Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_05695 and rpmF are separated by 69 nucleotides rpmF and fabH are separated by 158 nucleotides fabH and fabD are separated by 128 nucleotides
OKGIIK_05695: OKGIIK_05695 - Large ribosomal RNA subunit accumulation protein YceD, at 1,251,452 to 1,251,925
_05695
OKGIIK_05700: rpmF - 50S ribosomal protein L32, at 1,251,995 to 1,252,189
rpmF
OKGIIK_05705: fabH - 3-oxoacyl-ACP synthase, at 1,252,348 to 1,253,322
fabH
OKGIIK_05710: fabD - ACP S-malonyltransferase, at 1,253,451 to 1,254,398
fabD
Position (kb)
1252
1253
1254 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1251.398 kb on + strand at 1251.412 kb on + strand at 1251.412 kb on + strand at 1251.412 kb on + strand at 1251.846 kb on + strand, within OKGIIK_05695 at 1251.846 kb on + strand, within OKGIIK_05695 at 1251.846 kb on + strand, within OKGIIK_05695 at 1251.846 kb on + strand, within OKGIIK_05695 at 1251.846 kb on + strand, within OKGIIK_05695 at 1251.846 kb on + strand, within OKGIIK_05695 at 1251.846 kb on + strand, within OKGIIK_05695 at 1251.846 kb on + strand, within OKGIIK_05695 at 1251.923 kb on + strand at 1251.923 kb on + strand at 1251.923 kb on + strand at 1251.923 kb on + strand at 1251.923 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.328 kb on + strand at 1252.329 kb on - strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.385 kb on + strand at 1253.386 kb on - strand at 1253.386 kb on - strand at 1253.386 kb on - strand at 1253.386 kb on - strand at 1253.386 kb on - strand at 1253.386 kb on - strand at 1253.395 kb on + strand at 1253.396 kb on - strand at 1253.446 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM remove 1,251,398 + -1.2 1,251,412 + -0.0 1,251,412 + +0.2 1,251,412 + -0.2 1,251,846 + OKGIIK_05695 0.83 -1.7 1,251,846 + OKGIIK_05695 0.83 +0.1 1,251,846 + OKGIIK_05695 0.83 +0.2 1,251,846 + OKGIIK_05695 0.83 -2.1 1,251,846 + OKGIIK_05695 0.83 -0.6 1,251,846 + OKGIIK_05695 0.83 +0.6 1,251,846 + OKGIIK_05695 0.83 +0.5 1,251,846 + OKGIIK_05695 0.83 -0.7 1,251,923 + -0.9 1,251,923 + +1.1 1,251,923 + -0.2 1,251,923 + -1.4 1,251,923 + +0.1 1,252,328 + -0.2 1,252,328 + -0.1 1,252,328 + +0.0 1,252,328 + -1.4 1,252,328 + +0.2 1,252,328 + +0.9 1,252,328 + -0.2 1,252,328 + +1.2 1,252,328 + +0.1 1,252,328 + +2.4 1,252,328 + -1.1 1,252,328 + +0.8 1,252,328 + -0.4 1,252,329 - -2.7 1,253,385 + -0.6 1,253,385 + +0.2 1,253,385 + +0.9 1,253,385 + -1.6 1,253,385 + +0.3 1,253,385 + -0.6 1,253,385 + -1.1 1,253,385 + -1.7 1,253,385 + +0.1 1,253,385 + -0.5 1,253,385 + +0.5 1,253,385 + -0.7 1,253,386 - -0.5 1,253,386 - -0.5 1,253,386 - +0.5 1,253,386 - +2.4 1,253,386 - -0.9 1,253,386 - +1.3 1,253,395 + -1.2 1,253,396 - -1.2 1,253,446 + -1.5
Or see this region's nucleotide sequence