Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03977 and MPMX19_03978 overlap by 20 nucleotides MPMX19_03978 and MPMX19_03979 are separated by 254 nucleotides MPMX19_03979 and MPMX19_03980 are separated by 165 nucleotides
MPMX19_03977: MPMX19_03977 - Diaminopropionate ammonia-lyase, at 267,525 to 268,778
_03977
MPMX19_03978: MPMX19_03978 - hypothetical protein, at 268,759 to 269,481
_03978
MPMX19_03979: MPMX19_03979 - Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, at 269,736 to 271,187
_03979
MPMX19_03980: MPMX19_03980 - Sensor protein FixL, at 271,353 to 273,155
_03980
Position (kb) 269
270
271
272 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 268.994 kb on + strand, within MPMX19_03978 at 269.015 kb on + strand, within MPMX19_03978 at 269.015 kb on + strand, within MPMX19_03978 at 269.015 kb on + strand, within MPMX19_03978 at 269.015 kb on + strand, within MPMX19_03978 at 269.015 kb on + strand, within MPMX19_03978 at 269.016 kb on - strand, within MPMX19_03978 at 269.016 kb on - strand, within MPMX19_03978 at 269.016 kb on - strand, within MPMX19_03978 at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.543 kb on + strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.544 kb on - strand at 269.572 kb on + strand at 269.572 kb on + strand at 269.572 kb on + strand at 269.572 kb on + strand at 269.584 kb on + strand at 269.585 kb on - strand at 271.287 kb on - strand at 271.428 kb on + strand at 271.429 kb on - strand at 271.429 kb on - strand at 271.746 kb on + strand, within MPMX19_03980 at 271.746 kb on + strand, within MPMX19_03980 at 271.746 kb on + strand, within MPMX19_03980 at 271.746 kb on + strand, within MPMX19_03980 at 271.746 kb on + strand, within MPMX19_03980 at 271.746 kb on + strand, within MPMX19_03980 at 271.747 kb on - strand, within MPMX19_03980 at 271.747 kb on - strand, within MPMX19_03980 at 271.747 kb on - strand, within MPMX19_03980 at 271.747 kb on - strand, within MPMX19_03980 at 271.752 kb on + strand, within MPMX19_03980 at 271.752 kb on + strand, within MPMX19_03980 at 271.752 kb on + strand, within MPMX19_03980 at 271.752 kb on + strand, within MPMX19_03980 at 271.753 kb on - strand, within MPMX19_03980 at 271.753 kb on - strand, within MPMX19_03980 at 271.753 kb on - strand, within MPMX19_03980 at 271.753 kb on - strand, within MPMX19_03980 at 271.758 kb on + strand, within MPMX19_03980 at 271.758 kb on + strand, within MPMX19_03980 at 271.758 kb on + strand, within MPMX19_03980 at 271.759 kb on - strand, within MPMX19_03980 at 271.759 kb on - strand, within MPMX19_03980 at 271.845 kb on + strand, within MPMX19_03980 at 271.845 kb on + strand, within MPMX19_03980 at 271.845 kb on + strand, within MPMX19_03980 at 271.845 kb on + strand, within MPMX19_03980 at 271.846 kb on - strand, within MPMX19_03980 at 271.945 kb on + strand, within MPMX19_03980 at 272.058 kb on + strand, within MPMX19_03980 at 272.058 kb on + strand, within MPMX19_03980 at 272.058 kb on + strand, within MPMX19_03980 at 272.059 kb on - strand, within MPMX19_03980 at 272.059 kb on - strand, within MPMX19_03980 at 272.059 kb on - strand, within MPMX19_03980
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 268,994 + MPMX19_03978 0.33 +0.2 269,015 + MPMX19_03978 0.35 +0.0 269,015 + MPMX19_03978 0.35 -1.8 269,015 + MPMX19_03978 0.35 -0.1 269,015 + MPMX19_03978 0.35 -0.7 269,015 + MPMX19_03978 0.35 -1.8 269,016 - MPMX19_03978 0.36 -0.7 269,016 - MPMX19_03978 0.36 -1.4 269,016 - MPMX19_03978 0.36 -0.8 269,543 + +0.5 269,543 + -0.1 269,543 + -1.1 269,543 + -0.8 269,543 + -0.7 269,543 + -0.4 269,543 + +0.7 269,543 + -1.1 269,543 + +0.7 269,543 + +0.9 269,543 + +0.7 269,543 + +0.3 269,543 + -1.6 269,543 + -0.4 269,543 + -1.1 269,543 + -1.0 269,543 + -0.3 269,543 + -0.7 269,543 + -0.4 269,543 + -2.8 269,543 + -0.4 269,543 + -0.6 269,543 + +0.0 269,543 + -2.2 269,543 + -1.6 269,543 + -0.3 269,543 + -0.1 269,544 - +0.2 269,544 - -0.5 269,544 - -0.1 269,544 - -0.1 269,544 - -1.5 269,544 - +0.3 269,544 - -1.8 269,544 - -0.3 269,544 - -1.4 269,544 - -0.6 269,544 - +0.1 269,544 - -1.2 269,544 - -1.6 269,544 - -1.3 269,544 - -0.5 269,544 - -1.1 269,544 - -0.6 269,544 - -1.6 269,544 - -0.9 269,544 - -3.0 269,544 - -0.3 269,544 - -0.8 269,544 - -1.8 269,544 - -2.1 269,544 - -0.6 269,544 - +0.3 269,544 - -0.4 269,544 - -0.6 269,544 - -1.5 269,572 + -0.6 269,572 + -0.2 269,572 + -0.5 269,572 + -1.2 269,584 + -1.8 269,585 - -1.5 271,287 - -0.8 271,428 + -1.0 271,429 - -1.3 271,429 - -0.4 271,746 + MPMX19_03980 0.22 +0.0 271,746 + MPMX19_03980 0.22 +0.0 271,746 + MPMX19_03980 0.22 -1.4 271,746 + MPMX19_03980 0.22 -0.5 271,746 + MPMX19_03980 0.22 -0.3 271,746 + MPMX19_03980 0.22 -1.0 271,747 - MPMX19_03980 0.22 -0.5 271,747 - MPMX19_03980 0.22 -0.8 271,747 - MPMX19_03980 0.22 +1.1 271,747 - MPMX19_03980 0.22 -1.2 271,752 + MPMX19_03980 0.22 -2.3 271,752 + MPMX19_03980 0.22 -2.1 271,752 + MPMX19_03980 0.22 -1.1 271,752 + MPMX19_03980 0.22 -0.8 271,753 - MPMX19_03980 0.22 -1.2 271,753 - MPMX19_03980 0.22 -0.9 271,753 - MPMX19_03980 0.22 -1.3 271,753 - MPMX19_03980 0.22 +0.0 271,758 + MPMX19_03980 0.22 -0.1 271,758 + MPMX19_03980 0.22 -2.2 271,758 + MPMX19_03980 0.22 -0.1 271,759 - MPMX19_03980 0.23 -1.1 271,759 - MPMX19_03980 0.23 +0.5 271,845 + MPMX19_03980 0.27 +1.3 271,845 + MPMX19_03980 0.27 -1.1 271,845 + MPMX19_03980 0.27 -0.5 271,845 + MPMX19_03980 0.27 -0.6 271,846 - MPMX19_03980 0.27 +0.3 271,945 + MPMX19_03980 0.33 +0.0 272,058 + MPMX19_03980 0.39 +1.3 272,058 + MPMX19_03980 0.39 -2.1 272,058 + MPMX19_03980 0.39 +0.0 272,059 - MPMX19_03980 0.39 +0.1 272,059 - MPMX19_03980 0.39 -0.1 272,059 - MPMX19_03980 0.39 -0.5
Or see this region's nucleotide sequence