Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_06580 and cyaY are separated by 47 nucleotides cyaY and cyaA are separated by 39 nucleotides
NOLOHH_06580: NOLOHH_06580 - DKNYY family protein, at 1,240,707 to 1,242,032
_06580
NOLOHH_06585: cyaY - iron donor protein CyaY, at 1,242,080 to 1,242,400
cyaY
NOLOHH_06590: cyaA - class I adenylate cyclase, at 1,242,440 to 1,244,986
cyaA
Position (kb)
1242
1243 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1241.094 kb on + strand, within NOLOHH_06580 at 1241.094 kb on + strand, within NOLOHH_06580 at 1241.094 kb on + strand, within NOLOHH_06580 at 1241.094 kb on + strand, within NOLOHH_06580 at 1241.094 kb on + strand, within NOLOHH_06580 at 1241.095 kb on - strand, within NOLOHH_06580 at 1241.095 kb on - strand, within NOLOHH_06580 at 1241.095 kb on - strand, within NOLOHH_06580 at 1241.096 kb on + strand, within NOLOHH_06580 at 1241.096 kb on + strand, within NOLOHH_06580 at 1241.097 kb on - strand, within NOLOHH_06580 at 1241.097 kb on - strand, within NOLOHH_06580 at 1241.129 kb on + strand, within NOLOHH_06580 at 1241.129 kb on + strand, within NOLOHH_06580 at 1241.129 kb on + strand, within NOLOHH_06580 at 1241.130 kb on - strand, within NOLOHH_06580 at 1241.180 kb on + strand, within NOLOHH_06580 at 1241.181 kb on - strand, within NOLOHH_06580 at 1241.181 kb on - strand, within NOLOHH_06580 at 1241.181 kb on - strand, within NOLOHH_06580 at 1241.181 kb on - strand, within NOLOHH_06580 at 1241.181 kb on - strand, within NOLOHH_06580 at 1241.204 kb on + strand, within NOLOHH_06580 at 1241.214 kb on + strand, within NOLOHH_06580 at 1241.214 kb on + strand, within NOLOHH_06580 at 1241.247 kb on - strand, within NOLOHH_06580 at 1241.247 kb on - strand, within NOLOHH_06580 at 1241.252 kb on + strand, within NOLOHH_06580 at 1241.253 kb on - strand, within NOLOHH_06580 at 1241.257 kb on + strand, within NOLOHH_06580 at 1241.282 kb on + strand, within NOLOHH_06580 at 1241.283 kb on - strand, within NOLOHH_06580 at 1241.294 kb on + strand, within NOLOHH_06580 at 1241.294 kb on + strand, within NOLOHH_06580 at 1241.295 kb on - strand, within NOLOHH_06580 at 1241.295 kb on - strand, within NOLOHH_06580 at 1241.295 kb on - strand, within NOLOHH_06580 at 1241.302 kb on + strand, within NOLOHH_06580 at 1241.316 kb on + strand, within NOLOHH_06580 at 1241.351 kb on + strand, within NOLOHH_06580 at 1241.351 kb on + strand, within NOLOHH_06580 at 1241.352 kb on - strand, within NOLOHH_06580 at 1241.352 kb on - strand, within NOLOHH_06580 at 1241.355 kb on + strand, within NOLOHH_06580 at 1241.359 kb on + strand, within NOLOHH_06580 at 1241.359 kb on + strand, within NOLOHH_06580 at 1241.360 kb on - strand, within NOLOHH_06580 at 1241.497 kb on + strand, within NOLOHH_06580 at 1241.497 kb on + strand, within NOLOHH_06580 at 1241.497 kb on + strand, within NOLOHH_06580 at 1241.546 kb on + strand, within NOLOHH_06580 at 1241.590 kb on + strand, within NOLOHH_06580 at 1241.591 kb on - strand, within NOLOHH_06580 at 1241.591 kb on - strand, within NOLOHH_06580 at 1241.634 kb on - strand, within NOLOHH_06580 at 1241.643 kb on + strand, within NOLOHH_06580 at 1241.644 kb on - strand, within NOLOHH_06580 at 1241.645 kb on + strand, within NOLOHH_06580 at 1241.646 kb on - strand, within NOLOHH_06580 at 1241.646 kb on - strand, within NOLOHH_06580 at 1241.658 kb on + strand, within NOLOHH_06580 at 1241.658 kb on + strand, within NOLOHH_06580 at 1241.658 kb on + strand, within NOLOHH_06580 at 1241.658 kb on + strand, within NOLOHH_06580 at 1241.659 kb on - strand, within NOLOHH_06580 at 1241.659 kb on - strand, within NOLOHH_06580 at 1241.659 kb on - strand, within NOLOHH_06580 at 1241.659 kb on - strand, within NOLOHH_06580 at 1241.701 kb on + strand, within NOLOHH_06580 at 1241.701 kb on + strand, within NOLOHH_06580 at 1241.744 kb on + strand, within NOLOHH_06580 at 1241.744 kb on + strand, within NOLOHH_06580 at 1241.745 kb on - strand, within NOLOHH_06580 at 1241.745 kb on - strand, within NOLOHH_06580 at 1241.745 kb on - strand, within NOLOHH_06580 at 1241.766 kb on + strand, within NOLOHH_06580 at 1241.766 kb on + strand, within NOLOHH_06580 at 1241.766 kb on + strand, within NOLOHH_06580 at 1241.767 kb on - strand, within NOLOHH_06580 at 1241.782 kb on + strand, within NOLOHH_06580 at 1241.782 kb on + strand, within NOLOHH_06580 at 1241.782 kb on + strand, within NOLOHH_06580 at 1241.813 kb on + strand, within NOLOHH_06580 at 1241.828 kb on + strand, within NOLOHH_06580 at 1241.829 kb on - strand, within NOLOHH_06580 at 1241.865 kb on + strand, within NOLOHH_06580 at 1241.865 kb on + strand, within NOLOHH_06580 at 1241.866 kb on - strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.867 kb on + strand, within NOLOHH_06580 at 1241.868 kb on - strand, within NOLOHH_06580 at 1241.868 kb on - strand, within NOLOHH_06580 at 1241.868 kb on - strand, within NOLOHH_06580 at 1241.868 kb on - strand, within NOLOHH_06580 at 1241.868 kb on - strand, within NOLOHH_06580 at 1241.868 kb on - strand, within NOLOHH_06580 at 1241.887 kb on + strand, within NOLOHH_06580 at 1241.895 kb on - strand, within NOLOHH_06580 at 1241.966 kb on + strand at 1241.966 kb on + strand at 1241.966 kb on + strand at 1241.966 kb on + strand at 1241.966 kb on + strand at 1241.967 kb on - strand at 1241.967 kb on - strand at 1241.967 kb on - strand at 1241.967 kb on - strand at 1241.969 kb on + strand at 1241.969 kb on + strand at 1242.045 kb on - strand at 1242.062 kb on + strand at 1242.063 kb on - strand at 1242.073 kb on + strand at 1242.073 kb on + strand at 1242.073 kb on + strand at 1242.073 kb on + strand at 1242.073 kb on + strand at 1242.073 kb on + strand at 1242.193 kb on - strand, within cyaY at 1242.202 kb on + strand, within cyaY at 1242.202 kb on + strand, within cyaY at 1242.203 kb on - strand, within cyaY at 1242.203 kb on - strand, within cyaY at 1242.203 kb on - strand, within cyaY at 1242.229 kb on + strand, within cyaY at 1242.298 kb on - strand, within cyaY at 1242.298 kb on - strand, within cyaY at 1242.298 kb on - strand, within cyaY at 1242.415 kb on + strand at 1242.450 kb on + strand at 1242.458 kb on + strand at 1242.459 kb on - strand at 1242.459 kb on - strand at 1242.459 kb on - strand at 1242.469 kb on + strand at 1242.562 kb on - strand at 1242.600 kb on + strand at 1242.628 kb on - strand at 1242.681 kb on + strand at 1242.681 kb on + strand at 1242.682 kb on - strand at 1242.682 kb on - strand at 1242.714 kb on + strand, within cyaA at 1242.715 kb on - strand, within cyaA at 1242.715 kb on - strand, within cyaA at 1242.719 kb on - strand, within cyaA at 1242.719 kb on - strand, within cyaA at 1242.721 kb on + strand, within cyaA at 1242.722 kb on - strand, within cyaA at 1242.722 kb on - strand, within cyaA at 1242.800 kb on + strand, within cyaA at 1243.003 kb on + strand, within cyaA at 1243.003 kb on + strand, within cyaA at 1243.040 kb on + strand, within cyaA at 1243.061 kb on - strand, within cyaA at 1243.195 kb on - strand, within cyaA at 1243.215 kb on - strand, within cyaA
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 1,241,094 + NOLOHH_06580 0.29 +0.8 1,241,094 + NOLOHH_06580 0.29 +0.5 1,241,094 + NOLOHH_06580 0.29 -0.3 1,241,094 + NOLOHH_06580 0.29 -0.1 1,241,094 + NOLOHH_06580 0.29 +0.6 1,241,095 - NOLOHH_06580 0.29 +0.7 1,241,095 - NOLOHH_06580 0.29 +0.9 1,241,095 - NOLOHH_06580 0.29 -1.0 1,241,096 + NOLOHH_06580 0.29 -0.1 1,241,096 + NOLOHH_06580 0.29 -0.2 1,241,097 - NOLOHH_06580 0.29 +1.1 1,241,097 - NOLOHH_06580 0.29 +0.6 1,241,129 + NOLOHH_06580 0.32 +0.5 1,241,129 + NOLOHH_06580 0.32 -0.3 1,241,129 + NOLOHH_06580 0.32 +0.0 1,241,130 - NOLOHH_06580 0.32 -1.1 1,241,180 + NOLOHH_06580 0.36 +0.7 1,241,181 - NOLOHH_06580 0.36 -0.2 1,241,181 - NOLOHH_06580 0.36 -0.4 1,241,181 - NOLOHH_06580 0.36 -0.3 1,241,181 - NOLOHH_06580 0.36 +1.5 1,241,181 - NOLOHH_06580 0.36 -0.8 1,241,204 + NOLOHH_06580 0.37 -0.6 1,241,214 + NOLOHH_06580 0.38 -0.1 1,241,214 + NOLOHH_06580 0.38 +0.0 1,241,247 - NOLOHH_06580 0.41 +0.5 1,241,247 - NOLOHH_06580 0.41 -0.7 1,241,252 + NOLOHH_06580 0.41 +0.1 1,241,253 - NOLOHH_06580 0.41 -1.0 1,241,257 + NOLOHH_06580 0.41 -0.7 1,241,282 + NOLOHH_06580 0.43 -0.0 1,241,283 - NOLOHH_06580 0.43 -0.1 1,241,294 + NOLOHH_06580 0.44 +0.2 1,241,294 + NOLOHH_06580 0.44 +0.5 1,241,295 - NOLOHH_06580 0.44 +0.5 1,241,295 - NOLOHH_06580 0.44 -0.1 1,241,295 - NOLOHH_06580 0.44 -0.5 1,241,302 + NOLOHH_06580 0.45 -0.1 1,241,316 + NOLOHH_06580 0.46 -0.7 1,241,351 + NOLOHH_06580 0.49 -0.3 1,241,351 + NOLOHH_06580 0.49 -0.2 1,241,352 - NOLOHH_06580 0.49 -0.3 1,241,352 - NOLOHH_06580 0.49 -0.0 1,241,355 + NOLOHH_06580 0.49 -0.9 1,241,359 + NOLOHH_06580 0.49 -0.2 1,241,359 + NOLOHH_06580 0.49 -1.5 1,241,360 - NOLOHH_06580 0.49 +0.5 1,241,497 + NOLOHH_06580 0.60 -0.3 1,241,497 + NOLOHH_06580 0.60 +0.5 1,241,497 + NOLOHH_06580 0.60 +0.3 1,241,546 + NOLOHH_06580 0.63 +0.2 1,241,590 + NOLOHH_06580 0.67 +0.8 1,241,591 - NOLOHH_06580 0.67 +1.5 1,241,591 - NOLOHH_06580 0.67 +0.0 1,241,634 - NOLOHH_06580 0.70 +0.7 1,241,643 + NOLOHH_06580 0.71 -0.2 1,241,644 - NOLOHH_06580 0.71 +0.1 1,241,645 + NOLOHH_06580 0.71 +0.4 1,241,646 - NOLOHH_06580 0.71 -0.1 1,241,646 - NOLOHH_06580 0.71 -1.3 1,241,658 + NOLOHH_06580 0.72 -0.2 1,241,658 + NOLOHH_06580 0.72 -0.3 1,241,658 + NOLOHH_06580 0.72 +0.5 1,241,658 + NOLOHH_06580 0.72 +1.7 1,241,659 - NOLOHH_06580 0.72 +1.1 1,241,659 - NOLOHH_06580 0.72 -0.2 1,241,659 - NOLOHH_06580 0.72 +0.4 1,241,659 - NOLOHH_06580 0.72 -0.3 1,241,701 + NOLOHH_06580 0.75 +1.5 1,241,701 + NOLOHH_06580 0.75 +0.3 1,241,744 + NOLOHH_06580 0.78 -0.7 1,241,744 + NOLOHH_06580 0.78 +0.3 1,241,745 - NOLOHH_06580 0.78 +0.3 1,241,745 - NOLOHH_06580 0.78 +0.9 1,241,745 - NOLOHH_06580 0.78 +1.9 1,241,766 + NOLOHH_06580 0.80 -0.4 1,241,766 + NOLOHH_06580 0.80 +0.4 1,241,766 + NOLOHH_06580 0.80 -1.0 1,241,767 - NOLOHH_06580 0.80 -0.2 1,241,782 + NOLOHH_06580 0.81 +0.2 1,241,782 + NOLOHH_06580 0.81 -0.2 1,241,782 + NOLOHH_06580 0.81 +0.3 1,241,813 + NOLOHH_06580 0.83 -0.6 1,241,828 + NOLOHH_06580 0.85 +1.1 1,241,829 - NOLOHH_06580 0.85 -0.5 1,241,865 + NOLOHH_06580 0.87 +0.5 1,241,865 + NOLOHH_06580 0.87 -1.2 1,241,866 - NOLOHH_06580 0.87 +1.4 1,241,867 + NOLOHH_06580 0.87 +2.1 1,241,867 + NOLOHH_06580 0.87 -0.0 1,241,867 + NOLOHH_06580 0.87 -0.3 1,241,867 + NOLOHH_06580 0.87 -1.5 1,241,867 + NOLOHH_06580 0.87 -0.8 1,241,867 + NOLOHH_06580 0.87 +1.5 1,241,867 + NOLOHH_06580 0.87 -1.1 1,241,867 + NOLOHH_06580 0.87 -0.1 1,241,867 + NOLOHH_06580 0.87 -0.7 1,241,867 + NOLOHH_06580 0.87 -1.8 1,241,867 + NOLOHH_06580 0.87 +0.3 1,241,868 - NOLOHH_06580 0.88 -0.7 1,241,868 - NOLOHH_06580 0.88 +0.8 1,241,868 - NOLOHH_06580 0.88 +0.5 1,241,868 - NOLOHH_06580 0.88 +0.1 1,241,868 - NOLOHH_06580 0.88 -2.3 1,241,868 - NOLOHH_06580 0.88 -1.2 1,241,887 + NOLOHH_06580 0.89 -0.3 1,241,895 - NOLOHH_06580 0.90 +0.8 1,241,966 + -0.3 1,241,966 + -0.7 1,241,966 + +1.5 1,241,966 + +0.2 1,241,966 + +1.5 1,241,967 - -0.1 1,241,967 - -0.2 1,241,967 - +0.8 1,241,967 - -1.2 1,241,969 + -0.2 1,241,969 + -0.3 1,242,045 - -0.9 1,242,062 + +1.1 1,242,063 - -0.8 1,242,073 + -0.6 1,242,073 + -0.3 1,242,073 + +0.5 1,242,073 + -0.1 1,242,073 + +0.0 1,242,073 + +0.0 1,242,193 - cyaY NOLOHH_06585 0.35 +0.2 1,242,202 + cyaY NOLOHH_06585 0.38 -0.5 1,242,202 + cyaY NOLOHH_06585 0.38 +1.1 1,242,203 - cyaY NOLOHH_06585 0.38 -0.0 1,242,203 - cyaY NOLOHH_06585 0.38 -1.1 1,242,203 - cyaY NOLOHH_06585 0.38 +0.5 1,242,229 + cyaY NOLOHH_06585 0.46 -2.3 1,242,298 - cyaY NOLOHH_06585 0.68 -1.8 1,242,298 - cyaY NOLOHH_06585 0.68 -1.1 1,242,298 - cyaY NOLOHH_06585 0.68 +0.5 1,242,415 + -0.5 1,242,450 + -1.1 1,242,458 + -1.0 1,242,459 - +0.0 1,242,459 - -1.8 1,242,459 - -0.4 1,242,469 + -0.5 1,242,562 - -0.5 1,242,600 + -0.5 1,242,628 - -2.0 1,242,681 + -0.5 1,242,681 + -0.3 1,242,682 - -0.7 1,242,682 - +0.3 1,242,714 + cyaA NOLOHH_06590 0.11 -1.1 1,242,715 - cyaA NOLOHH_06590 0.11 +0.1 1,242,715 - cyaA NOLOHH_06590 0.11 +0.6 1,242,719 - cyaA NOLOHH_06590 0.11 -0.5 1,242,719 - cyaA NOLOHH_06590 0.11 -0.2 1,242,721 + cyaA NOLOHH_06590 0.11 -1.1 1,242,722 - cyaA NOLOHH_06590 0.11 -0.1 1,242,722 - cyaA NOLOHH_06590 0.11 +0.5 1,242,800 + cyaA NOLOHH_06590 0.14 +0.5 1,243,003 + cyaA NOLOHH_06590 0.22 +0.1 1,243,003 + cyaA NOLOHH_06590 0.22 +1.5 1,243,040 + cyaA NOLOHH_06590 0.24 +0.5 1,243,061 - cyaA NOLOHH_06590 0.24 -0.5 1,243,195 - cyaA NOLOHH_06590 0.30 -0.5 1,243,215 - cyaA NOLOHH_06590 0.30 -0.5
Or see this region's nucleotide sequence