Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03866 and MPMX19_03867 overlap by 4 nucleotides MPMX19_03867 and MPMX19_03868 overlap by 4 nucleotides MPMX19_03868 and MPMX19_03869 are separated by 28 nucleotides
MPMX19_03865: MPMX19_03865 - Arabinose import ATP-binding protein AraG, at 112,066 to 113,607
_03865
MPMX19_03866: MPMX19_03866 - Ribose import permease protein RbsC, at 113,604 to 114,608
_03866
MPMX19_03867: MPMX19_03867 - Ribose import permease protein RbsC, at 114,605 to 115,612
_03867
MPMX19_03868: MPMX19_03868 - Xylitol-binding protein, at 115,609 to 116,571
_03868
MPMX19_03869: MPMX19_03869 - hypothetical protein, at 116,600 to 117,493
_03869
Position (kb) 114
115
116 Strain fitness (log2 ratio) -2
-1
0
1 at 114.186 kb on + strand, within MPMX19_03866 at 114.187 kb on - strand, within MPMX19_03866 at 114.187 kb on - strand, within MPMX19_03866 at 114.258 kb on + strand, within MPMX19_03866 at 114.258 kb on + strand, within MPMX19_03866 at 114.259 kb on - strand, within MPMX19_03866 at 115.277 kb on + strand, within MPMX19_03867 at 115.278 kb on - strand, within MPMX19_03867 at 116.008 kb on + strand, within MPMX19_03868 at 116.008 kb on + strand, within MPMX19_03868 at 116.009 kb on - strand, within MPMX19_03868 at 116.009 kb on - strand, within MPMX19_03868 at 116.009 kb on - strand, within MPMX19_03868 at 116.257 kb on + strand, within MPMX19_03868 at 116.257 kb on + strand, within MPMX19_03868 at 116.257 kb on + strand, within MPMX19_03868 at 116.258 kb on - strand, within MPMX19_03868 at 116.258 kb on - strand, within MPMX19_03868 at 116.258 kb on - strand, within MPMX19_03868 at 116.258 kb on - strand, within MPMX19_03868 at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.534 kb on + strand at 116.535 kb on - strand at 116.535 kb on - strand at 116.535 kb on - strand at 116.535 kb on - strand at 116.535 kb on - strand at 116.535 kb on - strand at 116.535 kb on - strand at 116.535 kb on - strand at 116.560 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.573 kb on + strand at 116.574 kb on - strand at 116.574 kb on - strand at 116.574 kb on - strand at 116.574 kb on - strand at 116.574 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 114,186 + MPMX19_03866 0.58 -1.3 114,187 - MPMX19_03866 0.58 -0.7 114,187 - MPMX19_03866 0.58 -1.0 114,258 + MPMX19_03866 0.65 +1.6 114,258 + MPMX19_03866 0.65 -0.3 114,259 - MPMX19_03866 0.65 +0.9 115,277 + MPMX19_03867 0.67 +1.0 115,278 - MPMX19_03867 0.67 -1.5 116,008 + MPMX19_03868 0.41 +0.7 116,008 + MPMX19_03868 0.41 -0.7 116,009 - MPMX19_03868 0.42 -0.8 116,009 - MPMX19_03868 0.42 +0.0 116,009 - MPMX19_03868 0.42 +0.7 116,257 + MPMX19_03868 0.67 -0.7 116,257 + MPMX19_03868 0.67 +0.9 116,257 + MPMX19_03868 0.67 -0.6 116,258 - MPMX19_03868 0.67 +0.0 116,258 - MPMX19_03868 0.67 -1.4 116,258 - MPMX19_03868 0.67 -1.0 116,258 - MPMX19_03868 0.67 +0.3 116,534 + -2.6 116,534 + -0.8 116,534 + +0.0 116,534 + +1.5 116,534 + -0.1 116,534 + -0.3 116,534 + +1.3 116,534 + -0.9 116,534 + -1.0 116,534 + -2.5 116,534 + +0.5 116,534 + -0.8 116,534 + -0.8 116,534 + -0.3 116,535 - -0.6 116,535 - +0.0 116,535 - -1.8 116,535 - -0.9 116,535 - -0.9 116,535 - -1.4 116,535 - -1.0 116,535 - -0.8 116,560 + -0.5 116,573 + +0.9 116,573 + -1.0 116,573 + -1.4 116,573 + -0.6 116,573 + -0.5 116,573 + +0.2 116,573 + -1.2 116,573 + +1.3 116,573 + -0.2 116,573 + +0.5 116,573 + -0.4 116,573 + -2.1 116,573 + -1.0 116,573 + -0.3 116,573 + -0.8 116,573 + -1.2 116,573 + -0.7 116,574 - -1.4 116,574 - -0.5 116,574 - +0.0 116,574 - -0.1 116,574 - -1.1
Or see this region's nucleotide sequence