Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00079

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00078 and MPMX19_00079 are separated by 36 nucleotidesMPMX19_00079 and MPMX19_00080 are separated by 6 nucleotides MPMX19_00078: MPMX19_00078 - Glyoxylate/hydroxypyruvate reductase A, at 83,416 to 84,342 _00078 MPMX19_00079: MPMX19_00079 - putative protein kinase UbiB, at 84,379 to 85,917 _00079 MPMX19_00080: MPMX19_00080 - Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE, at 85,924 to 86,730 _00080 Position (kb) 84 85 86Strain fitness (log2 ratio) -3 -2 -1 0 1at 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.396 kb on + strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.397 kb on - strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.400 kb on + strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.401 kb on - strandat 83.707 kb on + strand, within MPMX19_00078at 83.707 kb on + strand, within MPMX19_00078at 83.707 kb on + strand, within MPMX19_00078at 83.707 kb on + strand, within MPMX19_00078at 83.708 kb on - strand, within MPMX19_00078at 83.708 kb on - strand, within MPMX19_00078at 83.708 kb on - strand, within MPMX19_00078at 83.708 kb on - strand, within MPMX19_00078at 83.708 kb on - strand, within MPMX19_00078at 83.708 kb on - strand, within MPMX19_00078at 83.708 kb on - strand, within MPMX19_00078at 83.728 kb on + strand, within MPMX19_00078at 83.728 kb on + strand, within MPMX19_00078at 83.728 kb on + strand, within MPMX19_00078at 83.729 kb on - strand, within MPMX19_00078at 83.752 kb on + strand, within MPMX19_00078at 83.828 kb on + strand, within MPMX19_00078at 83.828 kb on + strand, within MPMX19_00078at 83.828 kb on + strand, within MPMX19_00078at 83.828 kb on + strand, within MPMX19_00078at 83.829 kb on - strand, within MPMX19_00078at 83.829 kb on - strand, within MPMX19_00078at 83.829 kb on - strand, within MPMX19_00078at 83.829 kb on - strand, within MPMX19_00078at 83.829 kb on - strand, within MPMX19_00078at 83.882 kb on - strand, within MPMX19_00078at 84.337 kb on + strandat 84.337 kb on + strandat 84.338 kb on - strandat 84.338 kb on - strandat 84.338 kb on - strandat 84.347 kb on + strandat 84.348 kb on - strandat 84.348 kb on - strandat 84.348 kb on - strandat 84.348 kb on - strandat 84.348 kb on - strandat 84.380 kb on + strandat 84.380 kb on + strandat 84.380 kb on + strandat 84.380 kb on + strandat 84.381 kb on - strandat 84.381 kb on - strandat 84.381 kb on - strandat 84.381 kb on - strandat 84.381 kb on - strandat 84.381 kb on - strandat 84.381 kb on - strandat 84.381 kb on - strandat 84.381 kb on - strandat 86.777 kb on + strandat 86.778 kb on - strandat 86.778 kb on - strandat 86.778 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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83,396 + -0.3
83,396 + +0.6
83,396 + -1.3
83,396 + -1.5
83,396 + +0.2
83,396 + -0.2
83,396 + +1.2
83,396 + -0.1
83,396 + -1.7
83,396 + -0.3
83,396 + +0.5
83,396 + +0.7
83,396 + +0.1
83,396 + -0.3
83,396 + -2.1
83,396 + +0.5
83,396 + -0.2
83,396 + +0.1
83,396 + -1.5
83,396 + +0.1
83,396 + +0.3
83,396 + -0.9
83,396 + +1.2
83,396 + -1.1
83,396 + -0.9
83,396 + -1.7
83,396 + -1.7
83,396 + +0.5
83,397 - -1.5
83,397 - +0.7
83,397 - +0.3
83,397 - -0.1
83,397 - +0.1
83,397 - +0.1
83,397 - +0.0
83,397 - -0.5
83,397 - -0.7
83,397 - +0.3
83,397 - +1.2
83,397 - -0.9
83,397 - +1.0
83,397 - -0.8
83,397 - -1.8
83,397 - -1.1
83,397 - +0.5
83,397 - -0.2
83,397 - +0.9
83,397 - +0.5
83,397 - -1.3
83,397 - -0.5
83,397 - -0.5
83,397 - -1.0
83,400 + -1.1
83,400 + -1.0
83,400 + -1.1
83,400 + -0.5
83,400 + +0.9
83,400 + -1.9
83,400 + -0.8
83,400 + -0.1
83,400 + -0.3
83,400 + -0.7
83,400 + -0.8
83,400 + +0.7
83,400 + -0.7
83,400 + -1.3
83,401 - -1.1
83,401 - -0.2
83,401 - -1.1
83,401 - -0.5
83,401 - -1.6
83,401 - +0.5
83,401 - -1.6
83,401 - +1.0
83,401 - -0.2
83,401 - +0.3
83,401 - -1.9
83,401 - +0.1
83,401 - -0.8
83,707 + MPMX19_00078 0.31 -0.5
83,707 + MPMX19_00078 0.31 -2.0
83,707 + MPMX19_00078 0.31 -1.1
83,707 + MPMX19_00078 0.31 -1.5
83,708 - MPMX19_00078 0.31 -0.3
83,708 - MPMX19_00078 0.31 -1.4
83,708 - MPMX19_00078 0.31 -1.7
83,708 - MPMX19_00078 0.31 -0.9
83,708 - MPMX19_00078 0.31 -2.6
83,708 - MPMX19_00078 0.31 -0.1
83,708 - MPMX19_00078 0.31 -1.5
83,728 + MPMX19_00078 0.34 -0.9
83,728 + MPMX19_00078 0.34 -0.1
83,728 + MPMX19_00078 0.34 -1.2
83,729 - MPMX19_00078 0.34 +0.2
83,752 + MPMX19_00078 0.36 +0.5
83,828 + MPMX19_00078 0.44 -1.2
83,828 + MPMX19_00078 0.44 -1.6
83,828 + MPMX19_00078 0.44 -1.3
83,828 + MPMX19_00078 0.44 -0.8
83,829 - MPMX19_00078 0.45 -0.7
83,829 - MPMX19_00078 0.45 -0.3
83,829 - MPMX19_00078 0.45 -0.7
83,829 - MPMX19_00078 0.45 -0.9
83,829 - MPMX19_00078 0.45 -1.0
83,882 - MPMX19_00078 0.50 -0.0
84,337 + -1.2
84,337 + -1.1
84,338 - -0.5
84,338 - -1.1
84,338 - +0.7
84,347 + -0.5
84,348 - -0.3
84,348 - -1.0
84,348 - -1.6
84,348 - -0.9
84,348 - -1.3
84,380 + +1.0
84,380 + -0.9
84,380 + -0.1
84,380 + -1.1
84,381 - -0.3
84,381 - -1.4
84,381 - -2.5
84,381 - +0.3
84,381 - -1.0
84,381 - -1.5
84,381 - -1.1
84,381 - -2.2
84,381 - -0.9
86,777 + -1.1
86,778 - -1.0
86,778 - -2.9
86,778 - -0.3

Or see this region's nucleotide sequence