Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06227 and MPMX19_06228 are separated by 42 nucleotides MPMX19_06228 and MPMX19_06229 are separated by 93 nucleotides
MPMX19_06227: MPMX19_06227 - L-arabinose 1-dehydrogenase (NAD(P)(+)), at 413,134 to 414,072
_06227
MPMX19_06228: MPMX19_06228 - hypothetical protein, at 414,115 to 415,695
_06228
MPMX19_06229: MPMX19_06229 - L-arabonate dehydratase, at 415,789 to 417,627
_06229
Position (kb) 414
415
416 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.127 kb on + strand at 413.128 kb on - strand at 413.128 kb on - strand at 413.128 kb on - strand at 413.128 kb on - strand at 413.128 kb on - strand at 413.128 kb on - strand at 413.128 kb on - strand at 413.128 kb on - strand at 413.190 kb on + strand at 413.190 kb on + strand at 413.190 kb on + strand at 413.190 kb on + strand at 413.191 kb on - strand at 413.191 kb on - strand at 413.909 kb on + strand, within MPMX19_06227 at 413.938 kb on + strand, within MPMX19_06227 at 413.938 kb on + strand, within MPMX19_06227 at 413.938 kb on + strand, within MPMX19_06227 at 413.939 kb on - strand, within MPMX19_06227 at 413.939 kb on - strand, within MPMX19_06227 at 413.939 kb on - strand, within MPMX19_06227 at 413.939 kb on - strand, within MPMX19_06227 at 413.939 kb on - strand, within MPMX19_06227 at 413.939 kb on - strand, within MPMX19_06227 at 413.939 kb on - strand, within MPMX19_06227 at 413.939 kb on - strand, within MPMX19_06227 at 413.950 kb on + strand, within MPMX19_06227 at 413.950 kb on + strand, within MPMX19_06227 at 413.950 kb on + strand, within MPMX19_06227 at 413.950 kb on + strand, within MPMX19_06227 at 413.950 kb on + strand, within MPMX19_06227 at 413.950 kb on + strand, within MPMX19_06227 at 413.951 kb on - strand, within MPMX19_06227 at 413.951 kb on - strand, within MPMX19_06227 at 414.070 kb on + strand at 414.070 kb on + strand at 414.070 kb on + strand at 414.070 kb on + strand at 414.071 kb on - strand at 414.071 kb on - strand at 414.071 kb on - strand at 414.071 kb on - strand at 414.098 kb on + strand at 414.098 kb on + strand at 414.099 kb on - strand at 414.488 kb on - strand, within MPMX19_06228 at 414.488 kb on - strand, within MPMX19_06228 at 415.754 kb on + strand at 415.754 kb on + strand at 415.754 kb on + strand at 415.755 kb on - strand at 415.755 kb on - strand at 415.755 kb on - strand at 415.755 kb on - strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.788 kb on + strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.789 kb on - strand at 415.909 kb on + strand at 415.909 kb on + strand at 415.909 kb on + strand at 415.909 kb on + strand at 415.909 kb on + strand at 415.909 kb on + strand at 415.909 kb on + strand at 415.909 kb on + strand at 415.910 kb on - strand at 415.910 kb on - strand at 415.910 kb on - strand at 415.910 kb on - strand at 415.910 kb on - strand at 415.910 kb on - strand at 415.910 kb on - strand at 415.910 kb on - strand at 415.910 kb on - strand at 415.921 kb on + strand at 415.921 kb on + strand at 416.149 kb on + strand, within MPMX19_06229 at 416.150 kb on - strand, within MPMX19_06229 at 416.150 kb on - strand, within MPMX19_06229 at 416.380 kb on + strand, within MPMX19_06229 at 416.380 kb on + strand, within MPMX19_06229 at 416.381 kb on - strand, within MPMX19_06229 at 416.381 kb on - strand, within MPMX19_06229 at 416.428 kb on + strand, within MPMX19_06229 at 416.428 kb on + strand, within MPMX19_06229 at 416.429 kb on - strand, within MPMX19_06229 at 416.429 kb on - strand, within MPMX19_06229 at 416.429 kb on - strand, within MPMX19_06229 at 416.545 kb on + strand, within MPMX19_06229 at 416.545 kb on + strand, within MPMX19_06229 at 416.545 kb on + strand, within MPMX19_06229 at 416.545 kb on + strand, within MPMX19_06229 at 416.545 kb on + strand, within MPMX19_06229 at 416.545 kb on + strand, within MPMX19_06229 at 416.545 kb on + strand, within MPMX19_06229 at 416.546 kb on - strand, within MPMX19_06229 at 416.546 kb on - strand, within MPMX19_06229 at 416.546 kb on - strand, within MPMX19_06229 at 416.546 kb on - strand, within MPMX19_06229
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 413,127 + -0.2 413,127 + -0.4 413,127 + -1.4 413,127 + +0.8 413,127 + +0.6 413,127 + -0.8 413,127 + -0.7 413,127 + -0.8 413,127 + -2.7 413,127 + -1.2 413,127 + -2.0 413,128 - +0.8 413,128 - -0.2 413,128 - -0.5 413,128 - -2.7 413,128 - -1.1 413,128 - -1.0 413,128 - +1.0 413,128 - +0.2 413,190 + +0.6 413,190 + -1.7 413,190 + +0.2 413,190 + -2.6 413,191 - -0.4 413,191 - -1.3 413,909 + MPMX19_06227 0.83 -1.1 413,938 + MPMX19_06227 0.86 +0.5 413,938 + MPMX19_06227 0.86 +0.0 413,938 + MPMX19_06227 0.86 +0.0 413,939 - MPMX19_06227 0.86 -0.7 413,939 - MPMX19_06227 0.86 -1.7 413,939 - MPMX19_06227 0.86 +0.5 413,939 - MPMX19_06227 0.86 +0.8 413,939 - MPMX19_06227 0.86 -1.1 413,939 - MPMX19_06227 0.86 -0.5 413,939 - MPMX19_06227 0.86 -0.4 413,939 - MPMX19_06227 0.86 -1.1 413,950 + MPMX19_06227 0.87 -0.5 413,950 + MPMX19_06227 0.87 -2.0 413,950 + MPMX19_06227 0.87 -0.8 413,950 + MPMX19_06227 0.87 -0.8 413,950 + MPMX19_06227 0.87 +0.2 413,950 + MPMX19_06227 0.87 -1.5 413,951 - MPMX19_06227 0.87 -1.7 413,951 - MPMX19_06227 0.87 -1.1 414,070 + -1.3 414,070 + -0.5 414,070 + -0.2 414,070 + -3.7 414,071 - +0.3 414,071 - +0.3 414,071 - -0.6 414,071 - -0.4 414,098 + -1.0 414,098 + -1.3 414,099 - +0.3 414,488 - MPMX19_06228 0.24 -1.0 414,488 - MPMX19_06228 0.24 +0.3 415,754 + -2.2 415,754 + -2.2 415,754 + +0.1 415,755 - +0.3 415,755 - -0.5 415,755 - +0.8 415,755 - +0.1 415,788 + +0.2 415,788 + -1.0 415,788 + +1.3 415,788 + +0.1 415,788 + -0.2 415,788 + -1.4 415,788 + +0.2 415,788 + +1.9 415,788 + -0.7 415,788 + -0.5 415,788 + -2.0 415,788 + -1.4 415,789 - -0.7 415,789 - +0.0 415,789 - -1.0 415,789 - +0.8 415,789 - -1.7 415,789 - -1.2 415,789 - -0.6 415,789 - -1.0 415,789 - -0.4 415,789 - +0.5 415,789 - +0.3 415,909 + +0.5 415,909 + -2.1 415,909 + +0.5 415,909 + -0.2 415,909 + -0.8 415,909 + +0.3 415,909 + -0.8 415,909 + +0.8 415,910 - +0.6 415,910 - -1.7 415,910 - -2.1 415,910 - -0.8 415,910 - +0.3 415,910 - +0.3 415,910 - +0.1 415,910 - -0.5 415,910 - -1.7 415,921 + -1.2 415,921 + -1.1 416,149 + MPMX19_06229 0.20 -1.0 416,150 - MPMX19_06229 0.20 -0.5 416,150 - MPMX19_06229 0.20 -1.8 416,380 + MPMX19_06229 0.32 -0.7 416,380 + MPMX19_06229 0.32 -0.2 416,381 - MPMX19_06229 0.32 +0.8 416,381 - MPMX19_06229 0.32 +0.0 416,428 + MPMX19_06229 0.35 -0.2 416,428 + MPMX19_06229 0.35 +0.3 416,429 - MPMX19_06229 0.35 -0.5 416,429 - MPMX19_06229 0.35 +0.9 416,429 - MPMX19_06229 0.35 +0.1 416,545 + MPMX19_06229 0.41 -0.8 416,545 + MPMX19_06229 0.41 +0.0 416,545 + MPMX19_06229 0.41 -0.8 416,545 + MPMX19_06229 0.41 -0.1 416,545 + MPMX19_06229 0.41 -0.1 416,545 + MPMX19_06229 0.41 -0.6 416,545 + MPMX19_06229 0.41 +0.1 416,546 - MPMX19_06229 0.41 -1.1 416,546 - MPMX19_06229 0.41 +0.3 416,546 - MPMX19_06229 0.41 -0.2 416,546 - MPMX19_06229 0.41 -1.7
Or see this region's nucleotide sequence