Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06868 and MPMX19_06869 are separated by 247 nucleotides MPMX19_06869 and MPMX19_06870 are separated by 82 nucleotides
MPMX19_06868: MPMX19_06868 - hypothetical protein, at 137,801 to 139,618
_06868
MPMX19_06869: MPMX19_06869 - NADH:FAD oxidoreductase, at 139,866 to 140,396
_06869
MPMX19_06870: MPMX19_06870 - Riboflavin biosynthesis protein RibBA, at 140,479 to 141,606
_06870
Position (kb)
139
140
141 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 138.870 kb on + strand, within MPMX19_06868 at 138.871 kb on - strand, within MPMX19_06868 at 139.101 kb on + strand, within MPMX19_06868 at 139.102 kb on - strand, within MPMX19_06868 at 139.102 kb on - strand, within MPMX19_06868 at 139.102 kb on - strand, within MPMX19_06868 at 139.102 kb on - strand, within MPMX19_06868 at 139.102 kb on - strand, within MPMX19_06868 at 139.102 kb on - strand, within MPMX19_06868 at 139.176 kb on + strand, within MPMX19_06868 at 139.176 kb on + strand, within MPMX19_06868 at 139.177 kb on - strand, within MPMX19_06868 at 139.230 kb on + strand, within MPMX19_06868 at 139.230 kb on + strand, within MPMX19_06868 at 139.231 kb on - strand, within MPMX19_06868 at 139.332 kb on + strand, within MPMX19_06868 at 139.332 kb on + strand, within MPMX19_06868 at 139.332 kb on + strand, within MPMX19_06868 at 139.332 kb on + strand, within MPMX19_06868 at 139.332 kb on + strand, within MPMX19_06868 at 139.332 kb on + strand, within MPMX19_06868 at 139.333 kb on - strand, within MPMX19_06868 at 139.333 kb on - strand, within MPMX19_06868 at 139.562 kb on + strand at 139.562 kb on + strand at 139.607 kb on + strand at 139.607 kb on + strand at 139.608 kb on - strand at 139.608 kb on - strand at 139.608 kb on - strand at 139.608 kb on - strand at 139.845 kb on + strand at 139.845 kb on + strand at 139.846 kb on - strand at 139.846 kb on - strand at 139.867 kb on + strand at 139.868 kb on - strand at 139.868 kb on - strand at 139.976 kb on + strand, within MPMX19_06869 at 140.379 kb on + strand at 140.379 kb on + strand at 140.380 kb on - strand at 140.380 kb on - strand at 140.532 kb on - strand at 140.624 kb on + strand, within MPMX19_06870 at 140.624 kb on + strand, within MPMX19_06870 at 140.624 kb on + strand, within MPMX19_06870 at 140.624 kb on + strand, within MPMX19_06870 at 140.625 kb on - strand, within MPMX19_06870 at 140.625 kb on - strand, within MPMX19_06870 at 140.625 kb on - strand, within MPMX19_06870 at 140.625 kb on - strand, within MPMX19_06870 at 140.625 kb on - strand, within MPMX19_06870 at 141.147 kb on + strand, within MPMX19_06870 at 141.147 kb on + strand, within MPMX19_06870 at 141.147 kb on + strand, within MPMX19_06870 at 141.148 kb on - strand, within MPMX19_06870 at 141.148 kb on - strand, within MPMX19_06870 at 141.148 kb on - strand, within MPMX19_06870 at 141.148 kb on - strand, within MPMX19_06870 at 141.148 kb on - strand, within MPMX19_06870 at 141.148 kb on - strand, within MPMX19_06870 at 141.216 kb on + strand, within MPMX19_06870 at 141.216 kb on + strand, within MPMX19_06870 at 141.216 kb on + strand, within MPMX19_06870 at 141.216 kb on + strand, within MPMX19_06870 at 141.217 kb on - strand, within MPMX19_06870 at 141.217 kb on - strand, within MPMX19_06870 at 141.217 kb on - strand, within MPMX19_06870 at 141.217 kb on - strand, within MPMX19_06870
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 138,870 + MPMX19_06868 0.59 -0.0 138,871 - MPMX19_06868 0.59 -0.2 139,101 + MPMX19_06868 0.72 +1.9 139,102 - MPMX19_06868 0.72 -0.9 139,102 - MPMX19_06868 0.72 +0.5 139,102 - MPMX19_06868 0.72 -0.9 139,102 - MPMX19_06868 0.72 -0.3 139,102 - MPMX19_06868 0.72 -1.1 139,102 - MPMX19_06868 0.72 -0.5 139,176 + MPMX19_06868 0.76 -1.1 139,176 + MPMX19_06868 0.76 -0.8 139,177 - MPMX19_06868 0.76 +1.1 139,230 + MPMX19_06868 0.79 -0.6 139,230 + MPMX19_06868 0.79 -1.9 139,231 - MPMX19_06868 0.79 +0.9 139,332 + MPMX19_06868 0.84 +0.1 139,332 + MPMX19_06868 0.84 +0.4 139,332 + MPMX19_06868 0.84 -1.2 139,332 + MPMX19_06868 0.84 -1.4 139,332 + MPMX19_06868 0.84 -0.3 139,332 + MPMX19_06868 0.84 +0.7 139,333 - MPMX19_06868 0.84 +0.3 139,333 - MPMX19_06868 0.84 -1.9 139,562 + -0.1 139,562 + -1.3 139,607 + -1.7 139,607 + -2.6 139,608 - -1.0 139,608 - -0.5 139,608 - -2.7 139,608 - -0.3 139,845 + -0.3 139,845 + +1.5 139,846 - -0.9 139,846 - -0.8 139,867 + -0.1 139,868 - +1.5 139,868 - -0.2 139,976 + MPMX19_06869 0.21 +0.9 140,379 + -0.4 140,379 + +0.5 140,380 - +0.1 140,380 - -0.9 140,532 - -1.2 140,624 + MPMX19_06870 0.13 -1.2 140,624 + MPMX19_06870 0.13 +0.5 140,624 + MPMX19_06870 0.13 +0.4 140,624 + MPMX19_06870 0.13 -0.5 140,625 - MPMX19_06870 0.13 -0.3 140,625 - MPMX19_06870 0.13 +1.3 140,625 - MPMX19_06870 0.13 +0.7 140,625 - MPMX19_06870 0.13 -0.5 140,625 - MPMX19_06870 0.13 -0.1 141,147 + MPMX19_06870 0.59 +2.1 141,147 + MPMX19_06870 0.59 +0.5 141,147 + MPMX19_06870 0.59 -2.3 141,148 - MPMX19_06870 0.59 -0.7 141,148 - MPMX19_06870 0.59 -0.8 141,148 - MPMX19_06870 0.59 -0.9 141,148 - MPMX19_06870 0.59 +0.5 141,148 - MPMX19_06870 0.59 -0.7 141,148 - MPMX19_06870 0.59 +0.1 141,216 + MPMX19_06870 0.65 -0.8 141,216 + MPMX19_06870 0.65 -0.0 141,216 + MPMX19_06870 0.65 -0.9 141,216 + MPMX19_06870 0.65 -1.7 141,217 - MPMX19_06870 0.65 -0.4 141,217 - MPMX19_06870 0.65 -2.4 141,217 - MPMX19_06870 0.65 +0.1 141,217 - MPMX19_06870 0.65 +1.1
Or see this region's nucleotide sequence