Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05339 and MPMX19_05340 are separated by 203 nucleotides MPMX19_05340 and MPMX19_05341 are separated by 390 nucleotides
MPMX19_05339: MPMX19_05339 - UDP-glucose 6-dehydrogenase, at 11,180 to 12,511
_05339
MPMX19_05340: MPMX19_05340 - UTP--glucose-1-phosphate uridylyltransferase, at 12,715 to 13,584
_05340
MPMX19_05341: MPMX19_05341 - hypothetical protein, at 13,975 to 14,751
_05341
Position (kb) 12
13
14 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 12.550 kb on - strand at 12.550 kb on - strand at 12.550 kb on - strand at 12.550 kb on - strand at 12.550 kb on - strand at 12.550 kb on - strand at 12.550 kb on - strand at 12.550 kb on - strand at 12.550 kb on - strand at 12.723 kb on - strand at 12.723 kb on - strand at 12.723 kb on - strand at 12.723 kb on - strand at 12.727 kb on - strand at 12.727 kb on - strand at 12.727 kb on - strand at 12.727 kb on - strand at 12.727 kb on - strand at 12.727 kb on - strand at 12.727 kb on - strand at 12.727 kb on - strand at 13.738 kb on + strand at 13.739 kb on - strand at 13.744 kb on + strand at 13.744 kb on + strand at 13.744 kb on + strand at 13.745 kb on - strand at 13.745 kb on - strand at 13.836 kb on - strand at 13.895 kb on + strand at 13.895 kb on + strand at 13.895 kb on + strand at 13.895 kb on + strand at 13.895 kb on + strand at 13.895 kb on + strand at 13.895 kb on + strand at 13.895 kb on + strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.896 kb on - strand at 13.947 kb on + strand at 13.947 kb on + strand at 13.948 kb on - strand at 13.948 kb on - strand at 13.948 kb on - strand at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.167 kb on + strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.168 kb on - strand, within MPMX19_05341 at 14.259 kb on + strand, within MPMX19_05341 at 14.259 kb on + strand, within MPMX19_05341 at 14.260 kb on - strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.320 kb on + strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341 at 14.321 kb on - strand, within MPMX19_05341
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 12,550 - -2.3 12,550 - +0.2 12,550 - -1.5 12,550 - -0.1 12,550 - -2.0 12,550 - -0.7 12,550 - -0.1 12,550 - -1.5 12,550 - -2.2 12,723 - -1.6 12,723 - -1.3 12,723 - -1.1 12,723 - -0.2 12,727 - -1.0 12,727 - -0.4 12,727 - -1.4 12,727 - +1.4 12,727 - -0.4 12,727 - +0.2 12,727 - -1.2 12,727 - -1.0 13,738 + +0.8 13,739 - -0.6 13,744 + -1.0 13,744 + -1.1 13,744 + +0.2 13,745 - +0.4 13,745 - -1.0 13,836 - +0.8 13,895 + -0.3 13,895 + +0.5 13,895 + -1.1 13,895 + -0.4 13,895 + +0.8 13,895 + +1.4 13,895 + -0.3 13,895 + +0.8 13,896 - +0.0 13,896 - -0.7 13,896 - -0.5 13,896 - -0.4 13,896 - +1.0 13,896 - -0.9 13,896 - +2.8 13,896 - -0.6 13,947 + -0.9 13,947 + -0.8 13,948 - -1.2 13,948 - -1.7 13,948 - -1.1 14,167 + MPMX19_05341 0.25 -1.3 14,167 + MPMX19_05341 0.25 -0.2 14,167 + MPMX19_05341 0.25 +0.0 14,167 + MPMX19_05341 0.25 +0.7 14,167 + MPMX19_05341 0.25 +1.2 14,167 + MPMX19_05341 0.25 -0.3 14,167 + MPMX19_05341 0.25 -0.4 14,167 + MPMX19_05341 0.25 -0.0 14,167 + MPMX19_05341 0.25 -0.6 14,167 + MPMX19_05341 0.25 -1.6 14,168 - MPMX19_05341 0.25 -0.5 14,168 - MPMX19_05341 0.25 -2.0 14,168 - MPMX19_05341 0.25 -1.1 14,168 - MPMX19_05341 0.25 -1.5 14,168 - MPMX19_05341 0.25 +0.2 14,168 - MPMX19_05341 0.25 -0.7 14,168 - MPMX19_05341 0.25 +0.8 14,168 - MPMX19_05341 0.25 -0.8 14,168 - MPMX19_05341 0.25 +0.9 14,259 + MPMX19_05341 0.37 +3.4 14,259 + MPMX19_05341 0.37 -0.3 14,260 - MPMX19_05341 0.37 -1.8 14,320 + MPMX19_05341 0.44 +0.9 14,320 + MPMX19_05341 0.44 +0.2 14,320 + MPMX19_05341 0.44 -0.8 14,320 + MPMX19_05341 0.44 -1.8 14,320 + MPMX19_05341 0.44 -0.7 14,320 + MPMX19_05341 0.44 -0.2 14,320 + MPMX19_05341 0.44 +1.2 14,320 + MPMX19_05341 0.44 -0.3 14,320 + MPMX19_05341 0.44 -0.6 14,321 - MPMX19_05341 0.45 -0.9 14,321 - MPMX19_05341 0.45 -0.8 14,321 - MPMX19_05341 0.45 -0.6 14,321 - MPMX19_05341 0.45 +0.9 14,321 - MPMX19_05341 0.45 -0.7 14,321 - MPMX19_05341 0.45 -1.4 14,321 - MPMX19_05341 0.45 -1.5 14,321 - MPMX19_05341 0.45 -0.6 14,321 - MPMX19_05341 0.45 +0.5 14,321 - MPMX19_05341 0.45 +0.8
Or see this region's nucleotide sequence