Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt argG and fMet_trna are separated by 347 nucleotides fMet_trna and rimP are separated by 206 nucleotides rimP and nusA are separated by 27 nucleotides
NOLOHH_09890: argG - argininosuccinate synthase, at 1,905,405 to 1,906,748
argG
NOLOHH_09895: fMet_trna - tRNA-fMet(cat), at 1,907,096 to 1,907,172
_trna
NOLOHH_09900: rimP - ribosome maturation factor RimP, at 1,907,379 to 1,907,831
rimP
NOLOHH_09905: nusA - Transcription termination/antitermination protein NusA, at 1,907,859 to 1,909,346
nusA
Position (kb)
1907
1908 Strain fitness (log2 ratio)
-2
-1
0
1 at 1906.416 kb on - strand, within argG at 1906.453 kb on + strand, within argG at 1906.454 kb on - strand, within argG at 1906.476 kb on - strand, within argG at 1906.506 kb on - strand, within argG at 1906.562 kb on - strand, within argG at 1906.591 kb on + strand, within argG at 1906.592 kb on - strand, within argG at 1906.592 kb on - strand, within argG at 1906.626 kb on - strand at 1906.626 kb on - strand at 1906.626 kb on - strand at 1906.626 kb on - strand at 1906.627 kb on + strand at 1906.627 kb on + strand at 1906.627 kb on + strand at 1906.627 kb on + strand at 1906.627 kb on + strand at 1906.627 kb on + strand at 1906.627 kb on + strand at 1906.627 kb on + strand at 1906.628 kb on - strand at 1906.628 kb on - strand at 1906.628 kb on - strand at 1906.628 kb on - strand at 1906.710 kb on - strand at 1906.710 kb on - strand at 1906.710 kb on - strand at 1906.710 kb on - strand at 1906.753 kb on + strand at 1906.765 kb on + strand at 1906.765 kb on + strand at 1906.766 kb on - strand at 1906.766 kb on - strand at 1906.769 kb on + strand at 1906.769 kb on + strand at 1906.770 kb on - strand at 1906.886 kb on - strand at 1906.947 kb on - strand at 1907.000 kb on + strand at 1907.001 kb on - strand at 1907.049 kb on + strand at 1907.200 kb on + strand at 1907.829 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 1,906,416 - argG NOLOHH_09890 0.75 -1.6 1,906,453 + argG NOLOHH_09890 0.78 +0.2 1,906,454 - argG NOLOHH_09890 0.78 -0.3 1,906,476 - argG NOLOHH_09890 0.80 -0.8 1,906,506 - argG NOLOHH_09890 0.82 -0.1 1,906,562 - argG NOLOHH_09890 0.86 -0.5 1,906,591 + argG NOLOHH_09890 0.88 +0.6 1,906,592 - argG NOLOHH_09890 0.88 -0.3 1,906,592 - argG NOLOHH_09890 0.88 -0.1 1,906,626 - +0.4 1,906,626 - -0.0 1,906,626 - +0.2 1,906,626 - -0.5 1,906,627 + -1.2 1,906,627 + -0.1 1,906,627 + -0.4 1,906,627 + -2.2 1,906,627 + -0.2 1,906,627 + -0.3 1,906,627 + +0.7 1,906,627 + -0.9 1,906,628 - +0.4 1,906,628 - -0.0 1,906,628 - -0.4 1,906,628 - +0.4 1,906,710 - -0.2 1,906,710 - +1.0 1,906,710 - -1.0 1,906,710 - -0.5 1,906,753 + +0.4 1,906,765 + +0.9 1,906,765 + +0.0 1,906,766 - +0.7 1,906,766 - +0.5 1,906,769 + -0.5 1,906,769 + -1.2 1,906,770 - -0.6 1,906,886 - +0.0 1,906,947 - +1.4 1,907,000 + +0.1 1,907,001 - +0.3 1,907,049 + +0.4 1,907,200 + -1.2 1,907,829 + +0.4
Or see this region's nucleotide sequence