Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06672

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06671 and MPMX19_06672 are separated by 364 nucleotidesMPMX19_06672 and MPMX19_06673 are separated by 359 nucleotides MPMX19_06671: MPMX19_06671 - hypothetical protein, at 233,790 to 235,748 _06671 MPMX19_06672: MPMX19_06672 - hypothetical protein, at 236,113 to 236,790 _06672 MPMX19_06673: MPMX19_06673 - hypothetical protein, at 237,150 to 237,242 _06673 Position (kb) 236 237Strain fitness (log2 ratio) -3 -2 -1 0 1at 235.525 kb on + strand, within MPMX19_06671at 235.525 kb on + strand, within MPMX19_06671at 235.525 kb on + strand, within MPMX19_06671at 235.525 kb on + strand, within MPMX19_06671at 235.526 kb on - strand, within MPMX19_06671at 235.526 kb on - strand, within MPMX19_06671at 235.526 kb on - strand, within MPMX19_06671at 235.526 kb on - strand, within MPMX19_06671at 235.526 kb on - strand, within MPMX19_06671at 235.526 kb on - strand, within MPMX19_06671at 235.526 kb on - strand, within MPMX19_06671at 235.526 kb on - strand, within MPMX19_06671at 235.632 kb on + strandat 235.632 kb on + strandat 235.632 kb on + strandat 235.632 kb on + strandat 235.632 kb on + strandat 235.632 kb on + strandat 235.632 kb on + strandat 235.632 kb on + strandat 235.633 kb on - strandat 235.633 kb on - strandat 235.888 kb on + strandat 235.888 kb on + strandat 235.888 kb on + strandat 235.888 kb on + strandat 235.888 kb on + strandat 235.888 kb on + strandat 235.889 kb on - strandat 235.889 kb on - strandat 235.889 kb on - strandat 235.889 kb on - strandat 235.889 kb on - strandat 235.889 kb on - strandat 235.889 kb on - strandat 235.889 kb on - strandat 235.976 kb on + strandat 235.986 kb on + strandat 236.050 kb on + strandat 236.050 kb on + strandat 236.851 kb on + strandat 236.851 kb on + strandat 236.851 kb on + strandat 236.851 kb on + strandat 236.852 kb on - strandat 236.852 kb on - strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.045 kb on + strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.046 kb on - strandat 237.090 kb on + strandat 237.091 kb on - strandat 237.094 kb on + strandat 237.094 kb on + strandat 237.095 kb on - strandat 237.112 kb on - strandat 237.339 kb on + strandat 237.339 kb on + strandat 237.339 kb on + strandat 237.340 kb on - strandat 237.340 kb on - strandat 237.340 kb on - strandat 237.340 kb on - strandat 237.340 kb on - strandat 237.340 kb on - strandat 237.340 kb on - strandat 237.340 kb on - strandat 237.372 kb on + strandat 237.384 kb on + strandat 237.385 kb on - strandat 237.385 kb on - strandat 237.385 kb on - strandat 237.432 kb on + strandat 237.432 kb on + strandat 237.507 kb on + strandat 237.507 kb on + strandat 237.507 kb on + strandat 237.508 kb on - strandat 237.508 kb on - strandat 237.508 kb on - strandat 237.508 kb on - strandat 237.508 kb on - strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.517 kb on + strandat 237.518 kb on - strandat 237.518 kb on - strandat 237.518 kb on - strandat 237.518 kb on - strandat 237.518 kb on - strandat 237.518 kb on - strandat 237.686 kb on + strandat 237.687 kb on - strandat 237.782 kb on + strandat 237.782 kb on + strandat 237.782 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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235,525 + MPMX19_06671 0.89 +0.7
235,525 + MPMX19_06671 0.89 -0.3
235,525 + MPMX19_06671 0.89 -1.5
235,525 + MPMX19_06671 0.89 -2.5
235,526 - MPMX19_06671 0.89 -0.7
235,526 - MPMX19_06671 0.89 -1.6
235,526 - MPMX19_06671 0.89 -1.7
235,526 - MPMX19_06671 0.89 -0.7
235,526 - MPMX19_06671 0.89 -1.0
235,526 - MPMX19_06671 0.89 -2.6
235,526 - MPMX19_06671 0.89 -0.3
235,526 - MPMX19_06671 0.89 -0.2
235,632 + +0.5
235,632 + +0.5
235,632 + -0.4
235,632 + -1.3
235,632 + -2.2
235,632 + -0.3
235,632 + +0.4
235,632 + +0.2
235,633 - -1.6
235,633 - +1.1
235,888 + +1.4
235,888 + -0.9
235,888 + -0.3
235,888 + -1.1
235,888 + -0.5
235,888 + -1.3
235,889 - -0.5
235,889 - -0.8
235,889 - +1.3
235,889 - -0.9
235,889 - -0.1
235,889 - +0.5
235,889 - -2.3
235,889 - -1.6
235,976 + +0.8
235,986 + +0.9
236,050 + -1.1
236,050 + -0.1
236,851 + -1.1
236,851 + -0.5
236,851 + -1.3
236,851 + -3.0
236,852 - -0.1
236,852 - -1.0
237,045 + -0.5
237,045 + +0.0
237,045 + -0.1
237,045 + +0.8
237,045 + +0.9
237,045 + -0.1
237,045 + +0.5
237,045 + +0.5
237,045 + -0.6
237,045 + -0.2
237,045 + -0.6
237,045 + +0.4
237,045 + +0.3
237,045 + +0.7
237,045 + -0.7
237,045 + +0.7
237,045 + +1.4
237,045 + +1.3
237,045 + +0.4
237,045 + -1.4
237,046 - -0.3
237,046 - +0.1
237,046 - -1.4
237,046 - +0.0
237,046 - +1.1
237,046 - -0.0
237,046 - +0.6
237,046 - +1.7
237,046 - +0.6
237,046 - -0.7
237,046 - -1.2
237,046 - -0.1
237,046 - +1.1
237,046 - -1.7
237,046 - +0.7
237,046 - -0.2
237,046 - -0.1
237,046 - -1.2
237,046 - +0.3
237,046 - -0.3
237,090 + -0.1
237,091 - -0.7
237,094 + -0.5
237,094 + -1.6
237,095 - +0.1
237,112 - -0.9
237,339 + -0.3
237,339 + -0.1
237,339 + -0.0
237,340 - +0.4
237,340 - -0.6
237,340 - -1.2
237,340 - +0.8
237,340 - -0.4
237,340 - -1.0
237,340 - +0.9
237,340 - -1.0
237,372 + +0.3
237,384 + -0.6
237,385 - +0.3
237,385 - -2.2
237,385 - -1.4
237,432 + +0.6
237,432 + -0.2
237,507 + +0.1
237,507 + -1.0
237,507 + -0.6
237,508 - +1.0
237,508 - +1.1
237,508 - +0.0
237,508 - +0.3
237,508 - +0.9
237,517 + +1.5
237,517 + +1.7
237,517 + -0.3
237,517 + +0.9
237,517 + -1.4
237,517 + -0.5
237,517 + +0.3
237,517 + +1.1
237,517 + +0.4
237,517 + -0.5
237,518 - +0.4
237,518 - +1.4
237,518 - +0.7
237,518 - -0.0
237,518 - +0.1
237,518 - -1.1
237,686 + -1.0
237,687 - -0.2
237,782 + -0.8
237,782 + -2.0
237,782 + -0.3

Or see this region's nucleotide sequence