Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05054 and MPMX19_05055 are separated by 498 nucleotides MPMX19_05055 and MPMX19_05056 are separated by 154 nucleotides MPMX19_05056 and MPMX19_05057 are separated by 122 nucleotides
MPMX19_05054: MPMX19_05054 - UDP-N-acetylglucosamine 4-epimerase, at 539,444 to 540,388
_05054
MPMX19_05055: MPMX19_05055 - Phosphoserine aminotransferase, at 540,887 to 542,074
_05055
MPMX19_05056: MPMX19_05056 - hypothetical protein, at 542,229 to 542,696
_05056
MPMX19_05057: MPMX19_05057 - hypothetical protein, at 542,819 to 543,184
_05057
Position (kb) 540
541
542
543 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 539.946 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.006 kb on + strand, within MPMX19_05054 at 540.007 kb on - strand, within MPMX19_05054 at 540.007 kb on - strand, within MPMX19_05054 at 540.007 kb on - strand, within MPMX19_05054 at 540.007 kb on - strand, within MPMX19_05054 at 540.007 kb on - strand, within MPMX19_05054 at 540.007 kb on - strand, within MPMX19_05054 at 540.007 kb on - strand, within MPMX19_05054 at 540.007 kb on - strand, within MPMX19_05054 at 540.027 kb on + strand, within MPMX19_05054 at 540.027 kb on + strand, within MPMX19_05054 at 540.027 kb on + strand, within MPMX19_05054 at 540.027 kb on + strand, within MPMX19_05054 at 540.027 kb on + strand, within MPMX19_05054 at 540.027 kb on + strand, within MPMX19_05054 at 540.027 kb on + strand, within MPMX19_05054 at 540.027 kb on + strand, within MPMX19_05054 at 540.028 kb on - strand, within MPMX19_05054 at 540.028 kb on - strand, within MPMX19_05054 at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.378 kb on + strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.379 kb on - strand at 540.504 kb on + strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.138 kb on - strand at 542.181 kb on + strand at 542.181 kb on + strand at 542.230 kb on + strand at 542.231 kb on - strand at 542.231 kb on - strand at 542.231 kb on - strand at 542.260 kb on + strand at 542.260 kb on + strand at 542.261 kb on - strand at 542.261 kb on - strand at 542.261 kb on - strand at 542.366 kb on - strand, within MPMX19_05056 at 542.476 kb on + strand, within MPMX19_05056 at 542.476 kb on - strand, within MPMX19_05056 at 542.477 kb on - strand, within MPMX19_05056 at 542.511 kb on - strand, within MPMX19_05056 at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.684 kb on + strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.685 kb on - strand at 542.738 kb on - strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.756 kb on + strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.757 kb on - strand at 542.871 kb on + strand, within MPMX19_05057 at 542.872 kb on - strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.892 kb on + strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.893 kb on - strand, within MPMX19_05057 at 542.923 kb on - strand, within MPMX19_05057 at 542.923 kb on - strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.943 kb on + strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.944 kb on - strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.964 kb on + strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.965 kb on - strand, within MPMX19_05057 at 542.967 kb on + strand, within MPMX19_05057 at 542.968 kb on - strand, within MPMX19_05057 at 542.968 kb on - strand, within MPMX19_05057
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 539,946 + MPMX19_05054 0.53 -0.5 540,006 + MPMX19_05054 0.59 +0.9 540,006 + MPMX19_05054 0.59 -0.7 540,006 + MPMX19_05054 0.59 -0.0 540,006 + MPMX19_05054 0.59 +1.0 540,006 + MPMX19_05054 0.59 +0.5 540,006 + MPMX19_05054 0.59 -0.2 540,006 + MPMX19_05054 0.59 -0.1 540,006 + MPMX19_05054 0.59 -0.1 540,006 + MPMX19_05054 0.59 -2.8 540,006 + MPMX19_05054 0.59 -0.7 540,006 + MPMX19_05054 0.59 -0.3 540,007 - MPMX19_05054 0.60 +1.8 540,007 - MPMX19_05054 0.60 -0.3 540,007 - MPMX19_05054 0.60 +1.0 540,007 - MPMX19_05054 0.60 +0.2 540,007 - MPMX19_05054 0.60 -1.6 540,007 - MPMX19_05054 0.60 +0.1 540,007 - MPMX19_05054 0.60 -0.1 540,007 - MPMX19_05054 0.60 -0.8 540,027 + MPMX19_05054 0.62 -0.9 540,027 + MPMX19_05054 0.62 +1.1 540,027 + MPMX19_05054 0.62 -0.7 540,027 + MPMX19_05054 0.62 -3.2 540,027 + MPMX19_05054 0.62 +0.6 540,027 + MPMX19_05054 0.62 +0.1 540,027 + MPMX19_05054 0.62 -0.4 540,027 + MPMX19_05054 0.62 -0.1 540,028 - MPMX19_05054 0.62 -1.0 540,028 - MPMX19_05054 0.62 -0.3 540,378 + -1.7 540,378 + +1.0 540,378 + -0.6 540,378 + -1.0 540,378 + +0.5 540,378 + -0.7 540,378 + -0.7 540,378 + +0.9 540,378 + -0.5 540,378 + -0.3 540,378 + +0.9 540,378 + -0.8 540,378 + +1.2 540,378 + +0.5 540,378 + -1.3 540,378 + -0.5 540,378 + -0.4 540,378 + -0.2 540,379 - -0.7 540,379 - -0.0 540,379 - +0.1 540,379 - -0.7 540,379 - +0.9 540,379 - -0.2 540,379 - -0.5 540,379 - +0.7 540,379 - +0.1 540,379 - +1.5 540,504 + -1.0 542,138 - -0.3 542,138 - -0.3 542,138 - -1.7 542,138 - -0.3 542,138 - +1.5 542,138 - -1.9 542,138 - +0.3 542,181 + -0.6 542,181 + +0.1 542,230 + -0.9 542,231 - -2.0 542,231 - +0.5 542,231 - -1.1 542,260 + +0.6 542,260 + -2.1 542,261 - -0.1 542,261 - -0.5 542,261 - +0.1 542,366 - MPMX19_05056 0.29 +0.1 542,476 + MPMX19_05056 0.53 -0.0 542,476 - MPMX19_05056 0.53 +0.1 542,477 - MPMX19_05056 0.53 -0.5 542,511 - MPMX19_05056 0.60 -1.2 542,684 + -0.9 542,684 + -0.1 542,684 + -0.7 542,684 + -0.7 542,684 + -1.1 542,684 + -1.6 542,684 + -0.9 542,684 + -1.6 542,684 + +0.3 542,685 - +0.3 542,685 - -0.5 542,685 - +0.0 542,685 - -1.4 542,685 - -0.1 542,685 - +0.1 542,685 - -0.6 542,685 - +1.0 542,685 - -1.0 542,685 - -0.4 542,685 - -1.2 542,685 - -1.3 542,685 - +1.2 542,685 - +1.0 542,738 - -1.1 542,756 + -0.6 542,756 + -1.3 542,756 + -1.6 542,756 + -0.9 542,756 + -1.1 542,756 + -1.1 542,756 + +0.1 542,757 - -1.6 542,757 - -0.1 542,757 - -1.3 542,757 - +0.5 542,757 - -0.1 542,871 + MPMX19_05057 0.14 +0.4 542,872 - MPMX19_05057 0.14 -1.2 542,892 + MPMX19_05057 0.20 -0.3 542,892 + MPMX19_05057 0.20 -1.8 542,892 + MPMX19_05057 0.20 -0.3 542,892 + MPMX19_05057 0.20 -1.5 542,892 + MPMX19_05057 0.20 -2.1 542,892 + MPMX19_05057 0.20 +0.5 542,892 + MPMX19_05057 0.20 -1.0 542,892 + MPMX19_05057 0.20 -0.7 542,892 + MPMX19_05057 0.20 -0.3 542,892 + MPMX19_05057 0.20 -0.7 542,892 + MPMX19_05057 0.20 -1.0 542,892 + MPMX19_05057 0.20 -1.7 542,892 + MPMX19_05057 0.20 -1.0 542,892 + MPMX19_05057 0.20 -1.7 542,892 + MPMX19_05057 0.20 -0.9 542,892 + MPMX19_05057 0.20 -0.3 542,892 + MPMX19_05057 0.20 -1.3 542,892 + MPMX19_05057 0.20 -0.3 542,893 - MPMX19_05057 0.20 +1.5 542,893 - MPMX19_05057 0.20 +0.5 542,893 - MPMX19_05057 0.20 -1.1 542,893 - MPMX19_05057 0.20 -0.3 542,893 - MPMX19_05057 0.20 -1.1 542,893 - MPMX19_05057 0.20 -1.0 542,893 - MPMX19_05057 0.20 -0.5 542,893 - MPMX19_05057 0.20 -1.1 542,893 - MPMX19_05057 0.20 -1.0 542,893 - MPMX19_05057 0.20 -1.4 542,893 - MPMX19_05057 0.20 -1.4 542,893 - MPMX19_05057 0.20 -0.7 542,893 - MPMX19_05057 0.20 +1.1 542,893 - MPMX19_05057 0.20 -1.7 542,893 - MPMX19_05057 0.20 +0.3 542,893 - MPMX19_05057 0.20 -0.1 542,923 - MPMX19_05057 0.28 -0.5 542,923 - MPMX19_05057 0.28 -1.4 542,943 + MPMX19_05057 0.34 -0.8 542,943 + MPMX19_05057 0.34 +0.9 542,943 + MPMX19_05057 0.34 +0.5 542,943 + MPMX19_05057 0.34 -0.3 542,943 + MPMX19_05057 0.34 -1.0 542,943 + MPMX19_05057 0.34 -0.3 542,943 + MPMX19_05057 0.34 -0.1 542,943 + MPMX19_05057 0.34 -1.0 542,943 + MPMX19_05057 0.34 -1.0 542,943 + MPMX19_05057 0.34 +0.5 542,943 + MPMX19_05057 0.34 -0.6 542,944 - MPMX19_05057 0.34 -1.2 542,944 - MPMX19_05057 0.34 -0.7 542,944 - MPMX19_05057 0.34 -1.8 542,944 - MPMX19_05057 0.34 -1.1 542,944 - MPMX19_05057 0.34 +0.2 542,944 - MPMX19_05057 0.34 +0.1 542,964 + MPMX19_05057 0.40 -1.5 542,964 + MPMX19_05057 0.40 -1.5 542,964 + MPMX19_05057 0.40 -0.6 542,965 - MPMX19_05057 0.40 +0.6 542,965 - MPMX19_05057 0.40 +1.5 542,965 - MPMX19_05057 0.40 -0.9 542,965 - MPMX19_05057 0.40 -1.1 542,965 - MPMX19_05057 0.40 -0.5 542,965 - MPMX19_05057 0.40 -2.0 542,967 + MPMX19_05057 0.40 -1.0 542,968 - MPMX19_05057 0.41 +0.3 542,968 - MPMX19_05057 0.41 +0.3
Or see this region's nucleotide sequence