Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04116 and MPMX19_04117 overlap by 4 nucleotides MPMX19_04117 and MPMX19_04118 are separated by 95 nucleotides
MPMX19_04116: MPMX19_04116 - Protein-glutamate methylesterase/protein-glutamine glutaminase of group 3 operon, at 425,035 to 426,210
_04116
MPMX19_04117: MPMX19_04117 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 426,207 to 426,974
_04117
MPMX19_04118: MPMX19_04118 - Sensor histidine kinase RcsC, at 427,070 to 428,731
_04118
Position (kb) 426
427 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 425.416 kb on + strand, within MPMX19_04116 at 425.745 kb on + strand, within MPMX19_04116 at 425.745 kb on + strand, within MPMX19_04116 at 425.745 kb on + strand, within MPMX19_04116 at 425.745 kb on + strand, within MPMX19_04116 at 425.746 kb on - strand, within MPMX19_04116 at 425.746 kb on - strand, within MPMX19_04116 at 425.746 kb on - strand, within MPMX19_04116 at 425.746 kb on - strand, within MPMX19_04116 at 425.746 kb on - strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.851 kb on + strand, within MPMX19_04116 at 425.852 kb on - strand, within MPMX19_04116 at 425.852 kb on - strand, within MPMX19_04116 at 425.852 kb on - strand, within MPMX19_04116 at 425.852 kb on - strand, within MPMX19_04116 at 425.852 kb on - strand, within MPMX19_04116 at 425.852 kb on - strand, within MPMX19_04116 at 425.852 kb on - strand, within MPMX19_04116 at 425.852 kb on - strand, within MPMX19_04116 at 425.975 kb on - strand, within MPMX19_04116 at 426.061 kb on + strand, within MPMX19_04116 at 426.061 kb on + strand, within MPMX19_04116 at 426.061 kb on + strand, within MPMX19_04116 at 426.061 kb on + strand, within MPMX19_04116 at 426.061 kb on + strand, within MPMX19_04116 at 426.061 kb on + strand, within MPMX19_04116 at 426.068 kb on + strand, within MPMX19_04116 at 426.084 kb on + strand, within MPMX19_04116 at 426.084 kb on + strand, within MPMX19_04116 at 426.084 kb on + strand, within MPMX19_04116 at 426.922 kb on - strand at 426.972 kb on + strand at 426.972 kb on + strand at 426.972 kb on + strand at 426.972 kb on + strand at 426.973 kb on - strand at 426.973 kb on - strand at 426.973 kb on - strand at 426.973 kb on - strand at 426.984 kb on - strand at 427.023 kb on - strand at 427.400 kb on + strand, within MPMX19_04118 at 427.400 kb on + strand, within MPMX19_04118
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 425,416 + MPMX19_04116 0.32 -1.6 425,745 + MPMX19_04116 0.60 -0.5 425,745 + MPMX19_04116 0.60 +1.0 425,745 + MPMX19_04116 0.60 -0.7 425,745 + MPMX19_04116 0.60 -1.6 425,746 - MPMX19_04116 0.60 -1.7 425,746 - MPMX19_04116 0.60 -0.2 425,746 - MPMX19_04116 0.60 -0.6 425,746 - MPMX19_04116 0.60 +0.5 425,746 - MPMX19_04116 0.60 -0.6 425,851 + MPMX19_04116 0.69 -0.1 425,851 + MPMX19_04116 0.69 -0.8 425,851 + MPMX19_04116 0.69 -1.6 425,851 + MPMX19_04116 0.69 -2.1 425,851 + MPMX19_04116 0.69 -0.2 425,851 + MPMX19_04116 0.69 -1.1 425,851 + MPMX19_04116 0.69 -1.6 425,851 + MPMX19_04116 0.69 -0.3 425,851 + MPMX19_04116 0.69 -0.2 425,852 - MPMX19_04116 0.69 -0.6 425,852 - MPMX19_04116 0.69 -1.2 425,852 - MPMX19_04116 0.69 -2.1 425,852 - MPMX19_04116 0.69 -0.3 425,852 - MPMX19_04116 0.69 -2.1 425,852 - MPMX19_04116 0.69 -0.6 425,852 - MPMX19_04116 0.69 +0.4 425,852 - MPMX19_04116 0.69 -1.6 425,975 - MPMX19_04116 0.80 -1.4 426,061 + MPMX19_04116 0.87 -0.2 426,061 + MPMX19_04116 0.87 +0.8 426,061 + MPMX19_04116 0.87 -1.3 426,061 + MPMX19_04116 0.87 -0.2 426,061 + MPMX19_04116 0.87 +1.6 426,061 + MPMX19_04116 0.87 -0.6 426,068 + MPMX19_04116 0.88 -0.5 426,084 + MPMX19_04116 0.89 +0.3 426,084 + MPMX19_04116 0.89 -1.5 426,084 + MPMX19_04116 0.89 -0.5 426,922 - -1.0 426,972 + -2.8 426,972 + -0.6 426,972 + +0.4 426,972 + +0.1 426,973 - -0.5 426,973 - -0.6 426,973 - +1.0 426,973 - +0.8 426,984 - +0.5 427,023 - -1.0 427,400 + MPMX19_04118 0.20 -0.3 427,400 + MPMX19_04118 0.20 -0.8
Or see this region's nucleotide sequence