Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05936 and MPMX19_05937 are separated by 146 nucleotides MPMX19_05937 and MPMX19_05938 are separated by 276 nucleotides
MPMX19_05936: MPMX19_05936 - Alpha-galactosidase, at 78,582 to 79,880
_05936
MPMX19_05937: MPMX19_05937 - hypothetical protein, at 80,027 to 80,833
_05937
MPMX19_05938: MPMX19_05938 - Beta-glucosidase A, at 81,110 to 82,474
_05938
Position (kb) 80
81 Strain fitness (log2 ratio) -2
-1
0
1 at 79.087 kb on + strand, within MPMX19_05936 at 79.088 kb on - strand, within MPMX19_05936 at 79.088 kb on - strand, within MPMX19_05936 at 79.088 kb on - strand, within MPMX19_05936 at 79.088 kb on - strand, within MPMX19_05936 at 79.213 kb on + strand, within MPMX19_05936 at 79.213 kb on + strand, within MPMX19_05936 at 79.213 kb on + strand, within MPMX19_05936 at 79.213 kb on + strand, within MPMX19_05936 at 79.214 kb on - strand, within MPMX19_05936 at 79.214 kb on - strand, within MPMX19_05936 at 79.214 kb on - strand, within MPMX19_05936 at 79.214 kb on - strand, within MPMX19_05936 at 79.745 kb on + strand, within MPMX19_05936 at 79.934 kb on + strand at 79.935 kb on - strand at 79.935 kb on - strand at 79.935 kb on - strand at 79.979 kb on + strand at 79.979 kb on + strand at 79.979 kb on + strand at 79.979 kb on + strand at 79.979 kb on + strand at 79.979 kb on + strand at 79.979 kb on + strand at 79.980 kb on - strand at 79.980 kb on - strand at 79.980 kb on - strand at 79.980 kb on - strand at 80.028 kb on + strand at 80.028 kb on + strand at 80.028 kb on + strand at 80.028 kb on + strand at 80.029 kb on - strand at 80.029 kb on - strand at 80.040 kb on + strand at 80.040 kb on + strand at 80.040 kb on + strand at 80.041 kb on - strand at 80.041 kb on - strand at 80.041 kb on - strand at 80.120 kb on + strand, within MPMX19_05937 at 80.120 kb on + strand, within MPMX19_05937 at 80.120 kb on + strand, within MPMX19_05937 at 80.120 kb on + strand, within MPMX19_05937 at 80.120 kb on + strand, within MPMX19_05937 at 80.120 kb on + strand, within MPMX19_05937 at 80.120 kb on + strand, within MPMX19_05937 at 80.120 kb on + strand, within MPMX19_05937 at 80.120 kb on + strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.121 kb on - strand, within MPMX19_05937 at 80.216 kb on + strand, within MPMX19_05937 at 80.216 kb on + strand, within MPMX19_05937 at 80.217 kb on - strand, within MPMX19_05937 at 80.259 kb on + strand, within MPMX19_05937 at 80.259 kb on + strand, within MPMX19_05937 at 80.260 kb on - strand, within MPMX19_05937 at 80.301 kb on + strand, within MPMX19_05937 at 80.302 kb on - strand, within MPMX19_05937 at 80.302 kb on - strand, within MPMX19_05937 at 80.773 kb on + strand at 80.907 kb on + strand at 80.907 kb on + strand at 80.908 kb on - strand at 81.105 kb on + strand at 81.105 kb on + strand at 81.106 kb on - strand at 81.106 kb on - strand at 81.106 kb on - strand at 81.203 kb on + strand at 81.317 kb on + strand, within MPMX19_05938 at 81.317 kb on + strand, within MPMX19_05938 at 81.317 kb on + strand, within MPMX19_05938 at 81.318 kb on - strand, within MPMX19_05938 at 81.371 kb on + strand, within MPMX19_05938 at 81.371 kb on + strand, within MPMX19_05938 at 81.371 kb on + strand, within MPMX19_05938 at 81.371 kb on + strand, within MPMX19_05938 at 81.371 kb on + strand, within MPMX19_05938 at 81.372 kb on - strand, within MPMX19_05938 at 81.446 kb on + strand, within MPMX19_05938 at 81.446 kb on + strand, within MPMX19_05938 at 81.447 kb on - strand, within MPMX19_05938 at 81.503 kb on + strand, within MPMX19_05938 at 81.503 kb on + strand, within MPMX19_05938 at 81.503 kb on + strand, within MPMX19_05938 at 81.503 kb on + strand, within MPMX19_05938 at 81.503 kb on + strand, within MPMX19_05938 at 81.503 kb on + strand, within MPMX19_05938 at 81.503 kb on + strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.504 kb on - strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.581 kb on + strand, within MPMX19_05938 at 81.582 kb on - strand, within MPMX19_05938 at 81.582 kb on - strand, within MPMX19_05938 at 81.582 kb on - strand, within MPMX19_05938 at 81.582 kb on - strand, within MPMX19_05938 at 81.582 kb on - strand, within MPMX19_05938 at 81.582 kb on - strand, within MPMX19_05938 at 81.582 kb on - strand, within MPMX19_05938 at 81.582 kb on - strand, within MPMX19_05938 at 81.668 kb on + strand, within MPMX19_05938
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 79,087 + MPMX19_05936 0.39 +1.6 79,088 - MPMX19_05936 0.39 -1.0 79,088 - MPMX19_05936 0.39 -0.8 79,088 - MPMX19_05936 0.39 -1.6 79,088 - MPMX19_05936 0.39 +0.0 79,213 + MPMX19_05936 0.49 -1.8 79,213 + MPMX19_05936 0.49 +0.8 79,213 + MPMX19_05936 0.49 +0.0 79,213 + MPMX19_05936 0.49 -0.6 79,214 - MPMX19_05936 0.49 +0.8 79,214 - MPMX19_05936 0.49 -0.4 79,214 - MPMX19_05936 0.49 -1.3 79,214 - MPMX19_05936 0.49 +0.0 79,745 + MPMX19_05936 0.90 -0.5 79,934 + -0.8 79,935 - -0.3 79,935 - -1.5 79,935 - -1.1 79,979 + +0.5 79,979 + -0.0 79,979 + -1.6 79,979 + -2.1 79,979 + -0.8 79,979 + -1.1 79,979 + -0.2 79,980 - -1.0 79,980 - +0.5 79,980 - -0.7 79,980 - -1.6 80,028 + +0.0 80,028 + -1.2 80,028 + -0.9 80,028 + -0.7 80,029 - -0.5 80,029 - -0.5 80,040 + -0.1 80,040 + -0.2 80,040 + +0.3 80,041 - -0.9 80,041 - -1.1 80,041 - +0.4 80,120 + MPMX19_05937 0.12 +0.0 80,120 + MPMX19_05937 0.12 +0.0 80,120 + MPMX19_05937 0.12 +0.0 80,120 + MPMX19_05937 0.12 -0.5 80,120 + MPMX19_05937 0.12 +0.0 80,120 + MPMX19_05937 0.12 -0.1 80,120 + MPMX19_05937 0.12 -0.6 80,120 + MPMX19_05937 0.12 -0.4 80,120 + MPMX19_05937 0.12 -2.0 80,121 - MPMX19_05937 0.12 -1.1 80,121 - MPMX19_05937 0.12 -0.1 80,121 - MPMX19_05937 0.12 -0.2 80,121 - MPMX19_05937 0.12 -0.5 80,121 - MPMX19_05937 0.12 +0.4 80,121 - MPMX19_05937 0.12 -0.7 80,121 - MPMX19_05937 0.12 -0.2 80,121 - MPMX19_05937 0.12 -0.5 80,121 - MPMX19_05937 0.12 -0.8 80,121 - MPMX19_05937 0.12 +0.7 80,121 - MPMX19_05937 0.12 -0.3 80,121 - MPMX19_05937 0.12 -0.2 80,121 - MPMX19_05937 0.12 -0.2 80,121 - MPMX19_05937 0.12 -0.1 80,216 + MPMX19_05937 0.23 +0.2 80,216 + MPMX19_05937 0.23 +0.0 80,217 - MPMX19_05937 0.24 -0.5 80,259 + MPMX19_05937 0.29 +0.0 80,259 + MPMX19_05937 0.29 -0.2 80,260 - MPMX19_05937 0.29 +1.7 80,301 + MPMX19_05937 0.34 +0.9 80,302 - MPMX19_05937 0.34 +0.4 80,302 - MPMX19_05937 0.34 -0.8 80,773 + -0.5 80,907 + -2.2 80,907 + +1.4 80,908 - -1.1 81,105 + -0.8 81,105 + -0.6 81,106 - -2.6 81,106 - -0.8 81,106 - -0.7 81,203 + -0.5 81,317 + MPMX19_05938 0.15 -1.2 81,317 + MPMX19_05938 0.15 -1.0 81,317 + MPMX19_05938 0.15 -0.5 81,318 - MPMX19_05938 0.15 -1.1 81,371 + MPMX19_05938 0.19 -0.8 81,371 + MPMX19_05938 0.19 -0.2 81,371 + MPMX19_05938 0.19 +0.4 81,371 + MPMX19_05938 0.19 -1.0 81,371 + MPMX19_05938 0.19 -1.6 81,372 - MPMX19_05938 0.19 +1.2 81,446 + MPMX19_05938 0.25 -0.2 81,446 + MPMX19_05938 0.25 -0.5 81,447 - MPMX19_05938 0.25 -1.2 81,503 + MPMX19_05938 0.29 -1.2 81,503 + MPMX19_05938 0.29 -1.1 81,503 + MPMX19_05938 0.29 +0.8 81,503 + MPMX19_05938 0.29 -0.2 81,503 + MPMX19_05938 0.29 -0.5 81,503 + MPMX19_05938 0.29 +0.1 81,503 + MPMX19_05938 0.29 -0.6 81,504 - MPMX19_05938 0.29 -0.1 81,504 - MPMX19_05938 0.29 -0.5 81,504 - MPMX19_05938 0.29 +0.4 81,504 - MPMX19_05938 0.29 -1.5 81,504 - MPMX19_05938 0.29 -0.8 81,504 - MPMX19_05938 0.29 -1.3 81,504 - MPMX19_05938 0.29 +0.4 81,504 - MPMX19_05938 0.29 -0.8 81,504 - MPMX19_05938 0.29 -2.2 81,581 + MPMX19_05938 0.35 -0.7 81,581 + MPMX19_05938 0.35 -0.8 81,581 + MPMX19_05938 0.35 -1.3 81,581 + MPMX19_05938 0.35 +0.2 81,581 + MPMX19_05938 0.35 -2.1 81,581 + MPMX19_05938 0.35 -0.6 81,581 + MPMX19_05938 0.35 -1.5 81,581 + MPMX19_05938 0.35 -1.1 81,581 + MPMX19_05938 0.35 -1.3 81,582 - MPMX19_05938 0.35 -0.8 81,582 - MPMX19_05938 0.35 +0.0 81,582 - MPMX19_05938 0.35 -2.1 81,582 - MPMX19_05938 0.35 -0.6 81,582 - MPMX19_05938 0.35 -0.3 81,582 - MPMX19_05938 0.35 -1.0 81,582 - MPMX19_05938 0.35 -0.5 81,582 - MPMX19_05938 0.35 -2.1 81,668 + MPMX19_05938 0.41 -1.1
Or see this region's nucleotide sequence