Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05535 and MPMX19_05536 overlap by 14 nucleotides MPMX19_05536 and MPMX19_05537 are separated by 25 nucleotides MPMX19_05537 and MPMX19_05538 are separated by 157 nucleotides
MPMX19_05535: MPMX19_05535 - Ribonuclease G, at 240,795 to 242,030
_05535
MPMX19_05536: MPMX19_05536 - dTTP/UTP pyrophosphatase, at 242,017 to 242,649
_05536
MPMX19_05537: MPMX19_05537 - Translation initiation factor IF-1, at 242,675 to 242,893
_05537
MPMX19_05538: MPMX19_05538 - hypothetical protein, at 243,051 to 244,229
_05538
Position (kb) 242
243 Strain fitness (log2 ratio) -2
-1
0
1
2 at 242.120 kb on + strand, within MPMX19_05536 at 242.913 kb on - strand at 242.930 kb on - strand at 242.930 kb on - strand at 242.930 kb on - strand at 243.064 kb on + strand at 243.065 kb on - strand at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.337 kb on + strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.338 kb on - strand, within MPMX19_05538 at 243.412 kb on + strand, within MPMX19_05538 at 243.413 kb on - strand, within MPMX19_05538 at 243.544 kb on + strand, within MPMX19_05538 at 243.545 kb on - strand, within MPMX19_05538
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 242,120 + MPMX19_05536 0.16 -1.3 242,913 - -0.6 242,930 - -1.0 242,930 - -1.8 242,930 - -1.5 243,064 + +1.2 243,065 - -1.2 243,337 + MPMX19_05538 0.24 -0.2 243,337 + MPMX19_05538 0.24 -0.5 243,337 + MPMX19_05538 0.24 -1.4 243,337 + MPMX19_05538 0.24 -0.2 243,337 + MPMX19_05538 0.24 -0.1 243,337 + MPMX19_05538 0.24 -1.0 243,337 + MPMX19_05538 0.24 -0.8 243,337 + MPMX19_05538 0.24 -0.1 243,337 + MPMX19_05538 0.24 -1.3 243,337 + MPMX19_05538 0.24 -0.5 243,337 + MPMX19_05538 0.24 -1.5 243,337 + MPMX19_05538 0.24 -0.4 243,337 + MPMX19_05538 0.24 -1.3 243,337 + MPMX19_05538 0.24 -1.0 243,337 + MPMX19_05538 0.24 -0.9 243,337 + MPMX19_05538 0.24 +0.8 243,337 + MPMX19_05538 0.24 -1.1 243,337 + MPMX19_05538 0.24 -1.9 243,337 + MPMX19_05538 0.24 +0.8 243,337 + MPMX19_05538 0.24 +0.5 243,337 + MPMX19_05538 0.24 -1.6 243,337 + MPMX19_05538 0.24 -0.7 243,337 + MPMX19_05538 0.24 +0.8 243,338 - MPMX19_05538 0.24 +1.8 243,338 - MPMX19_05538 0.24 -1.4 243,338 - MPMX19_05538 0.24 -0.8 243,338 - MPMX19_05538 0.24 +0.0 243,338 - MPMX19_05538 0.24 -1.0 243,338 - MPMX19_05538 0.24 +0.6 243,338 - MPMX19_05538 0.24 -2.2 243,338 - MPMX19_05538 0.24 -1.2 243,338 - MPMX19_05538 0.24 -1.0 243,338 - MPMX19_05538 0.24 +0.0 243,338 - MPMX19_05538 0.24 -0.6 243,338 - MPMX19_05538 0.24 -1.0 243,338 - MPMX19_05538 0.24 -0.4 243,338 - MPMX19_05538 0.24 -0.6 243,338 - MPMX19_05538 0.24 -0.4 243,412 + MPMX19_05538 0.31 -0.6 243,413 - MPMX19_05538 0.31 +0.1 243,544 + MPMX19_05538 0.42 -1.3 243,545 - MPMX19_05538 0.42 -0.2
Or see this region's nucleotide sequence