Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05705

Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_05695 and rpmF are separated by 69 nucleotidesrpmF and fabH are separated by 158 nucleotidesfabH and fabD are separated by 128 nucleotides OKGIIK_05695: OKGIIK_05695 - Large ribosomal RNA subunit accumulation protein YceD, at 1,251,452 to 1,251,925 _05695 OKGIIK_05700: rpmF - 50S ribosomal protein L32, at 1,251,995 to 1,252,189 rpmF OKGIIK_05705: fabH - 3-oxoacyl-ACP synthase, at 1,252,348 to 1,253,322 fabH OKGIIK_05710: fabD - ACP S-malonyltransferase, at 1,253,451 to 1,254,398 fabD Position (kb) 1252 1253 1254Strain fitness (log2 ratio) -2 -1 0 1 2at 1251.398 kb on + strandat 1251.412 kb on + strandat 1251.412 kb on + strandat 1251.412 kb on + strandat 1251.846 kb on + strand, within OKGIIK_05695at 1251.846 kb on + strand, within OKGIIK_05695at 1251.846 kb on + strand, within OKGIIK_05695at 1251.846 kb on + strand, within OKGIIK_05695at 1251.846 kb on + strand, within OKGIIK_05695at 1251.846 kb on + strand, within OKGIIK_05695at 1251.846 kb on + strand, within OKGIIK_05695at 1251.846 kb on + strand, within OKGIIK_05695at 1251.923 kb on + strandat 1251.923 kb on + strandat 1251.923 kb on + strandat 1251.923 kb on + strandat 1251.923 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.328 kb on + strandat 1252.329 kb on - strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.385 kb on + strandat 1253.386 kb on - strandat 1253.386 kb on - strandat 1253.386 kb on - strandat 1253.386 kb on - strandat 1253.386 kb on - strandat 1253.386 kb on - strandat 1253.395 kb on + strandat 1253.396 kb on - strandat 1253.446 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM
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1,251,398 + -1.2
1,251,412 + -0.0
1,251,412 + +0.2
1,251,412 + -0.2
1,251,846 + OKGIIK_05695 0.83 -1.7
1,251,846 + OKGIIK_05695 0.83 +0.1
1,251,846 + OKGIIK_05695 0.83 +0.2
1,251,846 + OKGIIK_05695 0.83 -2.1
1,251,846 + OKGIIK_05695 0.83 -0.6
1,251,846 + OKGIIK_05695 0.83 +0.6
1,251,846 + OKGIIK_05695 0.83 +0.5
1,251,846 + OKGIIK_05695 0.83 -0.7
1,251,923 + -0.9
1,251,923 + +1.1
1,251,923 + -0.2
1,251,923 + -1.4
1,251,923 + +0.1
1,252,328 + -0.2
1,252,328 + -0.1
1,252,328 + +0.0
1,252,328 + -1.4
1,252,328 + +0.2
1,252,328 + +0.9
1,252,328 + -0.2
1,252,328 + +1.2
1,252,328 + +0.1
1,252,328 + +2.4
1,252,328 + -1.1
1,252,328 + +0.8
1,252,328 + -0.4
1,252,329 - -2.7
1,253,385 + -0.6
1,253,385 + +0.2
1,253,385 + +0.9
1,253,385 + -1.6
1,253,385 + +0.3
1,253,385 + -0.6
1,253,385 + -1.1
1,253,385 + -1.7
1,253,385 + +0.1
1,253,385 + -0.5
1,253,385 + +0.5
1,253,385 + -0.7
1,253,386 - -0.5
1,253,386 - -0.5
1,253,386 - +0.5
1,253,386 - +2.4
1,253,386 - -0.9
1,253,386 - +1.3
1,253,395 + -1.2
1,253,396 - -1.2
1,253,446 + -1.5

Or see this region's nucleotide sequence