Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06671 and MPMX19_06672 are separated by 364 nucleotides MPMX19_06672 and MPMX19_06673 are separated by 359 nucleotides
MPMX19_06671: MPMX19_06671 - hypothetical protein, at 233,790 to 235,748
_06671
MPMX19_06672: MPMX19_06672 - hypothetical protein, at 236,113 to 236,790
_06672
MPMX19_06673: MPMX19_06673 - hypothetical protein, at 237,150 to 237,242
_06673
Position (kb)
236
237 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 235.525 kb on + strand, within MPMX19_06671 at 235.525 kb on + strand, within MPMX19_06671 at 235.525 kb on + strand, within MPMX19_06671 at 235.525 kb on + strand, within MPMX19_06671 at 235.526 kb on - strand, within MPMX19_06671 at 235.526 kb on - strand, within MPMX19_06671 at 235.526 kb on - strand, within MPMX19_06671 at 235.526 kb on - strand, within MPMX19_06671 at 235.526 kb on - strand, within MPMX19_06671 at 235.526 kb on - strand, within MPMX19_06671 at 235.526 kb on - strand, within MPMX19_06671 at 235.526 kb on - strand, within MPMX19_06671 at 235.632 kb on + strand at 235.632 kb on + strand at 235.632 kb on + strand at 235.632 kb on + strand at 235.632 kb on + strand at 235.632 kb on + strand at 235.632 kb on + strand at 235.632 kb on + strand at 235.633 kb on - strand at 235.633 kb on - strand at 235.888 kb on + strand at 235.888 kb on + strand at 235.888 kb on + strand at 235.888 kb on + strand at 235.888 kb on + strand at 235.888 kb on + strand at 235.889 kb on - strand at 235.889 kb on - strand at 235.889 kb on - strand at 235.889 kb on - strand at 235.889 kb on - strand at 235.889 kb on - strand at 235.889 kb on - strand at 235.889 kb on - strand at 235.976 kb on + strand at 235.986 kb on + strand at 236.050 kb on + strand at 236.050 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.852 kb on - strand at 236.852 kb on - strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.090 kb on + strand at 237.091 kb on - strand at 237.094 kb on + strand at 237.094 kb on + strand at 237.095 kb on - strand at 237.112 kb on - strand at 237.339 kb on + strand at 237.339 kb on + strand at 237.339 kb on + strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.372 kb on + strand at 237.384 kb on + strand at 237.385 kb on - strand at 237.385 kb on - strand at 237.385 kb on - strand at 237.432 kb on + strand at 237.432 kb on + strand at 237.507 kb on + strand at 237.507 kb on + strand at 237.507 kb on + strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.686 kb on + strand at 237.687 kb on - strand at 237.782 kb on + strand at 237.782 kb on + strand at 237.782 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 235,525 + MPMX19_06671 0.89 +0.7 235,525 + MPMX19_06671 0.89 -0.3 235,525 + MPMX19_06671 0.89 -1.5 235,525 + MPMX19_06671 0.89 -2.5 235,526 - MPMX19_06671 0.89 -0.7 235,526 - MPMX19_06671 0.89 -1.6 235,526 - MPMX19_06671 0.89 -1.7 235,526 - MPMX19_06671 0.89 -0.7 235,526 - MPMX19_06671 0.89 -1.0 235,526 - MPMX19_06671 0.89 -2.6 235,526 - MPMX19_06671 0.89 -0.3 235,526 - MPMX19_06671 0.89 -0.2 235,632 + +0.5 235,632 + +0.5 235,632 + -0.4 235,632 + -1.3 235,632 + -2.2 235,632 + -0.3 235,632 + +0.4 235,632 + +0.2 235,633 - -1.6 235,633 - +1.1 235,888 + +1.4 235,888 + -0.9 235,888 + -0.3 235,888 + -1.1 235,888 + -0.5 235,888 + -1.3 235,889 - -0.5 235,889 - -0.8 235,889 - +1.3 235,889 - -0.9 235,889 - -0.1 235,889 - +0.5 235,889 - -2.3 235,889 - -1.6 235,976 + +0.8 235,986 + +0.9 236,050 + -1.1 236,050 + -0.1 236,851 + -1.1 236,851 + -0.5 236,851 + -1.3 236,851 + -3.0 236,852 - -0.1 236,852 - -1.0 237,045 + -0.5 237,045 + +0.0 237,045 + -0.1 237,045 + +0.8 237,045 + +0.9 237,045 + -0.1 237,045 + +0.5 237,045 + +0.5 237,045 + -0.6 237,045 + -0.2 237,045 + -0.6 237,045 + +0.4 237,045 + +0.3 237,045 + +0.7 237,045 + -0.7 237,045 + +0.7 237,045 + +1.4 237,045 + +1.3 237,045 + +0.4 237,045 + -1.4 237,046 - -0.3 237,046 - +0.1 237,046 - -1.4 237,046 - +0.0 237,046 - +1.1 237,046 - -0.0 237,046 - +0.6 237,046 - +1.7 237,046 - +0.6 237,046 - -0.7 237,046 - -1.2 237,046 - -0.1 237,046 - +1.1 237,046 - -1.7 237,046 - +0.7 237,046 - -0.2 237,046 - -0.1 237,046 - -1.2 237,046 - +0.3 237,046 - -0.3 237,090 + -0.1 237,091 - -0.7 237,094 + -0.5 237,094 + -1.6 237,095 - +0.1 237,112 - -0.9 237,339 + -0.3 237,339 + -0.1 237,339 + -0.0 237,340 - +0.4 237,340 - -0.6 237,340 - -1.2 237,340 - +0.8 237,340 - -0.4 237,340 - -1.0 237,340 - +0.9 237,340 - -1.0 237,372 + +0.3 237,384 + -0.6 237,385 - +0.3 237,385 - -2.2 237,385 - -1.4 237,432 + +0.6 237,432 + -0.2 237,507 + +0.1 237,507 + -1.0 237,507 + -0.6 237,508 - +1.0 237,508 - +1.1 237,508 - +0.0 237,508 - +0.3 237,508 - +0.9 237,517 + +1.5 237,517 + +1.7 237,517 + -0.3 237,517 + +0.9 237,517 + -1.4 237,517 + -0.5 237,517 + +0.3 237,517 + +1.1 237,517 + +0.4 237,517 + -0.5 237,518 - +0.4 237,518 - +1.4 237,518 - +0.7 237,518 - -0.0 237,518 - +0.1 237,518 - -1.1 237,686 + -1.0 237,687 - -0.2 237,782 + -0.8 237,782 + -2.0 237,782 + -0.3
Or see this region's nucleotide sequence