Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04816 and MPMX19_04817 are separated by 227 nucleotides MPMX19_04817 and MPMX19_04818 are separated by 261 nucleotides
MPMX19_04816: MPMX19_04816 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 220,920 to 221,624
_04816
MPMX19_04817: MPMX19_04817 - HTH-type transcriptional repressor NsrR, at 221,852 to 222,304
_04817
MPMX19_04818: MPMX19_04818 - Hydroxyacylglutathione hydrolase GloC, at 222,566 to 223,198
_04818
Position (kb) 221
222
223 Strain fitness (log2 ratio) -2
-1
0
1
2 at 220.972 kb on + strand at 220.972 kb on + strand at 220.972 kb on + strand at 220.972 kb on + strand at 220.973 kb on - strand at 220.973 kb on - strand at 220.973 kb on - strand at 220.973 kb on - strand at 220.973 kb on - strand at 221.047 kb on - strand, within MPMX19_04816 at 221.131 kb on + strand, within MPMX19_04816 at 221.131 kb on + strand, within MPMX19_04816 at 221.131 kb on + strand, within MPMX19_04816 at 221.131 kb on + strand, within MPMX19_04816 at 221.131 kb on + strand, within MPMX19_04816 at 221.132 kb on - strand, within MPMX19_04816 at 221.132 kb on - strand, within MPMX19_04816 at 221.132 kb on - strand, within MPMX19_04816 at 221.132 kb on - strand, within MPMX19_04816 at 221.132 kb on - strand, within MPMX19_04816 at 221.132 kb on - strand, within MPMX19_04816 at 221.156 kb on - strand, within MPMX19_04816 at 221.156 kb on - strand, within MPMX19_04816 at 221.156 kb on - strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.308 kb on + strand, within MPMX19_04816 at 221.309 kb on - strand, within MPMX19_04816 at 221.309 kb on - strand, within MPMX19_04816 at 221.309 kb on - strand, within MPMX19_04816 at 221.659 kb on + strand at 221.659 kb on + strand at 221.659 kb on + strand at 221.659 kb on + strand at 221.660 kb on - strand at 221.660 kb on - strand at 221.660 kb on - strand at 221.660 kb on - strand at 221.660 kb on - strand at 221.660 kb on - strand at 221.660 kb on - strand at 221.733 kb on - strand at 221.816 kb on + strand at 221.838 kb on + strand at 221.847 kb on + strand at 221.847 kb on + strand at 221.847 kb on + strand at 221.847 kb on + strand at 221.847 kb on + strand at 221.850 kb on + strand at 221.850 kb on + strand at 221.850 kb on + strand at 222.200 kb on - strand, within MPMX19_04817 at 222.282 kb on + strand at 222.282 kb on + strand at 222.282 kb on + strand at 222.282 kb on + strand at 222.283 kb on - strand at 222.283 kb on - strand at 222.283 kb on - strand at 222.320 kb on - strand at 222.320 kb on - strand at 222.322 kb on + strand at 222.323 kb on - strand at 222.323 kb on - strand at 222.356 kb on + strand at 222.357 kb on - strand at 222.357 kb on - strand at 222.357 kb on - strand at 222.357 kb on - strand at 222.372 kb on - strand at 222.381 kb on + strand at 222.382 kb on - strand at 222.436 kb on + strand at 222.436 kb on + strand at 222.436 kb on + strand at 222.436 kb on + strand at 222.436 kb on + strand at 222.436 kb on + strand at 222.436 kb on + strand at 222.437 kb on - strand at 222.437 kb on - strand at 222.437 kb on - strand at 222.437 kb on - strand at 222.437 kb on - strand at 222.437 kb on - strand at 222.437 kb on - strand at 222.523 kb on + strand at 222.523 kb on + strand at 222.524 kb on - strand at 222.524 kb on - strand at 222.524 kb on - strand at 222.524 kb on - strand at 222.524 kb on - strand at 222.537 kb on + strand at 222.537 kb on + strand at 222.537 kb on + strand at 222.537 kb on + strand at 222.537 kb on + strand at 222.537 kb on + strand at 222.537 kb on + strand at 222.537 kb on + strand at 222.538 kb on - strand at 222.538 kb on - strand at 222.538 kb on - strand at 222.538 kb on - strand at 222.538 kb on - strand at 222.538 kb on - strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.572 kb on + strand at 222.573 kb on - strand at 222.573 kb on - strand at 222.573 kb on - strand at 222.573 kb on - strand at 222.573 kb on - strand at 222.573 kb on - strand at 222.573 kb on - strand at 222.573 kb on - strand at 223.067 kb on + strand, within MPMX19_04818 at 223.067 kb on + strand, within MPMX19_04818 at 223.067 kb on + strand, within MPMX19_04818 at 223.067 kb on + strand, within MPMX19_04818 at 223.067 kb on + strand, within MPMX19_04818 at 223.067 kb on + strand, within MPMX19_04818 at 223.068 kb on - strand, within MPMX19_04818 at 223.068 kb on - strand, within MPMX19_04818 at 223.068 kb on - strand, within MPMX19_04818 at 223.068 kb on - strand, within MPMX19_04818 at 223.068 kb on - strand, within MPMX19_04818 at 223.068 kb on - strand, within MPMX19_04818 at 223.068 kb on - strand, within MPMX19_04818 at 223.068 kb on - strand, within MPMX19_04818 at 223.175 kb on + strand at 223.175 kb on + strand at 223.175 kb on + strand at 223.175 kb on + strand at 223.175 kb on + strand at 223.175 kb on + strand at 223.176 kb on - strand at 223.176 kb on - strand at 223.176 kb on - strand at 223.176 kb on - strand at 223.197 kb on - strand at 223.249 kb on + strand at 223.249 kb on + strand at 223.249 kb on + strand at 223.249 kb on + strand at 223.249 kb on + strand at 223.249 kb on + strand at 223.249 kb on + strand at 223.249 kb on + strand at 223.250 kb on - strand at 223.250 kb on - strand at 223.250 kb on - strand at 223.250 kb on - strand at 223.250 kb on - strand at 223.252 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 220,972 + +0.1 220,972 + +1.0 220,972 + -1.0 220,972 + +0.3 220,973 - -0.1 220,973 - +0.6 220,973 - -1.4 220,973 - +0.1 220,973 - -1.2 221,047 - MPMX19_04816 0.18 +0.5 221,131 + MPMX19_04816 0.30 -1.1 221,131 + MPMX19_04816 0.30 -0.9 221,131 + MPMX19_04816 0.30 -0.3 221,131 + MPMX19_04816 0.30 -0.5 221,131 + MPMX19_04816 0.30 -0.1 221,132 - MPMX19_04816 0.30 +0.1 221,132 - MPMX19_04816 0.30 -0.9 221,132 - MPMX19_04816 0.30 -1.7 221,132 - MPMX19_04816 0.30 -0.7 221,132 - MPMX19_04816 0.30 -2.0 221,132 - MPMX19_04816 0.30 -1.6 221,156 - MPMX19_04816 0.33 -2.2 221,156 - MPMX19_04816 0.33 -1.0 221,156 - MPMX19_04816 0.33 -2.5 221,308 + MPMX19_04816 0.55 -0.9 221,308 + MPMX19_04816 0.55 +0.1 221,308 + MPMX19_04816 0.55 -0.7 221,308 + MPMX19_04816 0.55 +1.0 221,308 + MPMX19_04816 0.55 +0.0 221,308 + MPMX19_04816 0.55 -0.9 221,308 + MPMX19_04816 0.55 -0.5 221,308 + MPMX19_04816 0.55 -1.9 221,308 + MPMX19_04816 0.55 -0.1 221,308 + MPMX19_04816 0.55 -0.1 221,308 + MPMX19_04816 0.55 -0.2 221,308 + MPMX19_04816 0.55 +0.1 221,308 + MPMX19_04816 0.55 +0.1 221,309 - MPMX19_04816 0.55 +0.2 221,309 - MPMX19_04816 0.55 -0.7 221,309 - MPMX19_04816 0.55 -1.2 221,659 + -1.4 221,659 + +0.2 221,659 + -0.5 221,659 + -0.4 221,660 - -1.0 221,660 - +0.1 221,660 - -1.1 221,660 - -1.8 221,660 - -0.5 221,660 - -0.2 221,660 - -1.0 221,733 - -0.1 221,816 + +0.7 221,838 + +0.7 221,847 + +0.5 221,847 + -0.2 221,847 + -0.3 221,847 + +0.1 221,847 + -0.7 221,850 + +0.3 221,850 + -1.1 221,850 + +0.9 222,200 - MPMX19_04817 0.77 -0.5 222,282 + +0.9 222,282 + +0.9 222,282 + -0.3 222,282 + +0.5 222,283 - +0.4 222,283 - -1.7 222,283 - -1.9 222,320 - +1.2 222,320 - +0.7 222,322 + -0.9 222,323 - -1.2 222,323 - -0.9 222,356 + -0.7 222,357 - -1.0 222,357 - -1.7 222,357 - +0.1 222,357 - -0.8 222,372 - +0.5 222,381 + -2.1 222,382 - +0.5 222,436 + +1.9 222,436 + +0.5 222,436 + +0.1 222,436 + -1.1 222,436 + -1.7 222,436 + -0.1 222,436 + +0.1 222,437 - -1.2 222,437 - -2.4 222,437 - -1.8 222,437 - -1.9 222,437 - -0.1 222,437 - -1.2 222,437 - -1.0 222,523 + -2.2 222,523 + -1.6 222,524 - -1.0 222,524 - -0.9 222,524 - -0.5 222,524 - +0.7 222,524 - -2.2 222,537 + +0.2 222,537 + +0.4 222,537 + -0.2 222,537 + -1.2 222,537 + +0.1 222,537 + +1.3 222,537 + -1.3 222,537 + -0.9 222,538 - -2.1 222,538 - +0.9 222,538 - -2.7 222,538 - +0.5 222,538 - -0.3 222,538 - -0.5 222,572 + -0.3 222,572 + -1.4 222,572 + +0.0 222,572 + -0.0 222,572 + -0.3 222,572 + -0.8 222,572 + -0.6 222,572 + -0.3 222,572 + +0.1 222,572 + -0.4 222,572 + +0.3 222,573 - -1.2 222,573 - -0.1 222,573 - +0.3 222,573 - -0.9 222,573 - -0.6 222,573 - -1.1 222,573 - -1.0 222,573 - +0.5 223,067 + MPMX19_04818 0.79 -0.5 223,067 + MPMX19_04818 0.79 -1.2 223,067 + MPMX19_04818 0.79 -2.4 223,067 + MPMX19_04818 0.79 +0.5 223,067 + MPMX19_04818 0.79 -0.9 223,067 + MPMX19_04818 0.79 +0.6 223,068 - MPMX19_04818 0.79 -0.5 223,068 - MPMX19_04818 0.79 -0.3 223,068 - MPMX19_04818 0.79 -0.4 223,068 - MPMX19_04818 0.79 +2.5 223,068 - MPMX19_04818 0.79 +1.0 223,068 - MPMX19_04818 0.79 -1.9 223,068 - MPMX19_04818 0.79 -1.8 223,068 - MPMX19_04818 0.79 -0.7 223,175 + +0.0 223,175 + -2.0 223,175 + -1.6 223,175 + -0.5 223,175 + -1.0 223,175 + -1.8 223,176 - -2.1 223,176 - -1.1 223,176 - -1.1 223,176 - +0.7 223,197 - -1.0 223,249 + +1.5 223,249 + -1.1 223,249 + +1.2 223,249 + +0.5 223,249 + -1.7 223,249 + -0.3 223,249 + -0.5 223,249 + -0.2 223,250 - -0.1 223,250 - -0.8 223,250 - -0.3 223,250 - -0.3 223,250 - +1.7 223,252 - -0.9
Or see this region's nucleotide sequence