Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt frsA and gpt are separated by 91 nucleotides gpt and pepD are separated by 260 nucleotides
NOLOHH_02065: frsA - esterase FrsA, at 320,578 to 321,822
frsA
NOLOHH_02070: gpt - xanthine phosphoribosyltransferase, at 321,914 to 322,372
gpt
NOLOHH_02075: pepD - cytosol nonspecific dipeptidase, at 322,633 to 324,090
pepD
Position (kb) 321
322
323 Strain fitness (log2 ratio) -2
-1
0
1
2 at 320.972 kb on + strand, within frsA at 320.972 kb on + strand, within frsA at 320.973 kb on - strand, within frsA at 321.047 kb on - strand, within frsA at 321.047 kb on - strand, within frsA at 321.065 kb on - strand, within frsA at 321.065 kb on - strand, within frsA at 321.174 kb on - strand, within frsA at 321.182 kb on + strand, within frsA at 321.182 kb on + strand, within frsA at 321.182 kb on + strand, within frsA at 321.182 kb on + strand, within frsA at 321.183 kb on - strand, within frsA at 321.191 kb on + strand, within frsA at 321.192 kb on - strand, within frsA at 321.195 kb on - strand, within frsA at 321.229 kb on + strand, within frsA at 321.229 kb on + strand, within frsA at 321.229 kb on + strand, within frsA at 321.230 kb on - strand, within frsA at 321.233 kb on - strand, within frsA at 321.264 kb on + strand, within frsA at 321.265 kb on - strand, within frsA at 321.353 kb on + strand, within frsA at 321.367 kb on + strand, within frsA at 321.428 kb on + strand, within frsA at 321.428 kb on + strand, within frsA at 321.428 kb on + strand, within frsA at 321.429 kb on - strand, within frsA at 321.429 kb on - strand, within frsA at 321.429 kb on - strand, within frsA at 321.435 kb on + strand, within frsA at 321.527 kb on + strand, within frsA at 321.561 kb on + strand, within frsA at 321.566 kb on + strand, within frsA at 321.569 kb on - strand, within frsA at 321.569 kb on - strand, within frsA at 321.582 kb on + strand, within frsA at 321.606 kb on + strand, within frsA at 321.606 kb on + strand, within frsA at 321.607 kb on - strand, within frsA at 321.607 kb on - strand, within frsA at 321.607 kb on - strand, within frsA at 321.699 kb on + strand at 321.700 kb on - strand at 321.777 kb on + strand at 321.840 kb on + strand at 321.841 kb on - strand at 321.841 kb on - strand at 321.844 kb on + strand at 321.844 kb on + strand at 321.845 kb on - strand at 321.855 kb on - strand at 321.855 kb on - strand at 321.874 kb on + strand at 322.040 kb on - strand, within gpt at 322.159 kb on + strand, within gpt at 322.159 kb on + strand, within gpt at 322.160 kb on - strand, within gpt at 322.185 kb on + strand, within gpt at 322.185 kb on + strand, within gpt at 322.195 kb on + strand, within gpt at 322.196 kb on - strand, within gpt at 322.196 kb on - strand, within gpt at 322.196 kb on - strand, within gpt at 322.277 kb on - strand, within gpt at 322.322 kb on - strand, within gpt at 322.359 kb on + strand at 322.360 kb on - strand at 322.394 kb on - strand at 322.426 kb on + strand at 322.426 kb on + strand at 322.426 kb on + strand at 322.427 kb on - strand at 322.427 kb on - strand at 322.427 kb on - strand at 322.442 kb on - strand at 322.443 kb on + strand at 322.443 kb on + strand at 322.529 kb on + strand at 322.541 kb on + strand at 322.541 kb on + strand at 322.541 kb on + strand at 322.542 kb on - strand at 322.542 kb on - strand at 322.598 kb on + strand at 322.629 kb on + strand at 322.630 kb on - strand at 322.652 kb on + strand at 322.653 kb on - strand at 322.695 kb on + strand at 322.695 kb on + strand at 322.695 kb on + strand at 322.712 kb on - strand at 322.735 kb on + strand at 322.735 kb on + strand at 322.736 kb on - strand at 322.736 kb on - strand at 322.736 kb on - strand at 322.736 kb on - strand at 322.736 kb on - strand at 322.787 kb on + strand, within pepD at 322.787 kb on + strand, within pepD at 322.787 kb on + strand, within pepD at 322.787 kb on + strand, within pepD at 322.791 kb on + strand, within pepD at 322.792 kb on - strand, within pepD at 322.792 kb on - strand, within pepD at 322.807 kb on - strand, within pepD at 322.850 kb on + strand, within pepD at 322.850 kb on + strand, within pepD at 322.850 kb on + strand, within pepD at 322.884 kb on + strand, within pepD at 322.927 kb on + strand, within pepD at 322.927 kb on + strand, within pepD at 322.927 kb on + strand, within pepD at 322.927 kb on + strand, within pepD at 322.927 kb on + strand, within pepD at 322.928 kb on - strand, within pepD at 322.928 kb on - strand, within pepD at 322.929 kb on + strand, within pepD at 322.929 kb on + strand, within pepD at 322.929 kb on + strand, within pepD at 322.930 kb on - strand, within pepD at 322.930 kb on - strand, within pepD at 322.930 kb on - strand, within pepD at 322.930 kb on - strand, within pepD at 322.930 kb on - strand, within pepD at 323.097 kb on - strand, within pepD at 323.161 kb on + strand, within pepD at 323.161 kb on + strand, within pepD at 323.162 kb on - strand, within pepD at 323.208 kb on - strand, within pepD at 323.255 kb on + strand, within pepD at 323.255 kb on + strand, within pepD at 323.255 kb on + strand, within pepD at 323.255 kb on + strand, within pepD at 323.255 kb on + strand, within pepD at 323.255 kb on + strand, within pepD at 323.322 kb on - strand, within pepD
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 320,972 + frsA NOLOHH_02065 0.32 +0.1 320,972 + frsA NOLOHH_02065 0.32 -2.6 320,973 - frsA NOLOHH_02065 0.32 +0.4 321,047 - frsA NOLOHH_02065 0.38 +0.4 321,047 - frsA NOLOHH_02065 0.38 +0.6 321,065 - frsA NOLOHH_02065 0.39 -0.2 321,065 - frsA NOLOHH_02065 0.39 -1.6 321,174 - frsA NOLOHH_02065 0.48 -0.8 321,182 + frsA NOLOHH_02065 0.49 -0.0 321,182 + frsA NOLOHH_02065 0.49 +0.1 321,182 + frsA NOLOHH_02065 0.49 -0.6 321,182 + frsA NOLOHH_02065 0.49 +0.4 321,183 - frsA NOLOHH_02065 0.49 -0.6 321,191 + frsA NOLOHH_02065 0.49 +0.1 321,192 - frsA NOLOHH_02065 0.49 +1.2 321,195 - frsA NOLOHH_02065 0.50 -0.6 321,229 + frsA NOLOHH_02065 0.52 -0.3 321,229 + frsA NOLOHH_02065 0.52 +1.0 321,229 + frsA NOLOHH_02065 0.52 -0.3 321,230 - frsA NOLOHH_02065 0.52 -0.2 321,233 - frsA NOLOHH_02065 0.53 +1.4 321,264 + frsA NOLOHH_02065 0.55 +0.6 321,265 - frsA NOLOHH_02065 0.55 +0.5 321,353 + frsA NOLOHH_02065 0.62 -0.2 321,367 + frsA NOLOHH_02065 0.63 -0.7 321,428 + frsA NOLOHH_02065 0.68 +0.3 321,428 + frsA NOLOHH_02065 0.68 +0.4 321,428 + frsA NOLOHH_02065 0.68 +0.4 321,429 - frsA NOLOHH_02065 0.68 -0.4 321,429 - frsA NOLOHH_02065 0.68 +0.5 321,429 - frsA NOLOHH_02065 0.68 +1.0 321,435 + frsA NOLOHH_02065 0.69 -0.2 321,527 + frsA NOLOHH_02065 0.76 +0.1 321,561 + frsA NOLOHH_02065 0.79 -0.6 321,566 + frsA NOLOHH_02065 0.79 -0.6 321,569 - frsA NOLOHH_02065 0.80 -0.2 321,569 - frsA NOLOHH_02065 0.80 -0.8 321,582 + frsA NOLOHH_02065 0.81 +1.2 321,606 + frsA NOLOHH_02065 0.83 -0.3 321,606 + frsA NOLOHH_02065 0.83 -0.4 321,607 - frsA NOLOHH_02065 0.83 +0.9 321,607 - frsA NOLOHH_02065 0.83 -0.6 321,607 - frsA NOLOHH_02065 0.83 +0.4 321,699 + -0.3 321,700 - -0.4 321,777 + +0.9 321,840 + -0.4 321,841 - -0.9 321,841 - -1.2 321,844 + -0.4 321,844 + -0.9 321,845 - -0.8 321,855 - +1.2 321,855 - -0.6 321,874 + -2.2 322,040 - gpt NOLOHH_02070 0.27 +1.2 322,159 + gpt NOLOHH_02070 0.53 -1.6 322,159 + gpt NOLOHH_02070 0.53 +0.4 322,160 - gpt NOLOHH_02070 0.54 -0.2 322,185 + gpt NOLOHH_02070 0.59 +0.6 322,185 + gpt NOLOHH_02070 0.59 +0.5 322,195 + gpt NOLOHH_02070 0.61 -0.2 322,196 - gpt NOLOHH_02070 0.61 -0.1 322,196 - gpt NOLOHH_02070 0.61 -1.4 322,196 - gpt NOLOHH_02070 0.61 +0.4 322,277 - gpt NOLOHH_02070 0.79 -0.1 322,322 - gpt NOLOHH_02070 0.89 +0.2 322,359 + +0.5 322,360 - -0.6 322,394 - -0.0 322,426 + +1.1 322,426 + +0.1 322,426 + +1.0 322,427 - +0.6 322,427 - -0.1 322,427 - -0.4 322,442 - -0.4 322,443 + +0.1 322,443 + +0.4 322,529 + +0.9 322,541 + +1.7 322,541 + +0.2 322,541 + -0.5 322,542 - -1.9 322,542 - -0.8 322,598 + +1.0 322,629 + -1.6 322,630 - -0.6 322,652 + -0.0 322,653 - +0.4 322,695 + -0.9 322,695 + -1.2 322,695 + -0.9 322,712 - -0.3 322,735 + +0.4 322,735 + -0.4 322,736 - +2.0 322,736 - +0.1 322,736 - +0.1 322,736 - -1.8 322,736 - -0.5 322,787 + pepD NOLOHH_02075 0.11 -0.8 322,787 + pepD NOLOHH_02075 0.11 +0.4 322,787 + pepD NOLOHH_02075 0.11 +0.2 322,787 + pepD NOLOHH_02075 0.11 +0.4 322,791 + pepD NOLOHH_02075 0.11 -0.0 322,792 - pepD NOLOHH_02075 0.11 -0.4 322,792 - pepD NOLOHH_02075 0.11 -1.6 322,807 - pepD NOLOHH_02075 0.12 -1.0 322,850 + pepD NOLOHH_02075 0.15 -0.5 322,850 + pepD NOLOHH_02075 0.15 +2.7 322,850 + pepD NOLOHH_02075 0.15 -1.9 322,884 + pepD NOLOHH_02075 0.17 +0.4 322,927 + pepD NOLOHH_02075 0.20 +0.3 322,927 + pepD NOLOHH_02075 0.20 -0.6 322,927 + pepD NOLOHH_02075 0.20 +0.7 322,927 + pepD NOLOHH_02075 0.20 -0.9 322,927 + pepD NOLOHH_02075 0.20 -0.1 322,928 - pepD NOLOHH_02075 0.20 -0.2 322,928 - pepD NOLOHH_02075 0.20 +0.4 322,929 + pepD NOLOHH_02075 0.20 +0.6 322,929 + pepD NOLOHH_02075 0.20 +0.4 322,929 + pepD NOLOHH_02075 0.20 -0.2 322,930 - pepD NOLOHH_02075 0.20 -0.4 322,930 - pepD NOLOHH_02075 0.20 -1.5 322,930 - pepD NOLOHH_02075 0.20 -0.6 322,930 - pepD NOLOHH_02075 0.20 -1.0 322,930 - pepD NOLOHH_02075 0.20 -2.2 323,097 - pepD NOLOHH_02075 0.32 -0.1 323,161 + pepD NOLOHH_02075 0.36 -1.2 323,161 + pepD NOLOHH_02075 0.36 -0.7 323,162 - pepD NOLOHH_02075 0.36 +0.4 323,208 - pepD NOLOHH_02075 0.39 -0.2 323,255 + pepD NOLOHH_02075 0.43 +2.0 323,255 + pepD NOLOHH_02075 0.43 -1.0 323,255 + pepD NOLOHH_02075 0.43 +0.1 323,255 + pepD NOLOHH_02075 0.43 -1.2 323,255 + pepD NOLOHH_02075 0.43 -0.7 323,255 + pepD NOLOHH_02075 0.43 +0.2 323,322 - pepD NOLOHH_02075 0.47 +0.7
Or see this region's nucleotide sequence