Strain Fitness in Escherichia coli ECOR27 around NOLOHH_13740

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nteutG and eutH are separated by 116 nucleotideseutH and eutA overlap by 4 nucleotides NOLOHH_13735: eutG - ethanolamine utilization ethanol dehydrogenase EutG, at 2,669,226 to 2,670,413 eutG NOLOHH_13740: eutH - ethanolamine utilization protein EutH, at 2,670,530 to 2,671,756 eutH NOLOHH_13745: eutA - ethanolamine ammonia-lyase reactivating factor EutA, at 2,671,753 to 2,673,156 eutA Position (kb) 2670 2671 2672Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2669.725 kb on + strand, within eutGat 2669.726 kb on - strand, within eutGat 2669.726 kb on - strand, within eutGat 2669.886 kb on + strand, within eutGat 2669.886 kb on + strand, within eutGat 2670.023 kb on + strand, within eutGat 2670.024 kb on - strand, within eutGat 2670.230 kb on + strand, within eutGat 2670.231 kb on - strand, within eutGat 2670.241 kb on + strand, within eutGat 2670.241 kb on + strand, within eutGat 2670.310 kb on - strandat 2670.342 kb on - strandat 2670.411 kb on + strandat 2670.411 kb on + strandat 2670.412 kb on - strandat 2670.467 kb on - strandat 2670.467 kb on - strandat 2670.467 kb on - strandat 2670.476 kb on - strandat 2670.501 kb on + strandat 2670.501 kb on + strandat 2670.506 kb on - strandat 2670.506 kb on - strandat 2670.512 kb on + strandat 2670.512 kb on + strandat 2670.512 kb on + strandat 2670.513 kb on - strandat 2670.513 kb on - strandat 2670.513 kb on - strandat 2670.523 kb on - strandat 2670.554 kb on + strandat 2670.554 kb on + strandat 2670.554 kb on + strandat 2670.555 kb on - strandat 2670.580 kb on - strandat 2670.635 kb on - strandat 2670.685 kb on + strand, within eutHat 2670.753 kb on + strand, within eutHat 2670.879 kb on + strand, within eutHat 2670.880 kb on - strand, within eutHat 2670.892 kb on - strand, within eutHat 2670.893 kb on + strand, within eutHat 2670.893 kb on + strand, within eutHat 2670.893 kb on + strand, within eutHat 2670.893 kb on + strand, within eutHat 2670.893 kb on + strand, within eutHat 2670.903 kb on + strand, within eutHat 2671.036 kb on + strand, within eutHat 2671.037 kb on - strand, within eutHat 2671.037 kb on - strand, within eutHat 2671.057 kb on + strand, within eutHat 2671.057 kb on + strand, within eutHat 2671.057 kb on + strand, within eutHat 2671.057 kb on + strand, within eutHat 2671.057 kb on + strand, within eutHat 2671.058 kb on - strand, within eutHat 2671.304 kb on - strand, within eutHat 2671.605 kb on + strand, within eutHat 2671.605 kb on + strand, within eutHat 2671.606 kb on - strand, within eutHat 2671.606 kb on - strand, within eutHat 2671.606 kb on - strand, within eutHat 2671.729 kb on + strandat 2671.730 kb on - strandat 2671.769 kb on + strandat 2671.770 kb on - strandat 2671.878 kb on + strandat 2671.890 kb on + strandat 2671.890 kb on + strandat 2671.941 kb on - strand, within eutAat 2671.970 kb on + strand, within eutAat 2671.978 kb on + strand, within eutAat 2672.230 kb on + strand, within eutAat 2672.231 kb on - strand, within eutAat 2672.231 kb on - strand, within eutAat 2672.231 kb on - strand, within eutAat 2672.706 kb on + strand, within eutAat 2672.707 kb on - strand, within eutAat 2672.707 kb on - strand, within eutAat 2672.747 kb on + strand, within eutAat 2672.748 kb on - strand, within eutA

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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2,669,725 + eutG NOLOHH_13735 0.42 -0.6
2,669,726 - eutG NOLOHH_13735 0.42 +0.0
2,669,726 - eutG NOLOHH_13735 0.42 -0.9
2,669,886 + eutG NOLOHH_13735 0.56 -0.1
2,669,886 + eutG NOLOHH_13735 0.56 -0.1
2,670,023 + eutG NOLOHH_13735 0.67 -1.7
2,670,024 - eutG NOLOHH_13735 0.67 -0.3
2,670,230 + eutG NOLOHH_13735 0.85 +0.6
2,670,231 - eutG NOLOHH_13735 0.85 +2.2
2,670,241 + eutG NOLOHH_13735 0.85 +0.1
2,670,241 + eutG NOLOHH_13735 0.85 -0.2
2,670,310 - +1.0
2,670,342 - +0.3
2,670,411 + +0.7
2,670,411 + -0.2
2,670,412 - +1.3
2,670,467 - +0.6
2,670,467 - +1.3
2,670,467 - +0.3
2,670,476 - +0.7
2,670,501 + -0.7
2,670,501 + -0.7
2,670,506 - +2.3
2,670,506 - -0.3
2,670,512 + -0.7
2,670,512 + +0.3
2,670,512 + +0.9
2,670,513 - +0.9
2,670,513 - -0.7
2,670,513 - +0.3
2,670,523 - +0.5
2,670,554 + +0.3
2,670,554 + -0.4
2,670,554 + -1.0
2,670,555 - +0.8
2,670,580 - +1.6
2,670,635 - -1.9
2,670,685 + eutH NOLOHH_13740 0.13 -0.3
2,670,753 + eutH NOLOHH_13740 0.18 -0.4
2,670,879 + eutH NOLOHH_13740 0.28 -1.0
2,670,880 - eutH NOLOHH_13740 0.29 +0.3
2,670,892 - eutH NOLOHH_13740 0.30 +1.3
2,670,893 + eutH NOLOHH_13740 0.30 -0.4
2,670,893 + eutH NOLOHH_13740 0.30 +0.0
2,670,893 + eutH NOLOHH_13740 0.30 +1.5
2,670,893 + eutH NOLOHH_13740 0.30 -0.7
2,670,893 + eutH NOLOHH_13740 0.30 -0.3
2,670,903 + eutH NOLOHH_13740 0.30 -0.7
2,671,036 + eutH NOLOHH_13740 0.41 +0.2
2,671,037 - eutH NOLOHH_13740 0.41 -0.1
2,671,037 - eutH NOLOHH_13740 0.41 +0.3
2,671,057 + eutH NOLOHH_13740 0.43 -0.0
2,671,057 + eutH NOLOHH_13740 0.43 +0.6
2,671,057 + eutH NOLOHH_13740 0.43 +1.9
2,671,057 + eutH NOLOHH_13740 0.43 -1.3
2,671,057 + eutH NOLOHH_13740 0.43 -3.0
2,671,058 - eutH NOLOHH_13740 0.43 +0.7
2,671,304 - eutH NOLOHH_13740 0.63 +0.3
2,671,605 + eutH NOLOHH_13740 0.88 -1.3
2,671,605 + eutH NOLOHH_13740 0.88 -0.3
2,671,606 - eutH NOLOHH_13740 0.88 +0.3
2,671,606 - eutH NOLOHH_13740 0.88 +1.3
2,671,606 - eutH NOLOHH_13740 0.88 +0.7
2,671,729 + -0.6
2,671,730 - +0.2
2,671,769 + -1.3
2,671,770 - -2.7
2,671,878 + -0.3
2,671,890 + -0.7
2,671,890 + +0.0
2,671,941 - eutA NOLOHH_13745 0.13 +1.0
2,671,970 + eutA NOLOHH_13745 0.15 -0.4
2,671,978 + eutA NOLOHH_13745 0.16 +0.9
2,672,230 + eutA NOLOHH_13745 0.34 -0.3
2,672,231 - eutA NOLOHH_13745 0.34 +0.7
2,672,231 - eutA NOLOHH_13745 0.34 +0.3
2,672,231 - eutA NOLOHH_13745 0.34 +0.9
2,672,706 + eutA NOLOHH_13745 0.68 +0.1
2,672,707 - eutA NOLOHH_13745 0.68 +0.6
2,672,707 - eutA NOLOHH_13745 0.68 -2.0
2,672,747 + eutA NOLOHH_13745 0.71 +0.7
2,672,748 - eutA NOLOHH_13745 0.71 -0.5

Or see this region's nucleotide sequence