Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03594 and MPMX19_03595 are separated by 131 nucleotides MPMX19_03595 and MPMX19_03596 are separated by 75 nucleotides
MPMX19_03594: MPMX19_03594 - Aspartate ammonia-lyase, at 1,020,099 to 1,021,514
_03594
MPMX19_03595: MPMX19_03595 - C4-dicarboxylate transport protein 2, at 1,021,646 to 1,022,923
_03595
MPMX19_03596: MPMX19_03596 - C4-dicarboxylate transport sensor protein DctB, at 1,022,999 to 1,024,888
_03596
Position (kb)
1021
1022
1023 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1020.714 kb on + strand, within MPMX19_03594 at 1020.714 kb on + strand, within MPMX19_03594 at 1020.714 kb on + strand, within MPMX19_03594 at 1020.714 kb on + strand, within MPMX19_03594 at 1020.714 kb on + strand, within MPMX19_03594 at 1020.714 kb on + strand, within MPMX19_03594 at 1020.714 kb on + strand, within MPMX19_03594 at 1020.715 kb on - strand, within MPMX19_03594 at 1020.715 kb on - strand, within MPMX19_03594 at 1020.715 kb on - strand, within MPMX19_03594 at 1020.715 kb on - strand, within MPMX19_03594 at 1020.829 kb on - strand, within MPMX19_03594 at 1020.829 kb on - strand, within MPMX19_03594 at 1020.829 kb on - strand, within MPMX19_03594 at 1020.829 kb on - strand, within MPMX19_03594 at 1021.347 kb on + strand, within MPMX19_03594 at 1021.347 kb on + strand, within MPMX19_03594 at 1021.347 kb on + strand, within MPMX19_03594 at 1021.347 kb on + strand, within MPMX19_03594 at 1021.348 kb on - strand, within MPMX19_03594 at 1021.348 kb on - strand, within MPMX19_03594 at 1021.556 kb on + strand at 1021.636 kb on + strand at 1021.636 kb on + strand at 1021.637 kb on - strand at 1021.637 kb on - strand at 1021.637 kb on - strand at 1021.703 kb on + strand at 1021.704 kb on - strand at 1021.704 kb on - strand at 1021.704 kb on - strand at 1021.704 kb on - strand at 1021.754 kb on + strand at 1021.755 kb on - strand at 1021.755 kb on - strand at 1021.755 kb on - strand at 1021.755 kb on - strand at 1022.219 kb on + strand, within MPMX19_03595 at 1022.219 kb on + strand, within MPMX19_03595 at 1022.219 kb on + strand, within MPMX19_03595 at 1022.219 kb on + strand, within MPMX19_03595 at 1022.219 kb on + strand, within MPMX19_03595 at 1022.219 kb on + strand, within MPMX19_03595 at 1022.219 kb on + strand, within MPMX19_03595 at 1022.219 kb on + strand, within MPMX19_03595 at 1022.220 kb on - strand, within MPMX19_03595 at 1022.220 kb on - strand, within MPMX19_03595 at 1022.220 kb on - strand, within MPMX19_03595 at 1022.220 kb on - strand, within MPMX19_03595 at 1022.220 kb on - strand, within MPMX19_03595 at 1022.303 kb on + strand, within MPMX19_03595 at 1022.303 kb on + strand, within MPMX19_03595 at 1022.303 kb on + strand, within MPMX19_03595 at 1022.304 kb on - strand, within MPMX19_03595 at 1022.304 kb on - strand, within MPMX19_03595 at 1022.327 kb on + strand, within MPMX19_03595 at 1022.327 kb on + strand, within MPMX19_03595 at 1022.327 kb on + strand, within MPMX19_03595 at 1022.327 kb on + strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.328 kb on - strand, within MPMX19_03595 at 1022.540 kb on + strand, within MPMX19_03595 at 1022.541 kb on - strand, within MPMX19_03595 at 1022.541 kb on - strand, within MPMX19_03595 at 1022.570 kb on + strand, within MPMX19_03595 at 1022.570 kb on + strand, within MPMX19_03595 at 1022.570 kb on + strand, within MPMX19_03595 at 1022.571 kb on - strand, within MPMX19_03595 at 1022.571 kb on - strand, within MPMX19_03595 at 1022.571 kb on - strand, within MPMX19_03595 at 1022.606 kb on + strand, within MPMX19_03595 at 1022.606 kb on + strand, within MPMX19_03595 at 1022.606 kb on + strand, within MPMX19_03595 at 1022.606 kb on + strand, within MPMX19_03595 at 1022.607 kb on - strand, within MPMX19_03595 at 1022.607 kb on - strand, within MPMX19_03595 at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.998 kb on + strand at 1022.999 kb on - strand at 1022.999 kb on - strand at 1022.999 kb on - strand at 1022.999 kb on - strand at 1022.999 kb on - strand at 1022.999 kb on - strand at 1023.200 kb on + strand, within MPMX19_03596 at 1023.200 kb on + strand, within MPMX19_03596 at 1023.200 kb on + strand, within MPMX19_03596 at 1023.201 kb on - strand, within MPMX19_03596 at 1023.201 kb on - strand, within MPMX19_03596 at 1023.201 kb on - strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.233 kb on + strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.234 kb on - strand, within MPMX19_03596 at 1023.239 kb on + strand, within MPMX19_03596 at 1023.239 kb on + strand, within MPMX19_03596 at 1023.240 kb on - strand, within MPMX19_03596 at 1023.240 kb on - strand, within MPMX19_03596 at 1023.240 kb on - strand, within MPMX19_03596 at 1023.240 kb on - strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.365 kb on + strand, within MPMX19_03596 at 1023.366 kb on - strand, within MPMX19_03596 at 1023.366 kb on - strand, within MPMX19_03596 at 1023.366 kb on - strand, within MPMX19_03596 at 1023.366 kb on - strand, within MPMX19_03596 at 1023.366 kb on - strand, within MPMX19_03596 at 1023.447 kb on - strand, within MPMX19_03596 at 1023.456 kb on - strand, within MPMX19_03596 at 1023.456 kb on - strand, within MPMX19_03596 at 1023.527 kb on + strand, within MPMX19_03596 at 1023.528 kb on - strand, within MPMX19_03596 at 1023.528 kb on - strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.530 kb on + strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.531 kb on - strand, within MPMX19_03596 at 1023.752 kb on + strand, within MPMX19_03596 at 1023.752 kb on + strand, within MPMX19_03596 at 1023.752 kb on + strand, within MPMX19_03596 at 1023.752 kb on + strand, within MPMX19_03596 at 1023.752 kb on + strand, within MPMX19_03596 at 1023.752 kb on + strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596 at 1023.753 kb on - strand, within MPMX19_03596
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,020,714 + MPMX19_03594 0.43 -1.6 1,020,714 + MPMX19_03594 0.43 +0.1 1,020,714 + MPMX19_03594 0.43 -1.2 1,020,714 + MPMX19_03594 0.43 +0.3 1,020,714 + MPMX19_03594 0.43 -1.9 1,020,714 + MPMX19_03594 0.43 +1.1 1,020,714 + MPMX19_03594 0.43 -0.6 1,020,715 - MPMX19_03594 0.44 -0.2 1,020,715 - MPMX19_03594 0.44 -0.8 1,020,715 - MPMX19_03594 0.44 +0.2 1,020,715 - MPMX19_03594 0.44 +0.2 1,020,829 - MPMX19_03594 0.52 -0.9 1,020,829 - MPMX19_03594 0.52 +0.6 1,020,829 - MPMX19_03594 0.52 -0.5 1,020,829 - MPMX19_03594 0.52 -1.5 1,021,347 + MPMX19_03594 0.88 -2.1 1,021,347 + MPMX19_03594 0.88 -0.8 1,021,347 + MPMX19_03594 0.88 -1.6 1,021,347 + MPMX19_03594 0.88 -0.6 1,021,348 - MPMX19_03594 0.88 -1.4 1,021,348 - MPMX19_03594 0.88 +2.4 1,021,556 + -1.2 1,021,636 + +0.8 1,021,636 + +2.1 1,021,637 - -0.1 1,021,637 - +0.8 1,021,637 - -1.9 1,021,703 + +0.8 1,021,704 - -0.6 1,021,704 - +0.6 1,021,704 - -0.4 1,021,704 - +1.4 1,021,754 + -0.3 1,021,755 - +2.4 1,021,755 - -0.5 1,021,755 - -1.4 1,021,755 - -0.2 1,022,219 + MPMX19_03595 0.45 -1.4 1,022,219 + MPMX19_03595 0.45 +0.1 1,022,219 + MPMX19_03595 0.45 -0.4 1,022,219 + MPMX19_03595 0.45 -1.5 1,022,219 + MPMX19_03595 0.45 +0.7 1,022,219 + MPMX19_03595 0.45 -0.2 1,022,219 + MPMX19_03595 0.45 -1.2 1,022,219 + MPMX19_03595 0.45 +0.8 1,022,220 - MPMX19_03595 0.45 -0.1 1,022,220 - MPMX19_03595 0.45 -0.1 1,022,220 - MPMX19_03595 0.45 +0.8 1,022,220 - MPMX19_03595 0.45 -0.2 1,022,220 - MPMX19_03595 0.45 +0.8 1,022,303 + MPMX19_03595 0.51 +0.6 1,022,303 + MPMX19_03595 0.51 -0.4 1,022,303 + MPMX19_03595 0.51 -0.2 1,022,304 - MPMX19_03595 0.51 +0.8 1,022,304 - MPMX19_03595 0.51 +1.0 1,022,327 + MPMX19_03595 0.53 -0.0 1,022,327 + MPMX19_03595 0.53 +0.0 1,022,327 + MPMX19_03595 0.53 -0.2 1,022,327 + MPMX19_03595 0.53 -0.6 1,022,328 - MPMX19_03595 0.53 +0.0 1,022,328 - MPMX19_03595 0.53 +0.4 1,022,328 - MPMX19_03595 0.53 -1.8 1,022,328 - MPMX19_03595 0.53 +1.6 1,022,328 - MPMX19_03595 0.53 +0.6 1,022,328 - MPMX19_03595 0.53 -0.1 1,022,328 - MPMX19_03595 0.53 +0.7 1,022,328 - MPMX19_03595 0.53 +0.8 1,022,328 - MPMX19_03595 0.53 +1.4 1,022,328 - MPMX19_03595 0.53 -1.2 1,022,328 - MPMX19_03595 0.53 -1.4 1,022,328 - MPMX19_03595 0.53 +0.3 1,022,328 - MPMX19_03595 0.53 -0.6 1,022,540 + MPMX19_03595 0.70 -1.5 1,022,541 - MPMX19_03595 0.70 -0.6 1,022,541 - MPMX19_03595 0.70 +0.1 1,022,570 + MPMX19_03595 0.72 -0.7 1,022,570 + MPMX19_03595 0.72 -1.5 1,022,570 + MPMX19_03595 0.72 +0.5 1,022,571 - MPMX19_03595 0.72 +1.4 1,022,571 - MPMX19_03595 0.72 -0.7 1,022,571 - MPMX19_03595 0.72 +1.1 1,022,606 + MPMX19_03595 0.75 +0.1 1,022,606 + MPMX19_03595 0.75 -0.1 1,022,606 + MPMX19_03595 0.75 +0.1 1,022,606 + MPMX19_03595 0.75 -0.2 1,022,607 - MPMX19_03595 0.75 +0.4 1,022,607 - MPMX19_03595 0.75 -1.6 1,022,998 + -1.4 1,022,998 + -0.2 1,022,998 + -0.4 1,022,998 + +1.2 1,022,998 + +0.3 1,022,998 + -1.9 1,022,998 + +0.1 1,022,998 + +0.2 1,022,998 + +1.1 1,022,998 + -0.2 1,022,998 + +0.1 1,022,998 + -0.5 1,022,999 - -1.4 1,022,999 - +0.4 1,022,999 - -0.0 1,022,999 - -0.9 1,022,999 - -0.6 1,022,999 - -2.2 1,023,200 + MPMX19_03596 0.11 +0.6 1,023,200 + MPMX19_03596 0.11 +2.0 1,023,200 + MPMX19_03596 0.11 +0.2 1,023,201 - MPMX19_03596 0.11 -1.0 1,023,201 - MPMX19_03596 0.11 -0.8 1,023,201 - MPMX19_03596 0.11 -0.8 1,023,233 + MPMX19_03596 0.12 +0.6 1,023,233 + MPMX19_03596 0.12 -1.4 1,023,233 + MPMX19_03596 0.12 +1.4 1,023,233 + MPMX19_03596 0.12 -0.2 1,023,233 + MPMX19_03596 0.12 -0.2 1,023,233 + MPMX19_03596 0.12 -1.3 1,023,233 + MPMX19_03596 0.12 +1.4 1,023,233 + MPMX19_03596 0.12 -1.2 1,023,233 + MPMX19_03596 0.12 -0.3 1,023,233 + MPMX19_03596 0.12 -1.0 1,023,233 + MPMX19_03596 0.12 +0.8 1,023,234 - MPMX19_03596 0.12 -1.8 1,023,234 - MPMX19_03596 0.12 +0.1 1,023,234 - MPMX19_03596 0.12 +0.2 1,023,234 - MPMX19_03596 0.12 +0.2 1,023,234 - MPMX19_03596 0.12 +0.4 1,023,234 - MPMX19_03596 0.12 -0.4 1,023,234 - MPMX19_03596 0.12 -1.3 1,023,234 - MPMX19_03596 0.12 -0.9 1,023,234 - MPMX19_03596 0.12 +1.1 1,023,234 - MPMX19_03596 0.12 +2.1 1,023,234 - MPMX19_03596 0.12 -1.0 1,023,234 - MPMX19_03596 0.12 -0.4 1,023,234 - MPMX19_03596 0.12 -0.8 1,023,234 - MPMX19_03596 0.12 -0.2 1,023,234 - MPMX19_03596 0.12 -1.5 1,023,234 - MPMX19_03596 0.12 -0.8 1,023,234 - MPMX19_03596 0.12 -1.1 1,023,234 - MPMX19_03596 0.12 -2.6 1,023,239 + MPMX19_03596 0.13 -0.2 1,023,239 + MPMX19_03596 0.13 +0.2 1,023,240 - MPMX19_03596 0.13 +0.7 1,023,240 - MPMX19_03596 0.13 -1.5 1,023,240 - MPMX19_03596 0.13 +1.1 1,023,240 - MPMX19_03596 0.13 -0.0 1,023,365 + MPMX19_03596 0.19 -0.6 1,023,365 + MPMX19_03596 0.19 +1.8 1,023,365 + MPMX19_03596 0.19 +0.8 1,023,365 + MPMX19_03596 0.19 -0.2 1,023,365 + MPMX19_03596 0.19 -0.9 1,023,365 + MPMX19_03596 0.19 -0.6 1,023,365 + MPMX19_03596 0.19 +1.4 1,023,365 + MPMX19_03596 0.19 -0.6 1,023,365 + MPMX19_03596 0.19 +0.1 1,023,365 + MPMX19_03596 0.19 -0.0 1,023,365 + MPMX19_03596 0.19 +1.4 1,023,365 + MPMX19_03596 0.19 +0.8 1,023,365 + MPMX19_03596 0.19 +0.4 1,023,366 - MPMX19_03596 0.19 -0.5 1,023,366 - MPMX19_03596 0.19 -0.5 1,023,366 - MPMX19_03596 0.19 +0.1 1,023,366 - MPMX19_03596 0.19 -0.5 1,023,366 - MPMX19_03596 0.19 -0.6 1,023,447 - MPMX19_03596 0.24 -0.8 1,023,456 - MPMX19_03596 0.24 +0.6 1,023,456 - MPMX19_03596 0.24 +0.6 1,023,527 + MPMX19_03596 0.28 -1.2 1,023,528 - MPMX19_03596 0.28 -1.6 1,023,528 - MPMX19_03596 0.28 -0.7 1,023,530 + MPMX19_03596 0.28 +0.0 1,023,530 + MPMX19_03596 0.28 -1.2 1,023,530 + MPMX19_03596 0.28 +1.1 1,023,530 + MPMX19_03596 0.28 -1.0 1,023,530 + MPMX19_03596 0.28 -0.3 1,023,530 + MPMX19_03596 0.28 +0.4 1,023,530 + MPMX19_03596 0.28 -0.4 1,023,530 + MPMX19_03596 0.28 -1.5 1,023,530 + MPMX19_03596 0.28 +0.4 1,023,530 + MPMX19_03596 0.28 -1.2 1,023,530 + MPMX19_03596 0.28 -0.9 1,023,530 + MPMX19_03596 0.28 -0.3 1,023,530 + MPMX19_03596 0.28 +2.4 1,023,531 - MPMX19_03596 0.28 +1.0 1,023,531 - MPMX19_03596 0.28 -0.4 1,023,531 - MPMX19_03596 0.28 -0.8 1,023,531 - MPMX19_03596 0.28 -1.1 1,023,531 - MPMX19_03596 0.28 -1.2 1,023,531 - MPMX19_03596 0.28 -1.3 1,023,531 - MPMX19_03596 0.28 -0.3 1,023,531 - MPMX19_03596 0.28 -0.3 1,023,531 - MPMX19_03596 0.28 -0.9 1,023,531 - MPMX19_03596 0.28 +0.3 1,023,752 + MPMX19_03596 0.40 -0.8 1,023,752 + MPMX19_03596 0.40 +0.7 1,023,752 + MPMX19_03596 0.40 -0.7 1,023,752 + MPMX19_03596 0.40 -0.8 1,023,752 + MPMX19_03596 0.40 +0.0 1,023,752 + MPMX19_03596 0.40 +0.1 1,023,753 - MPMX19_03596 0.40 -0.8 1,023,753 - MPMX19_03596 0.40 +0.2 1,023,753 - MPMX19_03596 0.40 -0.2 1,023,753 - MPMX19_03596 0.40 +0.4 1,023,753 - MPMX19_03596 0.40 -2.0 1,023,753 - MPMX19_03596 0.40 +1.4 1,023,753 - MPMX19_03596 0.40 +0.8 1,023,753 - MPMX19_03596 0.40 -0.2 1,023,753 - MPMX19_03596 0.40 -0.9 1,023,753 - MPMX19_03596 0.40 -1.4 1,023,753 - MPMX19_03596 0.40 -0.3 1,023,753 - MPMX19_03596 0.40 -1.9
Or see this region's nucleotide sequence