Strain Fitness in Escherichia coli ECOR27 around NOLOHH_21115

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntfabG and NOLOHH_21110 are separated by 12 nucleotidesNOLOHH_21110 and fabH are separated by 15 nucleotidesfabH and plsX are separated by 67 nucleotides NOLOHH_21105: fabG - 3-oxoacyl-ACP reductase FabG, at 4,152,682 to 4,153,416 fabG NOLOHH_21110: NOLOHH_21110 - ACP S-malonyltransferase, at 4,153,429 to 4,154,358 _21110 NOLOHH_21115: fabH - beta-ketoacyl-ACP synthase III, at 4,154,374 to 4,155,327 fabH NOLOHH_21120: plsX - phosphate acyltransferase PlsX, at 4,155,395 to 4,156,435 plsX Position (kb) 4154 4155 4156Strain fitness (log2 ratio) -2 -1 0 1at 4153.431 kb on - strandat 4155.330 kb on - strandat 4155.351 kb on - strandat 4155.353 kb on - strandat 4155.353 kb on - strandat 4155.355 kb on - strandat 4155.355 kb on - strandat 4155.450 kb on - strandat 4155.450 kb on - strandat 4155.582 kb on - strand, within plsXat 4155.601 kb on - strand, within plsXat 4155.648 kb on - strand, within plsXat 4155.663 kb on - strand, within plsXat 4155.835 kb on - strand, within plsXat 4155.835 kb on - strand, within plsXat 4155.842 kb on - strand, within plsXat 4155.842 kb on - strand, within plsXat 4155.897 kb on - strand, within plsXat 4156.113 kb on - strand, within plsXat 4156.323 kb on - strand, within plsX

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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4,153,431 - +0.7
4,155,330 - -1.3
4,155,351 - -0.7
4,155,353 - -0.3
4,155,353 - -2.7
4,155,355 - +0.2
4,155,355 - -1.3
4,155,450 - +1.3
4,155,450 - -1.0
4,155,582 - plsX NOLOHH_21120 0.18 -2.0
4,155,601 - plsX NOLOHH_21120 0.20 -0.1
4,155,648 - plsX NOLOHH_21120 0.24 +0.3
4,155,663 - plsX NOLOHH_21120 0.26 -0.7
4,155,835 - plsX NOLOHH_21120 0.42 -0.3
4,155,835 - plsX NOLOHH_21120 0.42 -1.8
4,155,842 - plsX NOLOHH_21120 0.43 +0.2
4,155,842 - plsX NOLOHH_21120 0.43 -1.3
4,155,897 - plsX NOLOHH_21120 0.48 -0.4
4,156,113 - plsX NOLOHH_21120 0.69 +0.1
4,156,323 - plsX NOLOHH_21120 0.89 -1.3

Or see this region's nucleotide sequence