Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05567

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_05565 and MPMX19_05566 overlap by 4 nucleotidesMPMX19_05566 and MPMX19_05567 overlap by 13 nucleotidesMPMX19_05567 and MPMX19_05568 are separated by 31 nucleotidesMPMX19_05568 and MPMX19_05569 are separated by 119 nucleotides MPMX19_05565: MPMX19_05565 - Precorrin-4 C(11)-methyltransferase, at 273,533 to 274,294 _05565 MPMX19_05566: MPMX19_05566 - hypothetical protein, at 274,291 to 274,734 _05566 MPMX19_05567: MPMX19_05567 - Precorrin-6Y C(5,15)-methyltransferase [decarboxylating], at 274,722 to 275,984 _05567 MPMX19_05568: MPMX19_05568 - Precorrin-6A reductase, at 276,016 to 276,768 _05568 MPMX19_05569: MPMX19_05569 - Precorrin-3B C(17)-methyltransferase, at 276,888 to 277,661 _05569 Position (kb) 274 275 276Strain fitness (log2 ratio) -2 -1 0 1at 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.767 kb on - strandat 276.790 kb on - strandat 276.839 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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276,767 - +1.0
276,767 - -0.4
276,767 - -0.4
276,767 - +0.4
276,767 - +0.5
276,767 - +0.4
276,767 - +0.4
276,767 - -1.3
276,767 - -0.6
276,767 - +0.9
276,767 - -2.1
276,767 - +0.5
276,767 - +0.4
276,767 - -0.3
276,767 - -2.4
276,767 - -1.7
276,767 - -1.0
276,767 - -1.4
276,767 - -0.4
276,767 - +0.6
276,767 - -2.4
276,767 - -0.3
276,767 - -0.3
276,767 - -1.1
276,767 - -0.4
276,767 - -1.5
276,790 - -0.2
276,839 - -0.1

Or see this region's nucleotide sequence