Strain Fitness in Escherichia coli ECOR27 around NOLOHH_06585

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntNOLOHH_06580 and cyaY are separated by 47 nucleotidescyaY and cyaA are separated by 39 nucleotides NOLOHH_06580: NOLOHH_06580 - DKNYY family protein, at 1,240,707 to 1,242,032 _06580 NOLOHH_06585: cyaY - iron donor protein CyaY, at 1,242,080 to 1,242,400 cyaY NOLOHH_06590: cyaA - class I adenylate cyclase, at 1,242,440 to 1,244,986 cyaA Position (kb) 1242 1243Strain fitness (log2 ratio) -2 -1 0 1 2at 1241.094 kb on + strand, within NOLOHH_06580at 1241.094 kb on + strand, within NOLOHH_06580at 1241.094 kb on + strand, within NOLOHH_06580at 1241.094 kb on + strand, within NOLOHH_06580at 1241.094 kb on + strand, within NOLOHH_06580at 1241.095 kb on - strand, within NOLOHH_06580at 1241.095 kb on - strand, within NOLOHH_06580at 1241.095 kb on - strand, within NOLOHH_06580at 1241.096 kb on + strand, within NOLOHH_06580at 1241.096 kb on + strand, within NOLOHH_06580at 1241.097 kb on - strand, within NOLOHH_06580at 1241.097 kb on - strand, within NOLOHH_06580at 1241.129 kb on + strand, within NOLOHH_06580at 1241.129 kb on + strand, within NOLOHH_06580at 1241.129 kb on + strand, within NOLOHH_06580at 1241.130 kb on - strand, within NOLOHH_06580at 1241.180 kb on + strand, within NOLOHH_06580at 1241.181 kb on - strand, within NOLOHH_06580at 1241.181 kb on - strand, within NOLOHH_06580at 1241.181 kb on - strand, within NOLOHH_06580at 1241.181 kb on - strand, within NOLOHH_06580at 1241.181 kb on - strand, within NOLOHH_06580at 1241.204 kb on + strand, within NOLOHH_06580at 1241.214 kb on + strand, within NOLOHH_06580at 1241.214 kb on + strand, within NOLOHH_06580at 1241.247 kb on - strand, within NOLOHH_06580at 1241.247 kb on - strand, within NOLOHH_06580at 1241.252 kb on + strand, within NOLOHH_06580at 1241.253 kb on - strand, within NOLOHH_06580at 1241.257 kb on + strand, within NOLOHH_06580at 1241.282 kb on + strand, within NOLOHH_06580at 1241.283 kb on - strand, within NOLOHH_06580at 1241.294 kb on + strand, within NOLOHH_06580at 1241.294 kb on + strand, within NOLOHH_06580at 1241.295 kb on - strand, within NOLOHH_06580at 1241.295 kb on - strand, within NOLOHH_06580at 1241.295 kb on - strand, within NOLOHH_06580at 1241.302 kb on + strand, within NOLOHH_06580at 1241.316 kb on + strand, within NOLOHH_06580at 1241.351 kb on + strand, within NOLOHH_06580at 1241.351 kb on + strand, within NOLOHH_06580at 1241.352 kb on - strand, within NOLOHH_06580at 1241.352 kb on - strand, within NOLOHH_06580at 1241.355 kb on + strand, within NOLOHH_06580at 1241.359 kb on + strand, within NOLOHH_06580at 1241.359 kb on + strand, within NOLOHH_06580at 1241.360 kb on - strand, within NOLOHH_06580at 1241.497 kb on + strand, within NOLOHH_06580at 1241.497 kb on + strand, within NOLOHH_06580at 1241.497 kb on + strand, within NOLOHH_06580at 1241.546 kb on + strand, within NOLOHH_06580at 1241.590 kb on + strand, within NOLOHH_06580at 1241.591 kb on - strand, within NOLOHH_06580at 1241.591 kb on - strand, within NOLOHH_06580at 1241.634 kb on - strand, within NOLOHH_06580at 1241.643 kb on + strand, within NOLOHH_06580at 1241.644 kb on - strand, within NOLOHH_06580at 1241.645 kb on + strand, within NOLOHH_06580at 1241.646 kb on - strand, within NOLOHH_06580at 1241.646 kb on - strand, within NOLOHH_06580at 1241.658 kb on + strand, within NOLOHH_06580at 1241.658 kb on + strand, within NOLOHH_06580at 1241.658 kb on + strand, within NOLOHH_06580at 1241.658 kb on + strand, within NOLOHH_06580at 1241.659 kb on - strand, within NOLOHH_06580at 1241.659 kb on - strand, within NOLOHH_06580at 1241.659 kb on - strand, within NOLOHH_06580at 1241.659 kb on - strand, within NOLOHH_06580at 1241.701 kb on + strand, within NOLOHH_06580at 1241.701 kb on + strand, within NOLOHH_06580at 1241.744 kb on + strand, within NOLOHH_06580at 1241.744 kb on + strand, within NOLOHH_06580at 1241.745 kb on - strand, within NOLOHH_06580at 1241.745 kb on - strand, within NOLOHH_06580at 1241.745 kb on - strand, within NOLOHH_06580at 1241.766 kb on + strand, within NOLOHH_06580at 1241.766 kb on + strand, within NOLOHH_06580at 1241.766 kb on + strand, within NOLOHH_06580at 1241.767 kb on - strand, within NOLOHH_06580at 1241.782 kb on + strand, within NOLOHH_06580at 1241.782 kb on + strand, within NOLOHH_06580at 1241.782 kb on + strand, within NOLOHH_06580at 1241.813 kb on + strand, within NOLOHH_06580at 1241.828 kb on + strand, within NOLOHH_06580at 1241.829 kb on - strand, within NOLOHH_06580at 1241.865 kb on + strand, within NOLOHH_06580at 1241.865 kb on + strand, within NOLOHH_06580at 1241.866 kb on - strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.867 kb on + strand, within NOLOHH_06580at 1241.868 kb on - strand, within NOLOHH_06580at 1241.868 kb on - strand, within NOLOHH_06580at 1241.868 kb on - strand, within NOLOHH_06580at 1241.868 kb on - strand, within NOLOHH_06580at 1241.868 kb on - strand, within NOLOHH_06580at 1241.868 kb on - strand, within NOLOHH_06580at 1241.887 kb on + strand, within NOLOHH_06580at 1241.895 kb on - strand, within NOLOHH_06580at 1241.966 kb on + strandat 1241.966 kb on + strandat 1241.966 kb on + strandat 1241.966 kb on + strandat 1241.966 kb on + strandat 1241.967 kb on - strandat 1241.967 kb on - strandat 1241.967 kb on - strandat 1241.967 kb on - strandat 1241.969 kb on + strandat 1241.969 kb on + strandat 1242.045 kb on - strandat 1242.062 kb on + strandat 1242.063 kb on - strandat 1242.073 kb on + strandat 1242.073 kb on + strandat 1242.073 kb on + strandat 1242.073 kb on + strandat 1242.073 kb on + strandat 1242.073 kb on + strandat 1242.193 kb on - strand, within cyaYat 1242.202 kb on + strand, within cyaYat 1242.202 kb on + strand, within cyaYat 1242.203 kb on - strand, within cyaYat 1242.203 kb on - strand, within cyaYat 1242.203 kb on - strand, within cyaYat 1242.229 kb on + strand, within cyaYat 1242.298 kb on - strand, within cyaYat 1242.298 kb on - strand, within cyaYat 1242.298 kb on - strand, within cyaYat 1242.415 kb on + strandat 1242.450 kb on + strandat 1242.458 kb on + strandat 1242.459 kb on - strandat 1242.459 kb on - strandat 1242.459 kb on - strandat 1242.469 kb on + strandat 1242.562 kb on - strandat 1242.600 kb on + strandat 1242.628 kb on - strandat 1242.681 kb on + strandat 1242.681 kb on + strandat 1242.682 kb on - strandat 1242.682 kb on - strandat 1242.714 kb on + strand, within cyaAat 1242.715 kb on - strand, within cyaAat 1242.715 kb on - strand, within cyaAat 1242.719 kb on - strand, within cyaAat 1242.719 kb on - strand, within cyaAat 1242.721 kb on + strand, within cyaAat 1242.722 kb on - strand, within cyaAat 1242.722 kb on - strand, within cyaAat 1242.800 kb on + strand, within cyaAat 1243.003 kb on + strand, within cyaAat 1243.003 kb on + strand, within cyaAat 1243.040 kb on + strand, within cyaAat 1243.061 kb on - strand, within cyaAat 1243.195 kb on - strand, within cyaAat 1243.215 kb on - strand, within cyaA

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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1,241,094 + NOLOHH_06580 0.29 +0.8
1,241,094 + NOLOHH_06580 0.29 +0.5
1,241,094 + NOLOHH_06580 0.29 -0.3
1,241,094 + NOLOHH_06580 0.29 -0.1
1,241,094 + NOLOHH_06580 0.29 +0.6
1,241,095 - NOLOHH_06580 0.29 +0.7
1,241,095 - NOLOHH_06580 0.29 +0.9
1,241,095 - NOLOHH_06580 0.29 -1.0
1,241,096 + NOLOHH_06580 0.29 -0.1
1,241,096 + NOLOHH_06580 0.29 -0.2
1,241,097 - NOLOHH_06580 0.29 +1.1
1,241,097 - NOLOHH_06580 0.29 +0.6
1,241,129 + NOLOHH_06580 0.32 +0.5
1,241,129 + NOLOHH_06580 0.32 -0.3
1,241,129 + NOLOHH_06580 0.32 +0.0
1,241,130 - NOLOHH_06580 0.32 -1.1
1,241,180 + NOLOHH_06580 0.36 +0.7
1,241,181 - NOLOHH_06580 0.36 -0.2
1,241,181 - NOLOHH_06580 0.36 -0.4
1,241,181 - NOLOHH_06580 0.36 -0.3
1,241,181 - NOLOHH_06580 0.36 +1.5
1,241,181 - NOLOHH_06580 0.36 -0.8
1,241,204 + NOLOHH_06580 0.37 -0.6
1,241,214 + NOLOHH_06580 0.38 -0.1
1,241,214 + NOLOHH_06580 0.38 +0.0
1,241,247 - NOLOHH_06580 0.41 +0.5
1,241,247 - NOLOHH_06580 0.41 -0.7
1,241,252 + NOLOHH_06580 0.41 +0.1
1,241,253 - NOLOHH_06580 0.41 -1.0
1,241,257 + NOLOHH_06580 0.41 -0.7
1,241,282 + NOLOHH_06580 0.43 -0.0
1,241,283 - NOLOHH_06580 0.43 -0.1
1,241,294 + NOLOHH_06580 0.44 +0.2
1,241,294 + NOLOHH_06580 0.44 +0.5
1,241,295 - NOLOHH_06580 0.44 +0.5
1,241,295 - NOLOHH_06580 0.44 -0.1
1,241,295 - NOLOHH_06580 0.44 -0.5
1,241,302 + NOLOHH_06580 0.45 -0.1
1,241,316 + NOLOHH_06580 0.46 -0.7
1,241,351 + NOLOHH_06580 0.49 -0.3
1,241,351 + NOLOHH_06580 0.49 -0.2
1,241,352 - NOLOHH_06580 0.49 -0.3
1,241,352 - NOLOHH_06580 0.49 -0.0
1,241,355 + NOLOHH_06580 0.49 -0.9
1,241,359 + NOLOHH_06580 0.49 -0.2
1,241,359 + NOLOHH_06580 0.49 -1.5
1,241,360 - NOLOHH_06580 0.49 +0.5
1,241,497 + NOLOHH_06580 0.60 -0.3
1,241,497 + NOLOHH_06580 0.60 +0.5
1,241,497 + NOLOHH_06580 0.60 +0.3
1,241,546 + NOLOHH_06580 0.63 +0.2
1,241,590 + NOLOHH_06580 0.67 +0.8
1,241,591 - NOLOHH_06580 0.67 +1.5
1,241,591 - NOLOHH_06580 0.67 +0.0
1,241,634 - NOLOHH_06580 0.70 +0.7
1,241,643 + NOLOHH_06580 0.71 -0.2
1,241,644 - NOLOHH_06580 0.71 +0.1
1,241,645 + NOLOHH_06580 0.71 +0.4
1,241,646 - NOLOHH_06580 0.71 -0.1
1,241,646 - NOLOHH_06580 0.71 -1.3
1,241,658 + NOLOHH_06580 0.72 -0.2
1,241,658 + NOLOHH_06580 0.72 -0.3
1,241,658 + NOLOHH_06580 0.72 +0.5
1,241,658 + NOLOHH_06580 0.72 +1.7
1,241,659 - NOLOHH_06580 0.72 +1.1
1,241,659 - NOLOHH_06580 0.72 -0.2
1,241,659 - NOLOHH_06580 0.72 +0.4
1,241,659 - NOLOHH_06580 0.72 -0.3
1,241,701 + NOLOHH_06580 0.75 +1.5
1,241,701 + NOLOHH_06580 0.75 +0.3
1,241,744 + NOLOHH_06580 0.78 -0.7
1,241,744 + NOLOHH_06580 0.78 +0.3
1,241,745 - NOLOHH_06580 0.78 +0.3
1,241,745 - NOLOHH_06580 0.78 +0.9
1,241,745 - NOLOHH_06580 0.78 +1.9
1,241,766 + NOLOHH_06580 0.80 -0.4
1,241,766 + NOLOHH_06580 0.80 +0.4
1,241,766 + NOLOHH_06580 0.80 -1.0
1,241,767 - NOLOHH_06580 0.80 -0.2
1,241,782 + NOLOHH_06580 0.81 +0.2
1,241,782 + NOLOHH_06580 0.81 -0.2
1,241,782 + NOLOHH_06580 0.81 +0.3
1,241,813 + NOLOHH_06580 0.83 -0.6
1,241,828 + NOLOHH_06580 0.85 +1.1
1,241,829 - NOLOHH_06580 0.85 -0.5
1,241,865 + NOLOHH_06580 0.87 +0.5
1,241,865 + NOLOHH_06580 0.87 -1.2
1,241,866 - NOLOHH_06580 0.87 +1.4
1,241,867 + NOLOHH_06580 0.87 +2.1
1,241,867 + NOLOHH_06580 0.87 -0.0
1,241,867 + NOLOHH_06580 0.87 -0.3
1,241,867 + NOLOHH_06580 0.87 -1.5
1,241,867 + NOLOHH_06580 0.87 -0.8
1,241,867 + NOLOHH_06580 0.87 +1.5
1,241,867 + NOLOHH_06580 0.87 -1.1
1,241,867 + NOLOHH_06580 0.87 -0.1
1,241,867 + NOLOHH_06580 0.87 -0.7
1,241,867 + NOLOHH_06580 0.87 -1.8
1,241,867 + NOLOHH_06580 0.87 +0.3
1,241,868 - NOLOHH_06580 0.88 -0.7
1,241,868 - NOLOHH_06580 0.88 +0.8
1,241,868 - NOLOHH_06580 0.88 +0.5
1,241,868 - NOLOHH_06580 0.88 +0.1
1,241,868 - NOLOHH_06580 0.88 -2.3
1,241,868 - NOLOHH_06580 0.88 -1.2
1,241,887 + NOLOHH_06580 0.89 -0.3
1,241,895 - NOLOHH_06580 0.90 +0.8
1,241,966 + -0.3
1,241,966 + -0.7
1,241,966 + +1.5
1,241,966 + +0.2
1,241,966 + +1.5
1,241,967 - -0.1
1,241,967 - -0.2
1,241,967 - +0.8
1,241,967 - -1.2
1,241,969 + -0.2
1,241,969 + -0.3
1,242,045 - -0.9
1,242,062 + +1.1
1,242,063 - -0.8
1,242,073 + -0.6
1,242,073 + -0.3
1,242,073 + +0.5
1,242,073 + -0.1
1,242,073 + +0.0
1,242,073 + +0.0
1,242,193 - cyaY NOLOHH_06585 0.35 +0.2
1,242,202 + cyaY NOLOHH_06585 0.38 -0.5
1,242,202 + cyaY NOLOHH_06585 0.38 +1.1
1,242,203 - cyaY NOLOHH_06585 0.38 -0.0
1,242,203 - cyaY NOLOHH_06585 0.38 -1.1
1,242,203 - cyaY NOLOHH_06585 0.38 +0.5
1,242,229 + cyaY NOLOHH_06585 0.46 -2.3
1,242,298 - cyaY NOLOHH_06585 0.68 -1.8
1,242,298 - cyaY NOLOHH_06585 0.68 -1.1
1,242,298 - cyaY NOLOHH_06585 0.68 +0.5
1,242,415 + -0.5
1,242,450 + -1.1
1,242,458 + -1.0
1,242,459 - +0.0
1,242,459 - -1.8
1,242,459 - -0.4
1,242,469 + -0.5
1,242,562 - -0.5
1,242,600 + -0.5
1,242,628 - -2.0
1,242,681 + -0.5
1,242,681 + -0.3
1,242,682 - -0.7
1,242,682 - +0.3
1,242,714 + cyaA NOLOHH_06590 0.11 -1.1
1,242,715 - cyaA NOLOHH_06590 0.11 +0.1
1,242,715 - cyaA NOLOHH_06590 0.11 +0.6
1,242,719 - cyaA NOLOHH_06590 0.11 -0.5
1,242,719 - cyaA NOLOHH_06590 0.11 -0.2
1,242,721 + cyaA NOLOHH_06590 0.11 -1.1
1,242,722 - cyaA NOLOHH_06590 0.11 -0.1
1,242,722 - cyaA NOLOHH_06590 0.11 +0.5
1,242,800 + cyaA NOLOHH_06590 0.14 +0.5
1,243,003 + cyaA NOLOHH_06590 0.22 +0.1
1,243,003 + cyaA NOLOHH_06590 0.22 +1.5
1,243,040 + cyaA NOLOHH_06590 0.24 +0.5
1,243,061 - cyaA NOLOHH_06590 0.24 -0.5
1,243,195 - cyaA NOLOHH_06590 0.30 -0.5
1,243,215 - cyaA NOLOHH_06590 0.30 -0.5

Or see this region's nucleotide sequence