Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04480 and MPMX19_04481 are separated by 233 nucleotides MPMX19_04481 and MPMX19_04482 are separated by 210 nucleotides
MPMX19_04480: MPMX19_04480 - Zinc-type alcohol dehydrogenase-like protein, at 847,605 to 848,606
_04480
MPMX19_04481: MPMX19_04481 - hypothetical protein, at 848,840 to 849,448
_04481
MPMX19_04482: MPMX19_04482 - HTH-type transcriptional regulator DegA, at 849,659 to 850,759
_04482
Position (kb) 848
849
850 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 848.103 kb on + strand, within MPMX19_04480 at 848.103 kb on + strand, within MPMX19_04480 at 848.103 kb on + strand, within MPMX19_04480 at 848.104 kb on - strand, within MPMX19_04480 at 848.104 kb on - strand, within MPMX19_04480 at 848.104 kb on - strand, within MPMX19_04480 at 848.104 kb on - strand, within MPMX19_04480 at 848.104 kb on - strand, within MPMX19_04480 at 848.104 kb on - strand, within MPMX19_04480 at 848.187 kb on + strand, within MPMX19_04480 at 848.187 kb on + strand, within MPMX19_04480 at 848.187 kb on + strand, within MPMX19_04480 at 848.187 kb on + strand, within MPMX19_04480 at 848.187 kb on + strand, within MPMX19_04480 at 848.187 kb on + strand, within MPMX19_04480 at 848.187 kb on + strand, within MPMX19_04480 at 848.187 kb on + strand, within MPMX19_04480 at 848.188 kb on - strand, within MPMX19_04480 at 848.188 kb on - strand, within MPMX19_04480 at 848.188 kb on - strand, within MPMX19_04480 at 848.188 kb on - strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.189 kb on + strand, within MPMX19_04480 at 848.190 kb on - strand, within MPMX19_04480 at 848.190 kb on - strand, within MPMX19_04480 at 848.190 kb on - strand, within MPMX19_04480 at 848.190 kb on - strand, within MPMX19_04480 at 848.190 kb on - strand, within MPMX19_04480 at 848.223 kb on + strand, within MPMX19_04480 at 848.223 kb on + strand, within MPMX19_04480 at 848.224 kb on - strand, within MPMX19_04480 at 848.224 kb on - strand, within MPMX19_04480 at 848.224 kb on - strand, within MPMX19_04480 at 848.370 kb on - strand, within MPMX19_04480 at 848.381 kb on + strand, within MPMX19_04480 at 848.381 kb on + strand, within MPMX19_04480 at 848.381 kb on + strand, within MPMX19_04480 at 848.381 kb on + strand, within MPMX19_04480 at 848.382 kb on - strand, within MPMX19_04480 at 848.428 kb on - strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.498 kb on + strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.499 kb on - strand, within MPMX19_04480 at 848.556 kb on + strand at 848.556 kb on + strand at 848.556 kb on + strand at 848.556 kb on + strand at 848.556 kb on + strand at 848.556 kb on + strand at 848.557 kb on - strand at 848.557 kb on - strand at 848.557 kb on - strand at 848.557 kb on - strand at 848.583 kb on - strand at 848.583 kb on - strand at 848.657 kb on + strand at 848.658 kb on - strand at 848.658 kb on - strand at 848.658 kb on - strand at 848.901 kb on + strand, within MPMX19_04481 at 848.902 kb on - strand, within MPMX19_04481 at 848.902 kb on - strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.027 kb on + strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.028 kb on - strand, within MPMX19_04481 at 849.245 kb on + strand, within MPMX19_04481 at 849.246 kb on - strand, within MPMX19_04481 at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.425 kb on + strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.426 kb on - strand at 849.448 kb on + strand at 849.448 kb on + strand at 849.449 kb on - strand at 849.496 kb on + strand at 849.496 kb on + strand at 849.496 kb on + strand at 849.497 kb on - strand at 849.497 kb on - strand at 849.497 kb on - strand at 849.497 kb on - strand at 849.497 kb on - strand at 849.497 kb on - strand at 849.497 kb on - strand at 849.497 kb on - strand at 850.101 kb on + strand, within MPMX19_04482 at 850.101 kb on + strand, within MPMX19_04482 at 850.101 kb on + strand, within MPMX19_04482 at 850.101 kb on + strand, within MPMX19_04482 at 850.101 kb on + strand, within MPMX19_04482 at 850.102 kb on - strand, within MPMX19_04482 at 850.102 kb on - strand, within MPMX19_04482 at 850.102 kb on - strand, within MPMX19_04482 at 850.102 kb on - strand, within MPMX19_04482 at 850.102 kb on - strand, within MPMX19_04482 at 850.203 kb on + strand, within MPMX19_04482 at 850.203 kb on + strand, within MPMX19_04482 at 850.203 kb on + strand, within MPMX19_04482 at 850.204 kb on - strand, within MPMX19_04482 at 850.341 kb on + strand, within MPMX19_04482 at 850.341 kb on + strand, within MPMX19_04482 at 850.341 kb on + strand, within MPMX19_04482 at 850.342 kb on - strand, within MPMX19_04482 at 850.342 kb on - strand, within MPMX19_04482 at 850.342 kb on - strand, within MPMX19_04482 at 850.342 kb on - strand, within MPMX19_04482 at 850.347 kb on + strand, within MPMX19_04482 at 850.347 kb on + strand, within MPMX19_04482 at 850.347 kb on + strand, within MPMX19_04482 at 850.347 kb on + strand, within MPMX19_04482 at 850.348 kb on - strand, within MPMX19_04482 at 850.348 kb on - strand, within MPMX19_04482 at 850.374 kb on + strand, within MPMX19_04482 at 850.374 kb on + strand, within MPMX19_04482 at 850.374 kb on + strand, within MPMX19_04482
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 848,103 + MPMX19_04480 0.50 +0.2 848,103 + MPMX19_04480 0.50 +0.0 848,103 + MPMX19_04480 0.50 -0.6 848,104 - MPMX19_04480 0.50 +0.8 848,104 - MPMX19_04480 0.50 -0.5 848,104 - MPMX19_04480 0.50 -0.7 848,104 - MPMX19_04480 0.50 +0.3 848,104 - MPMX19_04480 0.50 -0.7 848,104 - MPMX19_04480 0.50 -0.1 848,187 + MPMX19_04480 0.58 +1.0 848,187 + MPMX19_04480 0.58 +0.8 848,187 + MPMX19_04480 0.58 -0.5 848,187 + MPMX19_04480 0.58 -2.5 848,187 + MPMX19_04480 0.58 -0.8 848,187 + MPMX19_04480 0.58 +0.2 848,187 + MPMX19_04480 0.58 -0.8 848,187 + MPMX19_04480 0.58 -0.8 848,188 - MPMX19_04480 0.58 -0.7 848,188 - MPMX19_04480 0.58 -1.2 848,188 - MPMX19_04480 0.58 +0.2 848,188 - MPMX19_04480 0.58 +0.5 848,189 + MPMX19_04480 0.58 -1.0 848,189 + MPMX19_04480 0.58 -0.9 848,189 + MPMX19_04480 0.58 +0.5 848,189 + MPMX19_04480 0.58 -0.0 848,189 + MPMX19_04480 0.58 -1.5 848,189 + MPMX19_04480 0.58 +1.1 848,189 + MPMX19_04480 0.58 -0.1 848,189 + MPMX19_04480 0.58 +0.4 848,189 + MPMX19_04480 0.58 +1.2 848,189 + MPMX19_04480 0.58 +0.3 848,189 + MPMX19_04480 0.58 -1.2 848,189 + MPMX19_04480 0.58 -1.1 848,190 - MPMX19_04480 0.58 -0.2 848,190 - MPMX19_04480 0.58 +0.8 848,190 - MPMX19_04480 0.58 -0.2 848,190 - MPMX19_04480 0.58 -1.2 848,190 - MPMX19_04480 0.58 +0.0 848,223 + MPMX19_04480 0.62 -1.5 848,223 + MPMX19_04480 0.62 -0.3 848,224 - MPMX19_04480 0.62 -1.4 848,224 - MPMX19_04480 0.62 -0.6 848,224 - MPMX19_04480 0.62 -0.7 848,370 - MPMX19_04480 0.76 +0.3 848,381 + MPMX19_04480 0.77 -0.2 848,381 + MPMX19_04480 0.77 -1.5 848,381 + MPMX19_04480 0.77 +0.3 848,381 + MPMX19_04480 0.77 +0.0 848,382 - MPMX19_04480 0.78 -1.9 848,428 - MPMX19_04480 0.82 -0.7 848,498 + MPMX19_04480 0.89 -1.0 848,498 + MPMX19_04480 0.89 -0.6 848,498 + MPMX19_04480 0.89 -0.1 848,498 + MPMX19_04480 0.89 +0.2 848,498 + MPMX19_04480 0.89 -0.2 848,498 + MPMX19_04480 0.89 +0.0 848,498 + MPMX19_04480 0.89 -1.6 848,498 + MPMX19_04480 0.89 -1.5 848,498 + MPMX19_04480 0.89 -0.2 848,498 + MPMX19_04480 0.89 +2.3 848,498 + MPMX19_04480 0.89 +0.1 848,498 + MPMX19_04480 0.89 -0.6 848,498 + MPMX19_04480 0.89 -1.5 848,499 - MPMX19_04480 0.89 +0.3 848,499 - MPMX19_04480 0.89 -1.1 848,499 - MPMX19_04480 0.89 -0.7 848,499 - MPMX19_04480 0.89 -2.0 848,499 - MPMX19_04480 0.89 +0.0 848,499 - MPMX19_04480 0.89 +2.3 848,499 - MPMX19_04480 0.89 +0.4 848,499 - MPMX19_04480 0.89 -1.5 848,499 - MPMX19_04480 0.89 +0.3 848,499 - MPMX19_04480 0.89 +1.3 848,499 - MPMX19_04480 0.89 -0.7 848,499 - MPMX19_04480 0.89 -0.7 848,499 - MPMX19_04480 0.89 -0.8 848,556 + -0.5 848,556 + -0.4 848,556 + +0.0 848,556 + +0.7 848,556 + -1.6 848,556 + -1.0 848,557 - -0.5 848,557 - -1.0 848,557 - -0.5 848,557 - +0.3 848,583 - +3.9 848,583 - -0.8 848,657 + -1.4 848,658 - +0.2 848,658 - +0.8 848,658 - +1.6 848,901 + MPMX19_04481 0.10 -0.8 848,902 - MPMX19_04481 0.10 -0.8 848,902 - MPMX19_04481 0.10 +0.0 849,027 + MPMX19_04481 0.31 -1.7 849,027 + MPMX19_04481 0.31 -1.0 849,027 + MPMX19_04481 0.31 -0.2 849,027 + MPMX19_04481 0.31 -1.2 849,027 + MPMX19_04481 0.31 -0.2 849,027 + MPMX19_04481 0.31 -1.4 849,027 + MPMX19_04481 0.31 +0.4 849,027 + MPMX19_04481 0.31 -0.8 849,027 + MPMX19_04481 0.31 -0.2 849,027 + MPMX19_04481 0.31 +0.5 849,027 + MPMX19_04481 0.31 -2.0 849,027 + MPMX19_04481 0.31 -0.6 849,027 + MPMX19_04481 0.31 +0.4 849,027 + MPMX19_04481 0.31 -0.5 849,027 + MPMX19_04481 0.31 +0.6 849,027 + MPMX19_04481 0.31 +0.0 849,028 - MPMX19_04481 0.31 -0.3 849,028 - MPMX19_04481 0.31 -1.1 849,028 - MPMX19_04481 0.31 -1.0 849,028 - MPMX19_04481 0.31 -1.8 849,028 - MPMX19_04481 0.31 -2.8 849,028 - MPMX19_04481 0.31 -2.2 849,028 - MPMX19_04481 0.31 +0.8 849,028 - MPMX19_04481 0.31 -1.5 849,028 - MPMX19_04481 0.31 +0.0 849,028 - MPMX19_04481 0.31 -0.8 849,028 - MPMX19_04481 0.31 +0.3 849,245 + MPMX19_04481 0.67 -0.1 849,246 - MPMX19_04481 0.67 -1.6 849,425 + -1.4 849,425 + -0.8 849,425 + +0.3 849,425 + -1.2 849,425 + -2.4 849,425 + -0.5 849,425 + -2.2 849,425 + -0.2 849,425 + +0.1 849,425 + -0.8 849,425 + -0.4 849,426 - +0.3 849,426 - +0.4 849,426 - -0.8 849,426 - -1.0 849,426 - -0.2 849,426 - -0.5 849,426 - -0.7 849,426 - -0.5 849,426 - -1.8 849,426 - -0.5 849,426 - -0.8 849,426 - -0.2 849,426 - -0.2 849,426 - -0.5 849,426 - -1.0 849,426 - +1.3 849,426 - -1.0 849,426 - +0.2 849,426 - +0.2 849,448 + -1.4 849,448 + +0.8 849,449 - -0.8 849,496 + -2.1 849,496 + +0.5 849,496 + -0.7 849,497 - -0.2 849,497 - +0.3 849,497 - +1.3 849,497 - +0.3 849,497 - +0.3 849,497 - -0.4 849,497 - -0.5 849,497 - -0.7 850,101 + MPMX19_04482 0.40 -0.5 850,101 + MPMX19_04482 0.40 -1.1 850,101 + MPMX19_04482 0.40 -0.7 850,101 + MPMX19_04482 0.40 -0.2 850,101 + MPMX19_04482 0.40 -0.2 850,102 - MPMX19_04482 0.40 -0.5 850,102 - MPMX19_04482 0.40 +0.3 850,102 - MPMX19_04482 0.40 -2.9 850,102 - MPMX19_04482 0.40 -1.9 850,102 - MPMX19_04482 0.40 -0.8 850,203 + MPMX19_04482 0.49 +0.0 850,203 + MPMX19_04482 0.49 -0.5 850,203 + MPMX19_04482 0.49 +0.5 850,204 - MPMX19_04482 0.50 -0.7 850,341 + MPMX19_04482 0.62 +0.3 850,341 + MPMX19_04482 0.62 +0.0 850,341 + MPMX19_04482 0.62 -0.8 850,342 - MPMX19_04482 0.62 +0.5 850,342 - MPMX19_04482 0.62 -1.4 850,342 - MPMX19_04482 0.62 -0.7 850,342 - MPMX19_04482 0.62 -1.0 850,347 + MPMX19_04482 0.62 +0.0 850,347 + MPMX19_04482 0.62 -0.7 850,347 + MPMX19_04482 0.62 +0.5 850,347 + MPMX19_04482 0.62 +0.3 850,348 - MPMX19_04482 0.63 -1.7 850,348 - MPMX19_04482 0.63 -1.6 850,374 + MPMX19_04482 0.65 -1.0 850,374 + MPMX19_04482 0.65 +1.3 850,374 + MPMX19_04482 0.65 -0.2
Or see this region's nucleotide sequence