Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06003 and MPMX19_06004 overlap by 4 nucleotides MPMX19_06004 and MPMX19_06005 are separated by 3 nucleotides MPMX19_06005 and MPMX19_06006 are separated by 1 nucleotides MPMX19_06006 and MPMX19_06007 are separated by 201 nucleotides
MPMX19_06003: MPMX19_06003 - hypothetical protein, at 157,471 to 158,961
_06003
MPMX19_06004: MPMX19_06004 - Lipopolysaccharide export system ATP-binding protein LptB, at 158,958 to 159,866
_06004
MPMX19_06005: MPMX19_06005 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 159,870 to 160,580
_06005
MPMX19_06006: MPMX19_06006 - hypothetical protein, at 160,582 to 160,935
_06006
MPMX19_06007: MPMX19_06007 - Leu/Ile/Val-binding protein, at 161,137 to 162,237
_06007
Position (kb) 159
160
161 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 159.150 kb on + strand, within MPMX19_06004 at 159.150 kb on + strand, within MPMX19_06004 at 159.150 kb on + strand, within MPMX19_06004 at 159.150 kb on + strand, within MPMX19_06004 at 159.150 kb on + strand, within MPMX19_06004 at 159.150 kb on + strand, within MPMX19_06004 at 159.481 kb on - strand, within MPMX19_06004 at 160.560 kb on + strand at 160.560 kb on + strand at 160.560 kb on + strand at 160.712 kb on - strand, within MPMX19_06006 at 160.712 kb on - strand, within MPMX19_06006 at 160.712 kb on - strand, within MPMX19_06006 at 160.712 kb on - strand, within MPMX19_06006 at 160.712 kb on - strand, within MPMX19_06006 at 160.870 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.882 kb on + strand, within MPMX19_06006 at 160.883 kb on - strand, within MPMX19_06006 at 160.883 kb on - strand, within MPMX19_06006 at 160.883 kb on - strand, within MPMX19_06006 at 160.883 kb on - strand, within MPMX19_06006 at 160.961 kb on + strand at 160.961 kb on + strand at 160.967 kb on + strand at 160.967 kb on + strand at 160.968 kb on - strand at 160.968 kb on - strand at 160.982 kb on + strand at 160.982 kb on + strand at 161.031 kb on + strand at 161.031 kb on + strand at 161.032 kb on - strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.036 kb on + strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.037 kb on - strand at 161.090 kb on + strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.091 kb on - strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.114 kb on + strand at 161.115 kb on - strand at 161.115 kb on - strand at 161.115 kb on - strand at 161.115 kb on - strand at 161.115 kb on - strand at 161.245 kb on + strand at 161.245 kb on + strand at 161.246 kb on - strand at 161.246 kb on - strand at 161.246 kb on - strand at 161.246 kb on - strand at 161.467 kb on + strand, within MPMX19_06007 at 161.467 kb on + strand, within MPMX19_06007 at 161.467 kb on + strand, within MPMX19_06007 at 161.467 kb on + strand, within MPMX19_06007 at 161.467 kb on + strand, within MPMX19_06007 at 161.467 kb on + strand, within MPMX19_06007 at 161.467 kb on + strand, within MPMX19_06007 at 161.467 kb on + strand, within MPMX19_06007 at 161.467 kb on + strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007 at 161.468 kb on - strand, within MPMX19_06007
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 159,150 + MPMX19_06004 0.21 -0.6 159,150 + MPMX19_06004 0.21 -0.6 159,150 + MPMX19_06004 0.21 -2.0 159,150 + MPMX19_06004 0.21 -0.6 159,150 + MPMX19_06004 0.21 -0.1 159,150 + MPMX19_06004 0.21 +0.2 159,481 - MPMX19_06004 0.58 -1.3 160,560 + -1.2 160,560 + -1.3 160,560 + -0.2 160,712 - MPMX19_06006 0.37 -1.1 160,712 - MPMX19_06006 0.37 +0.5 160,712 - MPMX19_06006 0.37 +0.4 160,712 - MPMX19_06006 0.37 +1.6 160,712 - MPMX19_06006 0.37 -0.8 160,870 + MPMX19_06006 0.81 -1.2 160,882 + MPMX19_06006 0.85 -0.8 160,882 + MPMX19_06006 0.85 -0.7 160,882 + MPMX19_06006 0.85 +0.8 160,882 + MPMX19_06006 0.85 -2.6 160,882 + MPMX19_06006 0.85 -0.2 160,882 + MPMX19_06006 0.85 +0.4 160,882 + MPMX19_06006 0.85 +0.0 160,882 + MPMX19_06006 0.85 -0.3 160,882 + MPMX19_06006 0.85 -0.6 160,883 - MPMX19_06006 0.85 +0.4 160,883 - MPMX19_06006 0.85 -1.8 160,883 - MPMX19_06006 0.85 -1.1 160,883 - MPMX19_06006 0.85 -0.2 160,961 + -0.8 160,961 + -0.1 160,967 + -0.2 160,967 + -0.2 160,968 - +0.0 160,968 - -1.2 160,982 + +0.0 160,982 + +0.4 161,031 + +0.5 161,031 + -1.1 161,032 - +0.0 161,036 + -2.1 161,036 + -0.4 161,036 + -2.1 161,036 + -0.6 161,036 + +1.1 161,036 + -1.0 161,036 + -0.7 161,036 + -1.2 161,036 + -0.5 161,036 + -1.6 161,036 + -0.6 161,036 + +0.4 161,036 + +0.8 161,036 + -1.0 161,037 - -1.6 161,037 - -0.2 161,037 - +0.2 161,037 - -2.3 161,037 - -0.2 161,037 - -0.5 161,037 - -1.8 161,037 - +0.9 161,037 - -1.4 161,037 - -0.6 161,090 + -1.9 161,091 - +0.4 161,091 - +1.4 161,091 - +1.4 161,091 - -0.2 161,091 - +0.5 161,091 - -1.1 161,091 - +0.5 161,091 - +1.4 161,091 - -0.3 161,091 - -0.6 161,114 + -0.4 161,114 + -0.9 161,114 + -0.6 161,114 + -0.5 161,114 + -1.1 161,114 + -1.2 161,114 + -0.1 161,114 + -1.7 161,114 + -2.8 161,114 + +0.9 161,114 + +0.1 161,114 + +0.1 161,114 + -0.2 161,115 - -0.8 161,115 - -0.5 161,115 - +0.2 161,115 - -0.6 161,115 - +1.1 161,245 + -1.7 161,245 + -1.7 161,246 - -0.5 161,246 - -0.8 161,246 - -0.5 161,246 - -0.7 161,467 + MPMX19_06007 0.30 +0.4 161,467 + MPMX19_06007 0.30 +1.0 161,467 + MPMX19_06007 0.30 -1.2 161,467 + MPMX19_06007 0.30 +0.5 161,467 + MPMX19_06007 0.30 +0.4 161,467 + MPMX19_06007 0.30 -0.2 161,467 + MPMX19_06007 0.30 -2.3 161,467 + MPMX19_06007 0.30 -0.5 161,467 + MPMX19_06007 0.30 -0.5 161,468 - MPMX19_06007 0.30 -1.6 161,468 - MPMX19_06007 0.30 -0.1 161,468 - MPMX19_06007 0.30 -0.5 161,468 - MPMX19_06007 0.30 -0.5 161,468 - MPMX19_06007 0.30 +1.4 161,468 - MPMX19_06007 0.30 -0.1 161,468 - MPMX19_06007 0.30 -0.5 161,468 - MPMX19_06007 0.30 +0.8 161,468 - MPMX19_06007 0.30 -0.5 161,468 - MPMX19_06007 0.30 -2.8
Or see this region's nucleotide sequence