Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06673 and MPMX19_06674 are separated by 602 nucleotides MPMX19_06674 and MPMX19_06675 are separated by 320 nucleotides
MPMX19_06673: MPMX19_06673 - hypothetical protein, at 237,150 to 237,242
_06673
MPMX19_06674: MPMX19_06674 - hypothetical protein, at 237,845 to 238,279
_06674
MPMX19_06675: MPMX19_06675 - hypothetical protein, at 238,600 to 239,892
_06675
Position (kb) 237
238
239 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 236.851 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.852 kb on - strand at 236.852 kb on - strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.090 kb on + strand at 237.091 kb on - strand at 237.094 kb on + strand at 237.094 kb on + strand at 237.095 kb on - strand at 237.112 kb on - strand at 237.339 kb on + strand at 237.339 kb on + strand at 237.339 kb on + strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.372 kb on + strand at 237.384 kb on + strand at 237.385 kb on - strand at 237.385 kb on - strand at 237.385 kb on - strand at 237.432 kb on + strand at 237.432 kb on + strand at 237.507 kb on + strand at 237.507 kb on + strand at 237.507 kb on + strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.686 kb on + strand at 237.687 kb on - strand at 237.782 kb on + strand at 237.782 kb on + strand at 237.782 kb on + strand at 238.277 kb on + strand at 238.277 kb on + strand at 238.277 kb on + strand at 238.277 kb on + strand at 238.278 kb on - strand at 238.278 kb on - strand at 238.278 kb on - strand at 238.278 kb on - strand at 238.355 kb on + strand at 238.355 kb on + strand at 238.355 kb on + strand at 238.363 kb on + strand at 238.363 kb on + strand at 238.364 kb on - strand at 238.364 kb on - strand at 238.364 kb on - strand at 238.364 kb on - strand at 238.364 kb on - strand at 238.520 kb on + strand at 238.521 kb on - strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.643 kb on + strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.644 kb on - strand at 238.645 kb on - strand at 238.786 kb on + strand, within MPMX19_06675 at 238.786 kb on + strand, within MPMX19_06675 at 238.786 kb on + strand, within MPMX19_06675 at 238.786 kb on + strand, within MPMX19_06675 at 238.786 kb on + strand, within MPMX19_06675 at 238.786 kb on + strand, within MPMX19_06675 at 238.786 kb on + strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.787 kb on - strand, within MPMX19_06675 at 238.990 kb on + strand, within MPMX19_06675 at 238.990 kb on + strand, within MPMX19_06675 at 238.990 kb on + strand, within MPMX19_06675 at 239.011 kb on + strand, within MPMX19_06675 at 239.011 kb on + strand, within MPMX19_06675 at 239.012 kb on - strand, within MPMX19_06675 at 239.012 kb on - strand, within MPMX19_06675 at 239.038 kb on + strand, within MPMX19_06675 at 239.038 kb on + strand, within MPMX19_06675 at 239.038 kb on + strand, within MPMX19_06675 at 239.038 kb on + strand, within MPMX19_06675 at 239.038 kb on + strand, within MPMX19_06675 at 239.039 kb on - strand, within MPMX19_06675 at 239.039 kb on - strand, within MPMX19_06675 at 239.039 kb on - strand, within MPMX19_06675 at 239.039 kb on - strand, within MPMX19_06675 at 239.039 kb on - strand, within MPMX19_06675 at 239.149 kb on + strand, within MPMX19_06675 at 239.150 kb on - strand, within MPMX19_06675 at 239.266 kb on + strand, within MPMX19_06675 at 239.275 kb on + strand, within MPMX19_06675 at 239.275 kb on + strand, within MPMX19_06675 at 239.276 kb on - strand, within MPMX19_06675 at 239.276 kb on - strand, within MPMX19_06675
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 236,851 + -1.1 236,851 + -0.5 236,851 + -1.3 236,851 + -3.0 236,852 - -0.1 236,852 - -1.0 237,045 + -0.5 237,045 + +0.0 237,045 + -0.1 237,045 + +0.8 237,045 + +0.9 237,045 + -0.1 237,045 + +0.5 237,045 + +0.5 237,045 + -0.6 237,045 + -0.2 237,045 + -0.6 237,045 + +0.4 237,045 + +0.3 237,045 + +0.7 237,045 + -0.7 237,045 + +0.7 237,045 + +1.4 237,045 + +1.3 237,045 + +0.4 237,045 + -1.4 237,046 - -0.3 237,046 - +0.1 237,046 - -1.4 237,046 - +0.0 237,046 - +1.1 237,046 - -0.0 237,046 - +0.6 237,046 - +1.7 237,046 - +0.6 237,046 - -0.7 237,046 - -1.2 237,046 - -0.1 237,046 - +1.1 237,046 - -1.7 237,046 - +0.7 237,046 - -0.2 237,046 - -0.1 237,046 - -1.2 237,046 - +0.3 237,046 - -0.3 237,090 + -0.1 237,091 - -0.7 237,094 + -0.5 237,094 + -1.6 237,095 - +0.1 237,112 - -0.9 237,339 + -0.3 237,339 + -0.1 237,339 + -0.0 237,340 - +0.4 237,340 - -0.6 237,340 - -1.2 237,340 - +0.8 237,340 - -0.4 237,340 - -1.0 237,340 - +0.9 237,340 - -1.0 237,372 + +0.3 237,384 + -0.6 237,385 - +0.3 237,385 - -2.2 237,385 - -1.4 237,432 + +0.6 237,432 + -0.2 237,507 + +0.1 237,507 + -1.0 237,507 + -0.6 237,508 - +1.0 237,508 - +1.1 237,508 - +0.0 237,508 - +0.3 237,508 - +0.9 237,517 + +1.5 237,517 + +1.7 237,517 + -0.3 237,517 + +0.9 237,517 + -1.4 237,517 + -0.5 237,517 + +0.3 237,517 + +1.1 237,517 + +0.4 237,517 + -0.5 237,518 - +0.4 237,518 - +1.4 237,518 - +0.7 237,518 - -0.0 237,518 - +0.1 237,518 - -1.1 237,686 + -1.0 237,687 - -0.2 237,782 + -0.8 237,782 + -2.0 237,782 + -0.3 238,277 + -1.7 238,277 + -0.7 238,277 + -1.7 238,277 + -0.6 238,278 - -1.6 238,278 - +0.7 238,278 - +0.3 238,278 - -1.0 238,355 + -0.5 238,355 + -0.3 238,355 + -0.4 238,363 + +1.7 238,363 + +0.1 238,364 - -0.1 238,364 - -1.3 238,364 - -0.5 238,364 - -0.1 238,364 - -1.2 238,520 + -0.6 238,521 - +0.1 238,643 + -2.8 238,643 + -0.7 238,643 + -1.1 238,643 + -1.9 238,643 + -0.3 238,643 + +0.1 238,643 + -0.7 238,643 + -1.5 238,643 + -2.5 238,643 + +0.3 238,643 + -0.6 238,643 + -0.6 238,643 + +0.1 238,643 + -1.0 238,643 + -0.1 238,643 + -1.4 238,643 + -0.6 238,643 + -1.5 238,643 + -0.5 238,643 + +0.4 238,643 + +1.1 238,643 + -3.6 238,643 + -0.9 238,643 + -2.8 238,643 + -0.9 238,643 + -1.7 238,644 - +0.4 238,644 - -0.3 238,644 - -0.6 238,644 - -0.8 238,644 - -0.8 238,644 - -2.5 238,644 - +0.5 238,644 - -1.0 238,644 - -1.4 238,644 - +0.4 238,644 - +1.4 238,644 - -1.5 238,644 - -2.7 238,644 - +0.6 238,644 - -0.7 238,644 - -0.5 238,644 - -1.5 238,644 - -1.1 238,644 - -1.4 238,644 - -0.3 238,644 - -1.4 238,644 - -0.9 238,644 - -2.1 238,644 - +0.1 238,645 - -2.7 238,786 + MPMX19_06675 0.14 -1.6 238,786 + MPMX19_06675 0.14 +0.2 238,786 + MPMX19_06675 0.14 -0.9 238,786 + MPMX19_06675 0.14 -0.7 238,786 + MPMX19_06675 0.14 -0.1 238,786 + MPMX19_06675 0.14 -0.9 238,786 + MPMX19_06675 0.14 -0.1 238,787 - MPMX19_06675 0.14 -0.9 238,787 - MPMX19_06675 0.14 -1.1 238,787 - MPMX19_06675 0.14 -0.9 238,787 - MPMX19_06675 0.14 -0.9 238,787 - MPMX19_06675 0.14 -0.7 238,787 - MPMX19_06675 0.14 -0.7 238,787 - MPMX19_06675 0.14 -1.5 238,787 - MPMX19_06675 0.14 -0.4 238,787 - MPMX19_06675 0.14 -1.7 238,787 - MPMX19_06675 0.14 -0.7 238,990 + MPMX19_06675 0.30 -0.7 238,990 + MPMX19_06675 0.30 +0.3 238,990 + MPMX19_06675 0.30 -0.3 239,011 + MPMX19_06675 0.32 -1.6 239,011 + MPMX19_06675 0.32 -2.0 239,012 - MPMX19_06675 0.32 +2.3 239,012 - MPMX19_06675 0.32 -1.3 239,038 + MPMX19_06675 0.34 -2.6 239,038 + MPMX19_06675 0.34 -1.5 239,038 + MPMX19_06675 0.34 -1.5 239,038 + MPMX19_06675 0.34 -0.9 239,038 + MPMX19_06675 0.34 +0.1 239,039 - MPMX19_06675 0.34 -0.7 239,039 - MPMX19_06675 0.34 -0.2 239,039 - MPMX19_06675 0.34 -1.2 239,039 - MPMX19_06675 0.34 -1.1 239,039 - MPMX19_06675 0.34 -1.1 239,149 + MPMX19_06675 0.42 -1.6 239,150 - MPMX19_06675 0.43 +0.0 239,266 + MPMX19_06675 0.52 -0.1 239,275 + MPMX19_06675 0.52 -0.6 239,275 + MPMX19_06675 0.52 -1.1 239,276 - MPMX19_06675 0.52 -1.0 239,276 - MPMX19_06675 0.52 +0.3
Or see this region's nucleotide sequence