Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05815 and MPMX19_05816 are separated by 60 nucleotides MPMX19_05816 and MPMX19_05817 are separated by 50 nucleotides MPMX19_05817 and MPMX19_05818 overlap by 4 nucleotides MPMX19_05818 and MPMX19_05819 overlap by 4 nucleotides
MPMX19_05815: MPMX19_05815 - hypothetical protein, at 543,114 to 543,884
_05815
MPMX19_05816: MPMX19_05816 - Thiol-disulfide oxidoreductase ResA, at 543,945 to 544,625
_05816
MPMX19_05817: MPMX19_05817 - Argininosuccinate lyase, at 544,676 to 546,124
_05817
MPMX19_05818: MPMX19_05818 - hypothetical protein, at 546,121 to 546,327
_05818
MPMX19_05819: MPMX19_05819 - Diaminopimelate decarboxylase, at 546,324 to 547,619
_05819
Position (kb) 544
545
546
547 Strain fitness (log2 ratio) -2
-1
0
1
2 at 543.911 kb on + strand at 543.911 kb on + strand at 543.911 kb on + strand at 543.911 kb on + strand at 543.911 kb on + strand at 543.911 kb on + strand at 543.912 kb on - strand at 543.912 kb on - strand at 543.924 kb on + strand at 543.924 kb on + strand at 543.924 kb on + strand at 543.925 kb on - strand at 543.925 kb on - strand at 543.925 kb on - strand at 543.925 kb on - strand at 543.925 kb on - strand at 543.925 kb on - strand at 543.925 kb on - strand at 543.925 kb on - strand at 544.196 kb on + strand, within MPMX19_05816 at 544.196 kb on + strand, within MPMX19_05816 at 544.196 kb on + strand, within MPMX19_05816 at 544.196 kb on + strand, within MPMX19_05816 at 544.197 kb on - strand, within MPMX19_05816 at 544.197 kb on - strand, within MPMX19_05816 at 544.197 kb on - strand, within MPMX19_05816 at 544.197 kb on - strand, within MPMX19_05816 at 544.197 kb on - strand, within MPMX19_05816 at 544.197 kb on - strand, within MPMX19_05816 at 544.197 kb on - strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.198 kb on + strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.199 kb on - strand, within MPMX19_05816 at 544.625 kb on + strand at 544.625 kb on + strand at 544.625 kb on + strand at 546.262 kb on + strand, within MPMX19_05818 at 546.262 kb on + strand, within MPMX19_05818 at 546.262 kb on + strand, within MPMX19_05818
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 543,911 + +1.0 543,911 + -0.9 543,911 + -0.5 543,911 + -0.6 543,911 + +0.4 543,911 + -0.8 543,912 - +0.0 543,912 - -0.2 543,924 + -0.2 543,924 + -0.4 543,924 + -0.6 543,925 - -0.5 543,925 - -1.2 543,925 - +1.8 543,925 - +0.1 543,925 - +0.2 543,925 - +0.5 543,925 - -0.9 543,925 - +0.0 544,196 + MPMX19_05816 0.37 -0.6 544,196 + MPMX19_05816 0.37 -0.6 544,196 + MPMX19_05816 0.37 -1.7 544,196 + MPMX19_05816 0.37 +1.2 544,197 - MPMX19_05816 0.37 -0.5 544,197 - MPMX19_05816 0.37 -1.0 544,197 - MPMX19_05816 0.37 -0.5 544,197 - MPMX19_05816 0.37 +0.8 544,197 - MPMX19_05816 0.37 -0.7 544,197 - MPMX19_05816 0.37 -1.4 544,197 - MPMX19_05816 0.37 +0.4 544,198 + MPMX19_05816 0.37 -0.2 544,198 + MPMX19_05816 0.37 +0.0 544,198 + MPMX19_05816 0.37 -0.8 544,198 + MPMX19_05816 0.37 -1.3 544,198 + MPMX19_05816 0.37 -1.5 544,198 + MPMX19_05816 0.37 -0.7 544,198 + MPMX19_05816 0.37 -0.2 544,198 + MPMX19_05816 0.37 -0.9 544,198 + MPMX19_05816 0.37 -1.1 544,198 + MPMX19_05816 0.37 -0.8 544,199 - MPMX19_05816 0.37 -0.5 544,199 - MPMX19_05816 0.37 -2.1 544,199 - MPMX19_05816 0.37 +0.2 544,199 - MPMX19_05816 0.37 -0.4 544,199 - MPMX19_05816 0.37 +0.1 544,199 - MPMX19_05816 0.37 -0.9 544,199 - MPMX19_05816 0.37 +1.6 544,199 - MPMX19_05816 0.37 -0.9 544,199 - MPMX19_05816 0.37 -1.8 544,199 - MPMX19_05816 0.37 -0.9 544,625 + -1.7 544,625 + +0.6 544,625 + -1.2 546,262 + MPMX19_05818 0.68 -2.1 546,262 + MPMX19_05818 0.68 -0.6 546,262 + MPMX19_05818 0.68 -0.6
Or see this region's nucleotide sequence