Strain Fitness in Escherichia coli ECOR27 around NOLOHH_14510

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntnuoI and nuoJ are separated by 11 nucleotidesnuoJ and nuoK overlap by 4 nucleotidesnuoK and nuoL overlap by 4 nucleotidesnuoL and nuoM are separated by 163 nucleotides NOLOHH_14495: nuoI - NADH-quinone oxidoreductase subunit NuoI, at 2,825,554 to 2,826,096 nuoI NOLOHH_14500: nuoJ - NADH-quinone oxidoreductase subunit J, at 2,826,108 to 2,826,662 nuoJ NOLOHH_14505: nuoK - NADH-quinone oxidoreductase subunit NuoK, at 2,826,659 to 2,826,961 nuoK NOLOHH_14510: nuoL - NADH-quinone oxidoreductase subunit L, at 2,826,958 to 2,828,799 nuoL NOLOHH_14515: nuoM - NADH-quinone oxidoreductase subunit M, at 2,828,963 to 2,830,492 nuoM Position (kb) 2826 2827 2828 2829Strain fitness (log2 ratio) -2 -1 0 1 2at 2825.998 kb on - strand, within nuoIat 2826.005 kb on - strand, within nuoIat 2826.039 kb on + strand, within nuoIat 2826.145 kb on + strandat 2826.145 kb on + strandat 2826.174 kb on - strand, within nuoJat 2826.199 kb on - strand, within nuoJat 2826.199 kb on - strand, within nuoJat 2826.207 kb on - strand, within nuoJat 2826.296 kb on + strand, within nuoJat 2826.500 kb on + strand, within nuoJat 2826.500 kb on + strand, within nuoJat 2826.500 kb on + strand, within nuoJat 2826.516 kb on + strand, within nuoJat 2826.520 kb on + strand, within nuoJat 2826.542 kb on + strand, within nuoJat 2826.542 kb on + strand, within nuoJat 2826.543 kb on - strand, within nuoJat 2826.544 kb on + strand, within nuoJat 2826.748 kb on + strand, within nuoKat 2826.775 kb on + strand, within nuoKat 2826.842 kb on + strand, within nuoKat 2826.842 kb on + strand, within nuoKat 2826.843 kb on - strand, within nuoKat 2826.843 kb on - strand, within nuoKat 2827.136 kb on - strandat 2827.177 kb on - strand, within nuoLat 2827.189 kb on - strand, within nuoLat 2827.261 kb on + strand, within nuoLat 2827.261 kb on + strand, within nuoLat 2827.261 kb on + strand, within nuoLat 2827.261 kb on + strand, within nuoLat 2827.261 kb on + strand, within nuoLat 2827.262 kb on - strand, within nuoLat 2827.262 kb on - strand, within nuoLat 2827.262 kb on - strand, within nuoLat 2827.273 kb on + strand, within nuoLat 2827.273 kb on + strand, within nuoLat 2827.273 kb on + strand, within nuoLat 2827.294 kb on + strand, within nuoLat 2827.295 kb on - strand, within nuoLat 2827.341 kb on - strand, within nuoLat 2827.375 kb on + strand, within nuoLat 2827.375 kb on + strand, within nuoLat 2827.426 kb on + strand, within nuoLat 2827.430 kb on - strand, within nuoLat 2827.523 kb on - strand, within nuoLat 2827.910 kb on - strand, within nuoLat 2828.084 kb on - strand, within nuoLat 2828.084 kb on - strand, within nuoLat 2828.152 kb on - strand, within nuoLat 2828.505 kb on + strand, within nuoLat 2828.505 kb on + strand, within nuoLat 2828.506 kb on - strand, within nuoLat 2828.564 kb on - strand, within nuoLat 2828.711 kb on + strandat 2828.737 kb on + strandat 2828.789 kb on + strandat 2828.789 kb on + strandat 2828.829 kb on + strandat 2828.829 kb on + strandat 2828.829 kb on + strandat 2828.829 kb on + strandat 2828.829 kb on + strandat 2828.830 kb on - strandat 2828.831 kb on + strandat 2828.831 kb on + strandat 2828.831 kb on + strandat 2828.831 kb on + strandat 2828.831 kb on + strandat 2828.831 kb on + strandat 2828.832 kb on - strandat 2828.832 kb on - strandat 2828.832 kb on - strandat 2828.832 kb on - strandat 2828.832 kb on - strandat 2828.839 kb on + strandat 2828.943 kb on + strandat 2828.944 kb on - strandat 2828.985 kb on + strandat 2829.116 kb on + strand, within nuoMat 2829.197 kb on - strand, within nuoMat 2829.270 kb on + strand, within nuoMat 2829.270 kb on + strand, within nuoMat 2829.270 kb on + strand, within nuoMat 2829.271 kb on - strand, within nuoMat 2829.271 kb on - strand, within nuoMat 2829.271 kb on - strand, within nuoMat 2829.413 kb on + strand, within nuoMat 2829.491 kb on + strand, within nuoMat 2829.551 kb on + strand, within nuoMat 2829.552 kb on - strand, within nuoMat 2829.552 kb on - strand, within nuoMat 2829.624 kb on - strand, within nuoM

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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2,825,998 - nuoI NOLOHH_14495 0.82 -1.2
2,826,005 - nuoI NOLOHH_14495 0.83 +0.3
2,826,039 + nuoI NOLOHH_14495 0.89 +0.8
2,826,145 + +0.3
2,826,145 + +0.9
2,826,174 - nuoJ NOLOHH_14500 0.12 +0.3
2,826,199 - nuoJ NOLOHH_14500 0.16 -0.7
2,826,199 - nuoJ NOLOHH_14500 0.16 -2.5
2,826,207 - nuoJ NOLOHH_14500 0.18 +1.3
2,826,296 + nuoJ NOLOHH_14500 0.34 -1.3
2,826,500 + nuoJ NOLOHH_14500 0.71 +0.3
2,826,500 + nuoJ NOLOHH_14500 0.71 +0.3
2,826,500 + nuoJ NOLOHH_14500 0.71 -1.3
2,826,516 + nuoJ NOLOHH_14500 0.74 +0.3
2,826,520 + nuoJ NOLOHH_14500 0.74 -0.4
2,826,542 + nuoJ NOLOHH_14500 0.78 +1.3
2,826,542 + nuoJ NOLOHH_14500 0.78 +0.7
2,826,543 - nuoJ NOLOHH_14500 0.78 +0.3
2,826,544 + nuoJ NOLOHH_14500 0.79 -0.7
2,826,748 + nuoK NOLOHH_14505 0.29 +0.3
2,826,775 + nuoK NOLOHH_14505 0.38 +0.3
2,826,842 + nuoK NOLOHH_14505 0.60 +0.0
2,826,842 + nuoK NOLOHH_14505 0.60 +1.9
2,826,843 - nuoK NOLOHH_14505 0.61 +0.3
2,826,843 - nuoK NOLOHH_14505 0.61 +0.9
2,827,136 - -1.7
2,827,177 - nuoL NOLOHH_14510 0.12 +0.3
2,827,189 - nuoL NOLOHH_14510 0.13 -0.7
2,827,261 + nuoL NOLOHH_14510 0.16 -1.5
2,827,261 + nuoL NOLOHH_14510 0.16 +0.3
2,827,261 + nuoL NOLOHH_14510 0.16 -1.7
2,827,261 + nuoL NOLOHH_14510 0.16 +1.3
2,827,261 + nuoL NOLOHH_14510 0.16 +0.3
2,827,262 - nuoL NOLOHH_14510 0.17 +0.0
2,827,262 - nuoL NOLOHH_14510 0.17 -0.2
2,827,262 - nuoL NOLOHH_14510 0.17 -0.7
2,827,273 + nuoL NOLOHH_14510 0.17 -1.2
2,827,273 + nuoL NOLOHH_14510 0.17 -1.0
2,827,273 + nuoL NOLOHH_14510 0.17 +0.3
2,827,294 + nuoL NOLOHH_14510 0.18 +1.9
2,827,295 - nuoL NOLOHH_14510 0.18 +0.3
2,827,341 - nuoL NOLOHH_14510 0.21 +0.3
2,827,375 + nuoL NOLOHH_14510 0.23 +0.3
2,827,375 + nuoL NOLOHH_14510 0.23 -1.2
2,827,426 + nuoL NOLOHH_14510 0.25 -0.2
2,827,430 - nuoL NOLOHH_14510 0.26 -0.2
2,827,523 - nuoL NOLOHH_14510 0.31 +0.3
2,827,910 - nuoL NOLOHH_14510 0.52 -0.2
2,828,084 - nuoL NOLOHH_14510 0.61 -0.7
2,828,084 - nuoL NOLOHH_14510 0.61 -0.2
2,828,152 - nuoL NOLOHH_14510 0.65 -0.7
2,828,505 + nuoL NOLOHH_14510 0.84 +0.3
2,828,505 + nuoL NOLOHH_14510 0.84 +0.3
2,828,506 - nuoL NOLOHH_14510 0.84 +0.3
2,828,564 - nuoL NOLOHH_14510 0.87 +0.8
2,828,711 + -0.7
2,828,737 + -0.7
2,828,789 + -2.5
2,828,789 + -0.7
2,828,829 + -1.0
2,828,829 + -0.8
2,828,829 + -1.7
2,828,829 + -1.2
2,828,829 + -0.7
2,828,830 - +0.3
2,828,831 + -0.7
2,828,831 + -0.7
2,828,831 + -0.4
2,828,831 + -0.2
2,828,831 + +0.8
2,828,831 + -0.7
2,828,832 - +1.3
2,828,832 - -1.1
2,828,832 - +1.3
2,828,832 - -1.0
2,828,832 - -0.7
2,828,839 + +0.6
2,828,943 + -0.7
2,828,944 - -0.2
2,828,985 + +1.3
2,829,116 + nuoM NOLOHH_14515 0.10 +0.8
2,829,197 - nuoM NOLOHH_14515 0.15 -1.2
2,829,270 + nuoM NOLOHH_14515 0.20 -0.7
2,829,270 + nuoM NOLOHH_14515 0.20 -0.7
2,829,270 + nuoM NOLOHH_14515 0.20 +0.3
2,829,271 - nuoM NOLOHH_14515 0.20 +1.9
2,829,271 - nuoM NOLOHH_14515 0.20 +0.3
2,829,271 - nuoM NOLOHH_14515 0.20 +0.3
2,829,413 + nuoM NOLOHH_14515 0.29 +0.3
2,829,491 + nuoM NOLOHH_14515 0.35 -1.2
2,829,551 + nuoM NOLOHH_14515 0.38 +1.3
2,829,552 - nuoM NOLOHH_14515 0.38 -0.7
2,829,552 - nuoM NOLOHH_14515 0.38 -0.2
2,829,624 - nuoM NOLOHH_14515 0.43 -1.2

Or see this region's nucleotide sequence