Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06244 and MPMX19_06245 are separated by 98 nucleotides MPMX19_06245 and MPMX19_06246 overlap by 11 nucleotides
MPMX19_06244: MPMX19_06244 - 3-succinoylsemialdehyde-pyridine dehydrogenase, at 435,282 to 436,715
_06244
MPMX19_06245: MPMX19_06245 - Nucleoid occlusion protein, at 436,814 to 437,731
_06245
MPMX19_06246: MPMX19_06246 - Nitrogenase iron protein, at 437,721 to 438,731
_06246
Position (kb) 436
437
438 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 436.275 kb on + strand, within MPMX19_06244 at 436.275 kb on + strand, within MPMX19_06244 at 436.275 kb on + strand, within MPMX19_06244 at 436.275 kb on + strand, within MPMX19_06244 at 436.275 kb on + strand, within MPMX19_06244 at 436.276 kb on - strand, within MPMX19_06244 at 436.276 kb on - strand, within MPMX19_06244 at 436.455 kb on + strand, within MPMX19_06244 at 436.500 kb on + strand, within MPMX19_06244 at 436.500 kb on + strand, within MPMX19_06244 at 436.500 kb on + strand, within MPMX19_06244 at 436.501 kb on - strand, within MPMX19_06244 at 436.515 kb on + strand, within MPMX19_06244 at 436.515 kb on + strand, within MPMX19_06244 at 436.515 kb on + strand, within MPMX19_06244 at 436.515 kb on + strand, within MPMX19_06244 at 436.515 kb on + strand, within MPMX19_06244 at 436.515 kb on + strand, within MPMX19_06244 at 436.515 kb on + strand, within MPMX19_06244 at 436.515 kb on + strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.516 kb on - strand, within MPMX19_06244 at 436.653 kb on + strand at 436.654 kb on - strand at 436.713 kb on + strand at 436.713 kb on + strand at 436.815 kb on + strand at 436.815 kb on + strand at 436.815 kb on + strand at 436.815 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 436,275 + MPMX19_06244 0.69 -0.7 436,275 + MPMX19_06244 0.69 -2.1 436,275 + MPMX19_06244 0.69 -1.5 436,275 + MPMX19_06244 0.69 +0.8 436,275 + MPMX19_06244 0.69 -0.8 436,276 - MPMX19_06244 0.69 -1.6 436,276 - MPMX19_06244 0.69 -1.5 436,455 + MPMX19_06244 0.82 +0.8 436,500 + MPMX19_06244 0.85 -0.2 436,500 + MPMX19_06244 0.85 +0.9 436,500 + MPMX19_06244 0.85 -1.7 436,501 - MPMX19_06244 0.85 -0.7 436,515 + MPMX19_06244 0.86 -0.6 436,515 + MPMX19_06244 0.86 +0.2 436,515 + MPMX19_06244 0.86 -1.0 436,515 + MPMX19_06244 0.86 -0.7 436,515 + MPMX19_06244 0.86 -1.6 436,515 + MPMX19_06244 0.86 -1.3 436,515 + MPMX19_06244 0.86 -0.5 436,515 + MPMX19_06244 0.86 -1.3 436,516 - MPMX19_06244 0.86 +1.8 436,516 - MPMX19_06244 0.86 -0.6 436,516 - MPMX19_06244 0.86 +0.0 436,516 - MPMX19_06244 0.86 -0.8 436,516 - MPMX19_06244 0.86 -1.1 436,516 - MPMX19_06244 0.86 -0.5 436,516 - MPMX19_06244 0.86 -0.7 436,516 - MPMX19_06244 0.86 -1.5 436,516 - MPMX19_06244 0.86 -2.1 436,516 - MPMX19_06244 0.86 -1.1 436,653 + +1.2 436,654 - +3.3 436,713 + -1.0 436,713 + -2.4 436,815 + +0.2 436,815 + -1.2 436,815 + +0.0 436,815 + -0.1
Or see this region's nucleotide sequence