Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05199 and MPMX19_05200 are separated by 124 nucleotides MPMX19_05200 and MPMX19_05201 are separated by 48 nucleotides
MPMX19_05199: MPMX19_05199 - Zinc transport protein ZntB, at 703,068 to 704,078
_05199
MPMX19_05200: MPMX19_05200 - Hydroxypyruvate reductase, at 704,203 to 705,213
_05200
MPMX19_05201: MPMX19_05201 - Hydroxycarboxylate dehydrogenase B, at 705,262 to 706,326
_05201
Position (kb) 704
705
706 Strain fitness (log2 ratio) -2
-1
0
1 at 703.362 kb on + strand, within MPMX19_05199 at 703.362 kb on + strand, within MPMX19_05199 at 703.362 kb on + strand, within MPMX19_05199 at 703.362 kb on + strand, within MPMX19_05199 at 703.362 kb on + strand, within MPMX19_05199 at 703.363 kb on - strand, within MPMX19_05199 at 703.363 kb on - strand, within MPMX19_05199 at 703.363 kb on - strand, within MPMX19_05199 at 703.363 kb on - strand, within MPMX19_05199 at 703.363 kb on - strand, within MPMX19_05199 at 703.363 kb on - strand, within MPMX19_05199 at 703.497 kb on + strand, within MPMX19_05199 at 703.497 kb on + strand, within MPMX19_05199 at 703.498 kb on - strand, within MPMX19_05199 at 703.620 kb on + strand, within MPMX19_05199 at 703.798 kb on - strand, within MPMX19_05199 at 703.798 kb on - strand, within MPMX19_05199 at 704.606 kb on - strand, within MPMX19_05200 at 704.606 kb on - strand, within MPMX19_05200 at 704.606 kb on - strand, within MPMX19_05200 at 705.617 kb on + strand, within MPMX19_05201 at 705.618 kb on - strand, within MPMX19_05201 at 705.911 kb on + strand, within MPMX19_05201 at 705.911 kb on + strand, within MPMX19_05201 at 705.911 kb on + strand, within MPMX19_05201 at 705.911 kb on + strand, within MPMX19_05201 at 705.911 kb on + strand, within MPMX19_05201 at 705.912 kb on - strand, within MPMX19_05201 at 705.912 kb on - strand, within MPMX19_05201 at 705.912 kb on - strand, within MPMX19_05201 at 705.951 kb on - strand, within MPMX19_05201 at 705.969 kb on + strand, within MPMX19_05201 at 706.164 kb on - strand, within MPMX19_05201 at 706.164 kb on - strand, within MPMX19_05201 at 706.164 kb on - strand, within MPMX19_05201
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 703,362 + MPMX19_05199 0.29 +1.1 703,362 + MPMX19_05199 0.29 -0.6 703,362 + MPMX19_05199 0.29 -0.2 703,362 + MPMX19_05199 0.29 +0.1 703,362 + MPMX19_05199 0.29 -1.7 703,363 - MPMX19_05199 0.29 +0.1 703,363 - MPMX19_05199 0.29 +0.1 703,363 - MPMX19_05199 0.29 -2.2 703,363 - MPMX19_05199 0.29 -2.1 703,363 - MPMX19_05199 0.29 -1.5 703,363 - MPMX19_05199 0.29 -1.1 703,497 + MPMX19_05199 0.42 +1.1 703,497 + MPMX19_05199 0.42 -1.1 703,498 - MPMX19_05199 0.43 -2.0 703,620 + MPMX19_05199 0.55 -1.2 703,798 - MPMX19_05199 0.72 -2.0 703,798 - MPMX19_05199 0.72 -0.7 704,606 - MPMX19_05200 0.40 +0.8 704,606 - MPMX19_05200 0.40 +0.1 704,606 - MPMX19_05200 0.40 -1.2 705,617 + MPMX19_05201 0.33 -0.4 705,618 - MPMX19_05201 0.33 -1.7 705,911 + MPMX19_05201 0.61 -0.4 705,911 + MPMX19_05201 0.61 -1.5 705,911 + MPMX19_05201 0.61 +0.7 705,911 + MPMX19_05201 0.61 -1.8 705,911 + MPMX19_05201 0.61 -0.9 705,912 - MPMX19_05201 0.61 -2.4 705,912 - MPMX19_05201 0.61 +0.4 705,912 - MPMX19_05201 0.61 -0.1 705,951 - MPMX19_05201 0.65 -0.3 705,969 + MPMX19_05201 0.66 -1.4 706,164 - MPMX19_05201 0.85 -0.3 706,164 - MPMX19_05201 0.85 +1.2 706,164 - MPMX19_05201 0.85 -2.7
Or see this region's nucleotide sequence