Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjfZ and rplI are separated by 70 nucleotides rplI and rpsR are separated by 41 nucleotides rpsR and priB are separated by 4 nucleotides priB and rpsF are separated by 6 nucleotides
NOLOHH_04355: yjfZ - Uncharacterized protein YjfZ, at 791,475 to 792,269
yjfZ
NOLOHH_04360: rplI - 50S ribosomal protein L9, at 792,340 to 792,789
rplI
NOLOHH_04365: rpsR - 30S ribosomal protein S18, at 792,831 to 793,058
rpsR
NOLOHH_04370: priB - primosomal replication protein N, at 793,063 to 793,377
priB
NOLOHH_04375: rpsF - 30S ribosomal protein S6, at 793,384 to 793,779
rpsF
Position (kb) 792
793 Strain fitness (log2 ratio) -1
0
1
2
3 at 791.576 kb on + strand, within yjfZ at 791.644 kb on + strand, within yjfZ at 791.672 kb on + strand, within yjfZ at 791.691 kb on - strand, within yjfZ at 791.755 kb on + strand, within yjfZ at 791.778 kb on + strand, within yjfZ at 791.778 kb on + strand, within yjfZ at 791.861 kb on + strand, within yjfZ at 791.898 kb on + strand, within yjfZ at 791.901 kb on - strand, within yjfZ at 791.913 kb on + strand, within yjfZ at 791.914 kb on - strand, within yjfZ at 791.929 kb on + strand, within yjfZ at 791.930 kb on - strand, within yjfZ at 791.934 kb on + strand, within yjfZ at 791.934 kb on + strand, within yjfZ at 791.934 kb on + strand, within yjfZ at 791.942 kb on - strand, within yjfZ at 792.000 kb on + strand, within yjfZ at 792.000 kb on + strand, within yjfZ at 792.000 kb on + strand, within yjfZ at 792.001 kb on - strand, within yjfZ at 792.085 kb on + strand, within yjfZ at 792.109 kb on + strand, within yjfZ at 792.181 kb on + strand, within yjfZ at 792.181 kb on + strand, within yjfZ at 792.181 kb on + strand, within yjfZ at 792.181 kb on + strand, within yjfZ at 792.182 kb on - strand, within yjfZ at 792.194 kb on + strand at 792.195 kb on - strand at 792.226 kb on + strand at 792.226 kb on + strand at 792.226 kb on + strand at 792.226 kb on + strand at 792.226 kb on + strand at 792.227 kb on - strand at 792.227 kb on - strand at 792.255 kb on + strand at 792.255 kb on + strand at 792.267 kb on + strand at 792.270 kb on + strand at 792.271 kb on - strand at 792.353 kb on - strand at 792.482 kb on - strand, within rplI at 792.482 kb on - strand, within rplI at 792.791 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 791,576 + yjfZ NOLOHH_04355 0.13 +0.4 791,644 + yjfZ NOLOHH_04355 0.21 +0.1 791,672 + yjfZ NOLOHH_04355 0.25 -0.3 791,691 - yjfZ NOLOHH_04355 0.27 -0.0 791,755 + yjfZ NOLOHH_04355 0.35 -0.2 791,778 + yjfZ NOLOHH_04355 0.38 -0.9 791,778 + yjfZ NOLOHH_04355 0.38 +1.2 791,861 + yjfZ NOLOHH_04355 0.49 +0.1 791,898 + yjfZ NOLOHH_04355 0.53 +1.2 791,901 - yjfZ NOLOHH_04355 0.54 +0.8 791,913 + yjfZ NOLOHH_04355 0.55 +1.4 791,914 - yjfZ NOLOHH_04355 0.55 +0.2 791,929 + yjfZ NOLOHH_04355 0.57 -0.1 791,930 - yjfZ NOLOHH_04355 0.57 -0.6 791,934 + yjfZ NOLOHH_04355 0.58 +1.0 791,934 + yjfZ NOLOHH_04355 0.58 -0.7 791,934 + yjfZ NOLOHH_04355 0.58 -0.6 791,942 - yjfZ NOLOHH_04355 0.59 +0.9 792,000 + yjfZ NOLOHH_04355 0.66 -0.2 792,000 + yjfZ NOLOHH_04355 0.66 -1.5 792,000 + yjfZ NOLOHH_04355 0.66 +1.0 792,001 - yjfZ NOLOHH_04355 0.66 -0.2 792,085 + yjfZ NOLOHH_04355 0.77 -0.3 792,109 + yjfZ NOLOHH_04355 0.80 +0.1 792,181 + yjfZ NOLOHH_04355 0.89 +0.2 792,181 + yjfZ NOLOHH_04355 0.89 -0.6 792,181 + yjfZ NOLOHH_04355 0.89 -1.6 792,181 + yjfZ NOLOHH_04355 0.89 -0.1 792,182 - yjfZ NOLOHH_04355 0.89 -0.1 792,194 + -0.2 792,195 - -0.4 792,226 + +0.8 792,226 + +1.5 792,226 + -1.1 792,226 + +0.6 792,226 + +0.1 792,227 - -0.2 792,227 - +3.0 792,255 + +0.1 792,255 + +0.8 792,267 + +0.4 792,270 + -0.3 792,271 - -0.1 792,353 - +0.4 792,482 - rplI NOLOHH_04360 0.32 -1.2 792,482 - rplI NOLOHH_04360 0.32 -1.2 792,791 - -1.2
Or see this region's nucleotide sequence