Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhiN and mmsB are separated by 84 nucleotides mmsB and yHI9 are separated by 112 nucleotides
OKGIIK_03505: yhiN - NAD(P)/FAD-dependent oxidoreductase, at 778,452 to 779,630
yhiN
OKGIIK_03510: mmsB - 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase, at 779,715 to 780,599
mmsB
OKGIIK_03515: yHI9 - PhzF family phenazine biosynthesis protein, at 780,712 to 781,590
yHI9
Position (kb) 779
780
781 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 778.725 kb on + strand, within yhiN at 778.726 kb on - strand, within yhiN at 779.058 kb on + strand, within yhiN at 779.059 kb on - strand, within yhiN at 779.059 kb on - strand, within yhiN at 779.184 kb on + strand, within yhiN at 779.185 kb on - strand, within yhiN at 779.532 kb on + strand at 779.532 kb on + strand at 779.532 kb on + strand at 779.532 kb on + strand at 779.532 kb on + strand at 779.532 kb on + strand at 779.532 kb on + strand at 779.533 kb on - strand at 779.533 kb on - strand at 779.533 kb on - strand at 779.533 kb on - strand at 779.533 kb on - strand at 779.533 kb on - strand at 779.577 kb on + strand at 779.577 kb on + strand at 779.578 kb on - strand at 779.578 kb on - strand at 779.668 kb on - strand at 780.052 kb on - strand, within mmsB at 780.052 kb on - strand, within mmsB at 780.052 kb on - strand, within mmsB at 780.052 kb on - strand, within mmsB at 780.052 kb on - strand, within mmsB at 780.068 kb on - strand, within mmsB at 780.107 kb on + strand, within mmsB at 780.108 kb on - strand, within mmsB at 780.214 kb on + strand, within mmsB at 780.214 kb on + strand, within mmsB at 780.214 kb on + strand, within mmsB at 780.215 kb on - strand, within mmsB at 780.291 kb on + strand, within mmsB at 780.292 kb on - strand, within mmsB at 780.354 kb on + strand, within mmsB at 780.627 kb on - strand at 780.627 kb on - strand at 780.627 kb on - strand at 780.695 kb on + strand at 780.713 kb on + strand at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.839 kb on + strand, within yHI9 at 780.840 kb on - strand, within yHI9 at 780.840 kb on - strand, within yHI9 at 780.840 kb on - strand, within yHI9 at 780.881 kb on + strand, within yHI9 at 780.881 kb on + strand, within yHI9 at 780.881 kb on + strand, within yHI9 at 780.881 kb on + strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.882 kb on - strand, within yHI9 at 780.968 kb on + strand, within yHI9 at 780.969 kb on - strand, within yHI9 at 780.969 kb on - strand, within yHI9 at 780.969 kb on - strand, within yHI9 at 781.202 kb on - strand, within yHI9 at 781.202 kb on - strand, within yHI9 at 781.410 kb on - strand, within yHI9 at 781.410 kb on - strand, within yHI9 at 781.574 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM remove 778,725 + yhiN OKGIIK_03505 0.23 +0.4 778,726 - yhiN OKGIIK_03505 0.23 -0.2 779,058 + yhiN OKGIIK_03505 0.51 +0.1 779,059 - yhiN OKGIIK_03505 0.51 -0.6 779,059 - yhiN OKGIIK_03505 0.51 +0.1 779,184 + yhiN OKGIIK_03505 0.62 -0.8 779,185 - yhiN OKGIIK_03505 0.62 +1.1 779,532 + -1.7 779,532 + -0.5 779,532 + +0.8 779,532 + -0.1 779,532 + -0.2 779,532 + -0.5 779,532 + +0.5 779,533 - +0.1 779,533 - -0.6 779,533 - -1.7 779,533 - +0.6 779,533 - -0.6 779,533 - -2.8 779,577 + -0.1 779,577 + -1.8 779,578 - -0.4 779,578 - +0.1 779,668 - -1.2 780,052 - mmsB OKGIIK_03510 0.38 +0.5 780,052 - mmsB OKGIIK_03510 0.38 +0.3 780,052 - mmsB OKGIIK_03510 0.38 -0.1 780,052 - mmsB OKGIIK_03510 0.38 +0.9 780,052 - mmsB OKGIIK_03510 0.38 +0.3 780,068 - mmsB OKGIIK_03510 0.40 -0.2 780,107 + mmsB OKGIIK_03510 0.44 -0.4 780,108 - mmsB OKGIIK_03510 0.44 -2.1 780,214 + mmsB OKGIIK_03510 0.56 -0.4 780,214 + mmsB OKGIIK_03510 0.56 -0.2 780,214 + mmsB OKGIIK_03510 0.56 +0.1 780,215 - mmsB OKGIIK_03510 0.56 -0.5 780,291 + mmsB OKGIIK_03510 0.65 +0.5 780,292 - mmsB OKGIIK_03510 0.65 +2.3 780,354 + mmsB OKGIIK_03510 0.72 +0.1 780,627 - -1.1 780,627 - +0.4 780,627 - +1.7 780,695 + +0.1 780,713 + -1.8 780,839 + yHI9 OKGIIK_03515 0.14 -1.2 780,839 + yHI9 OKGIIK_03515 0.14 +0.7 780,839 + yHI9 OKGIIK_03515 0.14 -0.5 780,839 + yHI9 OKGIIK_03515 0.14 +0.1 780,839 + yHI9 OKGIIK_03515 0.14 +0.3 780,839 + yHI9 OKGIIK_03515 0.14 +0.6 780,840 - yHI9 OKGIIK_03515 0.15 +0.5 780,840 - yHI9 OKGIIK_03515 0.15 +0.2 780,840 - yHI9 OKGIIK_03515 0.15 -0.6 780,881 + yHI9 OKGIIK_03515 0.19 -0.3 780,881 + yHI9 OKGIIK_03515 0.19 +0.2 780,881 + yHI9 OKGIIK_03515 0.19 -0.7 780,881 + yHI9 OKGIIK_03515 0.19 +0.4 780,882 - yHI9 OKGIIK_03515 0.19 -1.5 780,882 - yHI9 OKGIIK_03515 0.19 -1.2 780,882 - yHI9 OKGIIK_03515 0.19 +0.1 780,882 - yHI9 OKGIIK_03515 0.19 +0.6 780,882 - yHI9 OKGIIK_03515 0.19 -0.4 780,882 - yHI9 OKGIIK_03515 0.19 +1.1 780,882 - yHI9 OKGIIK_03515 0.19 -0.5 780,882 - yHI9 OKGIIK_03515 0.19 +0.8 780,968 + yHI9 OKGIIK_03515 0.29 -0.2 780,969 - yHI9 OKGIIK_03515 0.29 -0.2 780,969 - yHI9 OKGIIK_03515 0.29 +2.7 780,969 - yHI9 OKGIIK_03515 0.29 -0.3 781,202 - yHI9 OKGIIK_03515 0.56 +1.7 781,202 - yHI9 OKGIIK_03515 0.56 +1.0 781,410 - yHI9 OKGIIK_03515 0.79 -1.1 781,410 - yHI9 OKGIIK_03515 0.79 -0.2 781,574 + -0.4
Or see this region's nucleotide sequence