Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06739 and MPMX19_06740 overlap by 4 nucleotides MPMX19_06740 and MPMX19_06741 are separated by 409 nucleotides MPMX19_06741 and MPMX19_06742 are separated by 4 nucleotides MPMX19_06742 and MPMX19_06743 overlap by 4 nucleotides
MPMX19_06739: MPMX19_06739 - hypothetical protein, at 3,831 to 5,192
_06739
MPMX19_06740: MPMX19_06740 - hypothetical protein, at 5,189 to 5,743
_06740
MPMX19_06741: MPMX19_06741 - hypothetical protein, at 6,153 to 6,431
_06741
MPMX19_06742: MPMX19_06742 - Chemotaxis protein CheY, at 6,436 to 6,804
_06742
MPMX19_06743: MPMX19_06743 - Chemotaxis protein CheA, at 6,801 to 8,792
_06743
Position (kb) 6
7 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5.187 kb on - strand at 5.187 kb on - strand at 5.187 kb on - strand at 5.187 kb on - strand at 5.235 kb on + strand at 5.235 kb on + strand at 5.236 kb on - strand at 5.236 kb on - strand at 5.236 kb on - strand at 5.774 kb on + strand at 5.774 kb on + strand at 5.774 kb on + strand at 5.774 kb on + strand at 5.775 kb on - strand at 5.775 kb on - strand at 5.775 kb on - strand at 5.775 kb on - strand at 5.944 kb on + strand at 5.944 kb on + strand at 5.945 kb on - strand at 5.949 kb on + strand at 5.950 kb on - strand at 5.950 kb on - strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.957 kb on - strand at 5.957 kb on - strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 6.266 kb on - strand, within MPMX19_06741 at 6.432 kb on + strand at 6.433 kb on - strand at 6.433 kb on - strand at 6.449 kb on + strand at 6.449 kb on + strand at 6.449 kb on + strand at 6.449 kb on + strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.450 kb on - strand at 6.452 kb on + strand at 6.452 kb on + strand at 6.452 kb on + strand at 6.452 kb on + strand at 6.609 kb on + strand, within MPMX19_06742 at 6.609 kb on + strand, within MPMX19_06742 at 7.086 kb on - strand, within MPMX19_06743 at 7.086 kb on - strand, within MPMX19_06743 at 7.086 kb on - strand, within MPMX19_06743 at 7.086 kb on - strand, within MPMX19_06743
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 5,187 - -2.2 5,187 - +0.7 5,187 - +0.2 5,187 - +0.9 5,235 + -0.3 5,235 + -0.0 5,236 - -0.6 5,236 - +2.1 5,236 - -1.3 5,774 + -0.7 5,774 + +0.9 5,774 + +0.9 5,774 + -0.0 5,775 - -0.5 5,775 - -0.7 5,775 - -0.6 5,775 - -2.0 5,944 + -1.7 5,944 + -0.8 5,945 - -0.1 5,949 + +0.1 5,950 - -1.4 5,950 - -0.4 5,956 + -0.4 5,956 + -0.1 5,956 + -0.6 5,956 + -1.5 5,956 + -0.5 5,956 + -1.1 5,956 + +0.4 5,956 + -1.1 5,957 - +0.1 5,957 - +1.1 5,958 + -0.7 5,958 + -0.8 5,958 + -0.1 5,958 + +0.3 5,958 + -0.9 5,958 + -0.1 5,958 + -1.8 5,958 + -0.3 5,958 + -1.2 5,958 + -3.3 5,958 + -0.2 5,958 + +0.9 5,958 + -1.2 5,958 + -1.1 5,958 + +1.7 5,958 + -1.9 5,958 + +0.1 5,958 + -1.1 5,958 + -1.4 5,959 - -0.1 5,959 - -1.6 5,959 - -0.1 5,959 - -0.2 5,959 - -0.7 5,959 - -2.1 5,959 - +1.7 5,959 - -0.5 5,959 - -0.1 5,959 - -1.4 5,959 - -0.5 5,959 - -1.2 5,959 - -0.9 5,959 - +0.2 5,959 - +0.9 5,959 - +0.9 5,959 - -0.7 5,959 - -2.5 5,959 - +2.1 6,266 - MPMX19_06741 0.41 -0.9 6,432 + +1.3 6,433 - -1.7 6,433 - +0.1 6,449 + -0.3 6,449 + -0.6 6,449 + -1.2 6,449 + +0.1 6,450 - -0.5 6,450 - -0.7 6,450 - -1.7 6,450 - +0.9 6,450 - -1.3 6,450 - -1.1 6,450 - +0.1 6,450 - +1.1 6,450 - -1.9 6,450 - -0.9 6,452 + +0.7 6,452 + -2.0 6,452 + -0.7 6,452 + -1.2 6,609 + MPMX19_06742 0.47 -2.4 6,609 + MPMX19_06742 0.47 +0.9 7,086 - MPMX19_06743 0.14 +0.9 7,086 - MPMX19_06743 0.14 -1.1 7,086 - MPMX19_06743 0.14 -1.0 7,086 - MPMX19_06743 0.14 -0.6
Or see this region's nucleotide sequence