -1.7
750,702 + MPMX19_00729 0.15 -1.2
750,702 + MPMX19_00729 0.15 +0.2
750,703 - MPMX19_00729 0.15 +0.4
750,703 - MPMX19_00729 0.15 -1.0
750,703 - MPMX19_00729 0.15 -0.7
750,703 - MPMX19_00729 0.15 -1.2
750,703 - MPMX19_00729 0.15 +0.0
750,703 - MPMX19_00729 0.15 +0.0
750,703 - MPMX19_00729 0.15 +0.0
750,792 + MPMX19_00729 0.19 -0.7
750,793 - MPMX19_00729 0.19 -1.0

Or see this region's nucleotide sequence