Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_00630 and ompR overlap by 1 nucleotides ompR and baeS overlap by 53 nucleotides baeS and mtfA are separated by 10 nucleotides mtfA and OKGIIK_00650 are separated by 12 nucleotides
OKGIIK_00630: OKGIIK_00630 - PepSY domain-containing protein, at 143,541 to 143,900
_00630
OKGIIK_00635: ompR - DNA-binding response regulator, at 143,900 to 144,592
ompR
OKGIIK_00640: baeS - two-component sensor histidine kinase, at 144,540 to 145,976
baeS
OKGIIK_00645: mtfA - Mlc titration factor MtfA, regulates ptsG expression, at 145,987 to 146,781
mtfA
OKGIIK_00650: OKGIIK_00650 - hypothetical protein, at 146,794 to 147,117
_00650
Position (kb) 144
145
146 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 143.722 kb on - strand, within OKGIIK_00630 at 143.722 kb on - strand, within OKGIIK_00630 at 143.734 kb on + strand, within OKGIIK_00630 at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 146.042 kb on + strand at 146.042 kb on + strand at 146.042 kb on + strand at 146.043 kb on - strand at 146.043 kb on - strand at 146.043 kb on - strand at 146.043 kb on - strand at 146.043 kb on - strand at 146.043 kb on - strand at 146.043 kb on - strand at 146.105 kb on + strand, within mtfA at 146.105 kb on + strand, within mtfA at 146.105 kb on + strand, within mtfA at 146.105 kb on + strand, within mtfA at 146.106 kb on - strand, within mtfA at 146.106 kb on - strand, within mtfA at 146.106 kb on - strand, within mtfA at 146.106 kb on - strand, within mtfA at 146.132 kb on + strand, within mtfA at 146.132 kb on + strand, within mtfA at 146.132 kb on + strand, within mtfA at 146.132 kb on + strand, within mtfA at 146.133 kb on - strand, within mtfA at 146.133 kb on - strand, within mtfA at 146.133 kb on - strand, within mtfA at 146.156 kb on + strand, within mtfA at 146.156 kb on + strand, within mtfA at 146.156 kb on + strand, within mtfA at 146.156 kb on + strand, within mtfA at 146.156 kb on + strand, within mtfA at 146.157 kb on - strand, within mtfA at 146.157 kb on - strand, within mtfA at 146.178 kb on - strand, within mtfA at 146.178 kb on - strand, within mtfA at 146.210 kb on + strand, within mtfA at 146.210 kb on + strand, within mtfA at 146.210 kb on + strand, within mtfA at 146.210 kb on + strand, within mtfA at 146.210 kb on + strand, within mtfA at 146.210 kb on + strand, within mtfA at 146.210 kb on + strand, within mtfA at 146.211 kb on - strand, within mtfA at 146.211 kb on - strand, within mtfA at 146.211 kb on - strand, within mtfA at 146.211 kb on - strand, within mtfA at 146.211 kb on - strand, within mtfA at 146.211 kb on - strand, within mtfA at 146.211 kb on - strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.330 kb on + strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.331 kb on - strand, within mtfA at 146.489 kb on + strand, within mtfA at 146.489 kb on + strand, within mtfA at 146.489 kb on + strand, within mtfA at 146.489 kb on + strand, within mtfA at 146.490 kb on - strand, within mtfA at 146.490 kb on - strand, within mtfA at 146.490 kb on - strand, within mtfA at 146.490 kb on - strand, within mtfA at 146.490 kb on - strand, within mtfA at 146.490 kb on - strand, within mtfA at 146.490 kb on - strand, within mtfA at 146.490 kb on - strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.579 kb on + strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.580 kb on - strand, within mtfA at 146.795 kb on + strand at 146.795 kb on + strand at 146.795 kb on + strand at 146.796 kb on - strand at 146.796 kb on - strand at 146.796 kb on - strand at 146.796 kb on - strand at 146.796 kb on - strand at 146.796 kb on - strand at 146.796 kb on - strand at 146.796 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM remove 143,722 - OKGIIK_00630 0.50 +1.1 143,722 - OKGIIK_00630 0.50 -0.6 143,734 + OKGIIK_00630 0.54 -0.6 143,878 + -0.8 143,878 + -1.7 143,878 + +0.4 143,878 + -0.6 143,878 + -1.4 143,878 + -0.3 143,878 + +0.9 143,878 + -0.3 143,878 + -0.7 143,878 + -0.1 143,878 + -0.1 143,878 + -0.5 143,878 + -0.6 143,878 + +0.4 146,042 + +0.9 146,042 + -1.4 146,042 + +0.3 146,043 - -0.7 146,043 - -0.7 146,043 - +0.2 146,043 - +0.6 146,043 - -0.6 146,043 - -0.4 146,043 - -1.6 146,105 + mtfA OKGIIK_00645 0.15 +1.0 146,105 + mtfA OKGIIK_00645 0.15 -1.0 146,105 + mtfA OKGIIK_00645 0.15 -0.9 146,105 + mtfA OKGIIK_00645 0.15 -2.3 146,106 - mtfA OKGIIK_00645 0.15 -0.4 146,106 - mtfA OKGIIK_00645 0.15 -1.9 146,106 - mtfA OKGIIK_00645 0.15 -0.6 146,106 - mtfA OKGIIK_00645 0.15 +1.4 146,132 + mtfA OKGIIK_00645 0.18 -1.4 146,132 + mtfA OKGIIK_00645 0.18 -0.6 146,132 + mtfA OKGIIK_00645 0.18 -1.1 146,132 + mtfA OKGIIK_00645 0.18 -0.6 146,133 - mtfA OKGIIK_00645 0.18 -0.6 146,133 - mtfA OKGIIK_00645 0.18 -0.8 146,133 - mtfA OKGIIK_00645 0.18 -0.1 146,156 + mtfA OKGIIK_00645 0.21 +0.1 146,156 + mtfA OKGIIK_00645 0.21 -0.9 146,156 + mtfA OKGIIK_00645 0.21 -0.9 146,156 + mtfA OKGIIK_00645 0.21 -0.6 146,156 + mtfA OKGIIK_00645 0.21 -1.7 146,157 - mtfA OKGIIK_00645 0.21 +1.0 146,157 - mtfA OKGIIK_00645 0.21 -2.5 146,178 - mtfA OKGIIK_00645 0.24 +0.6 146,178 - mtfA OKGIIK_00645 0.24 +0.1 146,210 + mtfA OKGIIK_00645 0.28 -0.7 146,210 + mtfA OKGIIK_00645 0.28 -0.1 146,210 + mtfA OKGIIK_00645 0.28 -0.9 146,210 + mtfA OKGIIK_00645 0.28 -0.3 146,210 + mtfA OKGIIK_00645 0.28 -0.6 146,210 + mtfA OKGIIK_00645 0.28 -0.6 146,210 + mtfA OKGIIK_00645 0.28 +0.4 146,211 - mtfA OKGIIK_00645 0.28 +0.6 146,211 - mtfA OKGIIK_00645 0.28 -0.3 146,211 - mtfA OKGIIK_00645 0.28 +0.6 146,211 - mtfA OKGIIK_00645 0.28 -0.0 146,211 - mtfA OKGIIK_00645 0.28 -0.9 146,211 - mtfA OKGIIK_00645 0.28 -1.4 146,211 - mtfA OKGIIK_00645 0.28 +1.4 146,330 + mtfA OKGIIK_00645 0.43 +1.0 146,330 + mtfA OKGIIK_00645 0.43 -0.9 146,330 + mtfA OKGIIK_00645 0.43 -0.1 146,330 + mtfA OKGIIK_00645 0.43 -0.8 146,330 + mtfA OKGIIK_00645 0.43 -0.6 146,330 + mtfA OKGIIK_00645 0.43 +0.4 146,330 + mtfA OKGIIK_00645 0.43 -0.1 146,330 + mtfA OKGIIK_00645 0.43 +0.0 146,330 + mtfA OKGIIK_00645 0.43 -0.9 146,330 + mtfA OKGIIK_00645 0.43 -0.9 146,331 - mtfA OKGIIK_00645 0.43 -0.8 146,331 - mtfA OKGIIK_00645 0.43 -1.9 146,331 - mtfA OKGIIK_00645 0.43 -0.4 146,331 - mtfA OKGIIK_00645 0.43 -0.6 146,331 - mtfA OKGIIK_00645 0.43 -2.0 146,331 - mtfA OKGIIK_00645 0.43 -0.0 146,331 - mtfA OKGIIK_00645 0.43 -0.6 146,331 - mtfA OKGIIK_00645 0.43 -1.4 146,331 - mtfA OKGIIK_00645 0.43 -0.4 146,331 - mtfA OKGIIK_00645 0.43 -0.6 146,331 - mtfA OKGIIK_00645 0.43 -0.1 146,331 - mtfA OKGIIK_00645 0.43 -1.1 146,489 + mtfA OKGIIK_00645 0.63 -0.7 146,489 + mtfA OKGIIK_00645 0.63 -1.4 146,489 + mtfA OKGIIK_00645 0.63 -1.1 146,489 + mtfA OKGIIK_00645 0.63 -0.9 146,490 - mtfA OKGIIK_00645 0.63 +0.4 146,490 - mtfA OKGIIK_00645 0.63 -1.1 146,490 - mtfA OKGIIK_00645 0.63 -0.6 146,490 - mtfA OKGIIK_00645 0.63 -0.6 146,490 - mtfA OKGIIK_00645 0.63 -1.1 146,490 - mtfA OKGIIK_00645 0.63 -0.9 146,490 - mtfA OKGIIK_00645 0.63 -1.1 146,490 - mtfA OKGIIK_00645 0.63 -0.3 146,579 + mtfA OKGIIK_00645 0.74 -0.6 146,579 + mtfA OKGIIK_00645 0.74 -1.1 146,579 + mtfA OKGIIK_00645 0.74 -0.1 146,579 + mtfA OKGIIK_00645 0.74 +0.0 146,579 + mtfA OKGIIK_00645 0.74 -1.4 146,579 + mtfA OKGIIK_00645 0.74 -2.4 146,579 + mtfA OKGIIK_00645 0.74 +0.4 146,579 + mtfA OKGIIK_00645 0.74 -0.8 146,579 + mtfA OKGIIK_00645 0.74 -0.9 146,579 + mtfA OKGIIK_00645 0.74 -0.4 146,579 + mtfA OKGIIK_00645 0.74 -3.1 146,579 + mtfA OKGIIK_00645 0.74 -1.7 146,580 - mtfA OKGIIK_00645 0.75 -0.6 146,580 - mtfA OKGIIK_00645 0.75 +1.2 146,580 - mtfA OKGIIK_00645 0.75 -2.4 146,580 - mtfA OKGIIK_00645 0.75 -2.0 146,580 - mtfA OKGIIK_00645 0.75 -0.4 146,580 - mtfA OKGIIK_00645 0.75 -1.6 146,580 - mtfA OKGIIK_00645 0.75 +0.4 146,580 - mtfA OKGIIK_00645 0.75 -0.0 146,580 - mtfA OKGIIK_00645 0.75 +0.2 146,795 + -0.9 146,795 + -1.3 146,795 + -1.7 146,796 - +0.1 146,796 - -2.6 146,796 - -1.3 146,796 - -0.6 146,796 - -2.7 146,796 - -0.4 146,796 - -0.0 146,796 - -1.1
Or see this region's nucleotide sequence