Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03595

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_03594 and MPMX19_03595 are separated by 131 nucleotidesMPMX19_03595 and MPMX19_03596 are separated by 75 nucleotides MPMX19_03594: MPMX19_03594 - Aspartate ammonia-lyase, at 1,020,099 to 1,021,514 _03594 MPMX19_03595: MPMX19_03595 - C4-dicarboxylate transport protein 2, at 1,021,646 to 1,022,923 _03595 MPMX19_03596: MPMX19_03596 - C4-dicarboxylate transport sensor protein DctB, at 1,022,999 to 1,024,888 _03596 Position (kb) 1021 1022 1023Strain fitness (log2 ratio) -2 -1 0 1 2at 1020.714 kb on + strand, within MPMX19_03594at 1020.714 kb on + strand, within MPMX19_03594at 1020.714 kb on + strand, within MPMX19_03594at 1020.714 kb on + strand, within MPMX19_03594at 1020.714 kb on + strand, within MPMX19_03594at 1020.714 kb on + strand, within MPMX19_03594at 1020.714 kb on + strand, within MPMX19_03594at 1020.715 kb on - strand, within MPMX19_03594at 1020.715 kb on - strand, within MPMX19_03594at 1020.715 kb on - strand, within MPMX19_03594at 1020.715 kb on - strand, within MPMX19_03594at 1020.829 kb on - strand, within MPMX19_03594at 1020.829 kb on - strand, within MPMX19_03594at 1020.829 kb on - strand, within MPMX19_03594at 1020.829 kb on - strand, within MPMX19_03594at 1021.347 kb on + strand, within MPMX19_03594at 1021.347 kb on + strand, within MPMX19_03594at 1021.347 kb on + strand, within MPMX19_03594at 1021.347 kb on + strand, within MPMX19_03594at 1021.348 kb on - strand, within MPMX19_03594at 1021.348 kb on - strand, within MPMX19_03594at 1021.556 kb on + strandat 1021.636 kb on + strandat 1021.636 kb on + strandat 1021.637 kb on - strandat 1021.637 kb on - strandat 1021.637 kb on - strandat 1021.703 kb on + strandat 1021.704 kb on - strandat 1021.704 kb on - strandat 1021.704 kb on - strandat 1021.704 kb on - strandat 1021.754 kb on + strandat 1021.755 kb on - strandat 1021.755 kb on - strandat 1021.755 kb on - strandat 1021.755 kb on - strandat 1022.219 kb on + strand, within MPMX19_03595at 1022.219 kb on + strand, within MPMX19_03595at 1022.219 kb on + strand, within MPMX19_03595at 1022.219 kb on + strand, within MPMX19_03595at 1022.219 kb on + strand, within MPMX19_03595at 1022.219 kb on + strand, within MPMX19_03595at 1022.219 kb on + strand, within MPMX19_03595at 1022.219 kb on + strand, within MPMX19_03595at 1022.220 kb on - strand, within MPMX19_03595at 1022.220 kb on - strand, within MPMX19_03595at 1022.220 kb on - strand, within MPMX19_03595at 1022.220 kb on - strand, within MPMX19_03595at 1022.220 kb on - strand, within MPMX19_03595at 1022.303 kb on + strand, within MPMX19_03595at 1022.303 kb on + strand, within MPMX19_03595at 1022.303 kb on + strand, within MPMX19_03595at 1022.304 kb on - strand, within MPMX19_03595at 1022.304 kb on - strand, within MPMX19_03595at 1022.327 kb on + strand, within MPMX19_03595at 1022.327 kb on + strand, within MPMX19_03595at 1022.327 kb on + strand, within MPMX19_03595at 1022.327 kb on + strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.328 kb on - strand, within MPMX19_03595at 1022.540 kb on + strand, within MPMX19_03595at 1022.541 kb on - strand, within MPMX19_03595at 1022.541 kb on - strand, within MPMX19_03595at 1022.570 kb on + strand, within MPMX19_03595at 1022.570 kb on + strand, within MPMX19_03595at 1022.570 kb on + strand, within MPMX19_03595at 1022.571 kb on - strand, within MPMX19_03595at 1022.571 kb on - strand, within MPMX19_03595at 1022.571 kb on - strand, within MPMX19_03595at 1022.606 kb on + strand, within MPMX19_03595at 1022.606 kb on + strand, within MPMX19_03595at 1022.606 kb on + strand, within MPMX19_03595at 1022.606 kb on + strand, within MPMX19_03595at 1022.607 kb on - strand, within MPMX19_03595at 1022.607 kb on - strand, within MPMX19_03595at 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.998 kb on + strandat 1022.999 kb on - strandat 1022.999 kb on - strandat 1022.999 kb on - strandat 1022.999 kb on - strandat 1022.999 kb on - strandat 1022.999 kb on - strandat 1023.200 kb on + strand, within MPMX19_03596at 1023.200 kb on + strand, within MPMX19_03596at 1023.200 kb on + strand, within MPMX19_03596at 1023.201 kb on - strand, within MPMX19_03596at 1023.201 kb on - strand, within MPMX19_03596at 1023.201 kb on - strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.233 kb on + strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.234 kb on - strand, within MPMX19_03596at 1023.239 kb on + strand, within MPMX19_03596at 1023.239 kb on + strand, within MPMX19_03596at 1023.240 kb on - strand, within MPMX19_03596at 1023.240 kb on - strand, within MPMX19_03596at 1023.240 kb on - strand, within MPMX19_03596at 1023.240 kb on - strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.365 kb on + strand, within MPMX19_03596at 1023.366 kb on - strand, within MPMX19_03596at 1023.366 kb on - strand, within MPMX19_03596at 1023.366 kb on - strand, within MPMX19_03596at 1023.366 kb on - strand, within MPMX19_03596at 1023.366 kb on - strand, within MPMX19_03596at 1023.447 kb on - strand, within MPMX19_03596at 1023.456 kb on - strand, within MPMX19_03596at 1023.456 kb on - strand, within MPMX19_03596at 1023.527 kb on + strand, within MPMX19_03596at 1023.528 kb on - strand, within MPMX19_03596at 1023.528 kb on - strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.530 kb on + strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.531 kb on - strand, within MPMX19_03596at 1023.752 kb on + strand, within MPMX19_03596at 1023.752 kb on + strand, within MPMX19_03596at 1023.752 kb on + strand, within MPMX19_03596at 1023.752 kb on + strand, within MPMX19_03596at 1023.752 kb on + strand, within MPMX19_03596at 1023.752 kb on + strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596at 1023.753 kb on - strand, within MPMX19_03596

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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1,020,714 + MPMX19_03594 0.43 -1.6
1,020,714 + MPMX19_03594 0.43 +0.1
1,020,714 + MPMX19_03594 0.43 -1.2
1,020,714 + MPMX19_03594 0.43 +0.3
1,020,714 + MPMX19_03594 0.43 -1.9
1,020,714 + MPMX19_03594 0.43 +1.1
1,020,714 + MPMX19_03594 0.43 -0.6
1,020,715 - MPMX19_03594 0.44 -0.2
1,020,715 - MPMX19_03594 0.44 -0.8
1,020,715 - MPMX19_03594 0.44 +0.2
1,020,715 - MPMX19_03594 0.44 +0.2
1,020,829 - MPMX19_03594 0.52 -0.9
1,020,829 - MPMX19_03594 0.52 +0.6
1,020,829 - MPMX19_03594 0.52 -0.5
1,020,829 - MPMX19_03594 0.52 -1.5
1,021,347 + MPMX19_03594 0.88 -2.1
1,021,347 + MPMX19_03594 0.88 -0.8
1,021,347 + MPMX19_03594 0.88 -1.6
1,021,347 + MPMX19_03594 0.88 -0.6
1,021,348 - MPMX19_03594 0.88 -1.4
1,021,348 - MPMX19_03594 0.88 +2.4
1,021,556 + -1.2
1,021,636 + +0.8
1,021,636 + +2.1
1,021,637 - -0.1
1,021,637 - +0.8
1,021,637 - -1.9
1,021,703 + +0.8
1,021,704 - -0.6
1,021,704 - +0.6
1,021,704 - -0.4
1,021,704 - +1.4
1,021,754 + -0.3
1,021,755 - +2.4
1,021,755 - -0.5
1,021,755 - -1.4
1,021,755 - -0.2
1,022,219 + MPMX19_03595 0.45 -1.4
1,022,219 + MPMX19_03595 0.45 +0.1
1,022,219 + MPMX19_03595 0.45 -0.4
1,022,219 + MPMX19_03595 0.45 -1.5
1,022,219 + MPMX19_03595 0.45 +0.7
1,022,219 + MPMX19_03595 0.45 -0.2
1,022,219 + MPMX19_03595 0.45 -1.2
1,022,219 + MPMX19_03595 0.45 +0.8
1,022,220 - MPMX19_03595 0.45 -0.1
1,022,220 - MPMX19_03595 0.45 -0.1
1,022,220 - MPMX19_03595 0.45 +0.8
1,022,220 - MPMX19_03595 0.45 -0.2
1,022,220 - MPMX19_03595 0.45 +0.8
1,022,303 + MPMX19_03595 0.51 +0.6
1,022,303 + MPMX19_03595 0.51 -0.4
1,022,303 + MPMX19_03595 0.51 -0.2
1,022,304 - MPMX19_03595 0.51 +0.8
1,022,304 - MPMX19_03595 0.51 +1.0
1,022,327 + MPMX19_03595 0.53 -0.0
1,022,327 + MPMX19_03595 0.53 +0.0
1,022,327 + MPMX19_03595 0.53 -0.2
1,022,327 + MPMX19_03595 0.53 -0.6
1,022,328 - MPMX19_03595 0.53 +0.0
1,022,328 - MPMX19_03595 0.53 +0.4
1,022,328 - MPMX19_03595 0.53 -1.8
1,022,328 - MPMX19_03595 0.53 +1.6
1,022,328 - MPMX19_03595 0.53 +0.6
1,022,328 - MPMX19_03595 0.53 -0.1
1,022,328 - MPMX19_03595 0.53 +0.7
1,022,328 - MPMX19_03595 0.53 +0.8
1,022,328 - MPMX19_03595 0.53 +1.4
1,022,328 - MPMX19_03595 0.53 -1.2
1,022,328 - MPMX19_03595 0.53 -1.4
1,022,328 - MPMX19_03595 0.53 +0.3
1,022,328 - MPMX19_03595 0.53 -0.6
1,022,540 + MPMX19_03595 0.70 -1.5
1,022,541 - MPMX19_03595 0.70 -0.6
1,022,541 - MPMX19_03595 0.70 +0.1
1,022,570 + MPMX19_03595 0.72 -0.7
1,022,570 + MPMX19_03595 0.72 -1.5
1,022,570 + MPMX19_03595 0.72 +0.5
1,022,571 - MPMX19_03595 0.72 +1.4
1,022,571 - MPMX19_03595 0.72 -0.7
1,022,571 - MPMX19_03595 0.72 +1.1
1,022,606 + MPMX19_03595 0.75 +0.1
1,022,606 + MPMX19_03595 0.75 -0.1
1,022,606 + MPMX19_03595 0.75 +0.1
1,022,606 + MPMX19_03595 0.75 -0.2
1,022,607 - MPMX19_03595 0.75 +0.4
1,022,607 - MPMX19_03595 0.75 -1.6
1,022,998 + -1.4
1,022,998 + -0.2
1,022,998 + -0.4
1,022,998 + +1.2
1,022,998 + +0.3
1,022,998 + -1.9
1,022,998 + +0.1
1,022,998 + +0.2
1,022,998 + +1.1
1,022,998 + -0.2
1,022,998 + +0.1
1,022,998 + -0.5
1,022,999 - -1.4
1,022,999 - +0.4
1,022,999 - -0.0
1,022,999 - -0.9
1,022,999 - -0.6
1,022,999 - -2.2
1,023,200 + MPMX19_03596 0.11 +0.6
1,023,200 + MPMX19_03596 0.11 +2.0
1,023,200 + MPMX19_03596 0.11 +0.2
1,023,201 - MPMX19_03596 0.11 -1.0
1,023,201 - MPMX19_03596 0.11 -0.8
1,023,201 - MPMX19_03596 0.11 -0.8
1,023,233 + MPMX19_03596 0.12 +0.6
1,023,233 + MPMX19_03596 0.12 -1.4
1,023,233 + MPMX19_03596 0.12 +1.4
1,023,233 + MPMX19_03596 0.12 -0.2
1,023,233 + MPMX19_03596 0.12 -0.2
1,023,233 + MPMX19_03596 0.12 -1.3
1,023,233 + MPMX19_03596 0.12 +1.4
1,023,233 + MPMX19_03596 0.12 -1.2
1,023,233 + MPMX19_03596 0.12 -0.3
1,023,233 + MPMX19_03596 0.12 -1.0
1,023,233 + MPMX19_03596 0.12 +0.8
1,023,234 - MPMX19_03596 0.12 -1.8
1,023,234 - MPMX19_03596 0.12 +0.1
1,023,234 - MPMX19_03596 0.12 +0.2
1,023,234 - MPMX19_03596 0.12 +0.2
1,023,234 - MPMX19_03596 0.12 +0.4
1,023,234 - MPMX19_03596 0.12 -0.4
1,023,234 - MPMX19_03596 0.12 -1.3
1,023,234 - MPMX19_03596 0.12 -0.9
1,023,234 - MPMX19_03596 0.12 +1.1
1,023,234 - MPMX19_03596 0.12 +2.1
1,023,234 - MPMX19_03596 0.12 -1.0
1,023,234 - MPMX19_03596 0.12 -0.4
1,023,234 - MPMX19_03596 0.12 -0.8
1,023,234 - MPMX19_03596 0.12 -0.2
1,023,234 - MPMX19_03596 0.12 -1.5
1,023,234 - MPMX19_03596 0.12 -0.8
1,023,234 - MPMX19_03596 0.12 -1.1
1,023,234 - MPMX19_03596 0.12 -2.6
1,023,239 + MPMX19_03596 0.13 -0.2
1,023,239 + MPMX19_03596 0.13 +0.2
1,023,240 - MPMX19_03596 0.13 +0.7
1,023,240 - MPMX19_03596 0.13 -1.5
1,023,240 - MPMX19_03596 0.13 +1.1
1,023,240 - MPMX19_03596 0.13 -0.0
1,023,365 + MPMX19_03596 0.19 -0.6
1,023,365 + MPMX19_03596 0.19 +1.8
1,023,365 + MPMX19_03596 0.19 +0.8
1,023,365 + MPMX19_03596 0.19 -0.2
1,023,365 + MPMX19_03596 0.19 -0.9
1,023,365 + MPMX19_03596 0.19 -0.6
1,023,365 + MPMX19_03596 0.19 +1.4
1,023,365 + MPMX19_03596 0.19 -0.6
1,023,365 + MPMX19_03596 0.19 +0.1
1,023,365 + MPMX19_03596 0.19 -0.0
1,023,365 + MPMX19_03596 0.19 +1.4
1,023,365 + MPMX19_03596 0.19 +0.8
1,023,365 + MPMX19_03596 0.19 +0.4
1,023,366 - MPMX19_03596 0.19 -0.5
1,023,366 - MPMX19_03596 0.19 -0.5
1,023,366 - MPMX19_03596 0.19 +0.1
1,023,366 - MPMX19_03596 0.19 -0.5
1,023,366 - MPMX19_03596 0.19 -0.6
1,023,447 - MPMX19_03596 0.24 -0.8
1,023,456 - MPMX19_03596 0.24 +0.6
1,023,456 - MPMX19_03596 0.24 +0.6
1,023,527 + MPMX19_03596 0.28 -1.2
1,023,528 - MPMX19_03596 0.28 -1.6
1,023,528 - MPMX19_03596 0.28 -0.7
1,023,530 + MPMX19_03596 0.28 +0.0
1,023,530 + MPMX19_03596 0.28 -1.2
1,023,530 + MPMX19_03596 0.28 +1.1
1,023,530 + MPMX19_03596 0.28 -1.0
1,023,530 + MPMX19_03596 0.28 -0.3
1,023,530 + MPMX19_03596 0.28 +0.4
1,023,530 + MPMX19_03596 0.28 -0.4
1,023,530 + MPMX19_03596 0.28 -1.5
1,023,530 + MPMX19_03596 0.28 +0.4
1,023,530 + MPMX19_03596 0.28 -1.2
1,023,530 + MPMX19_03596 0.28 -0.9
1,023,530 + MPMX19_03596 0.28 -0.3
1,023,530 + MPMX19_03596 0.28 +2.4
1,023,531 - MPMX19_03596 0.28 +1.0
1,023,531 - MPMX19_03596 0.28 -0.4
1,023,531 - MPMX19_03596 0.28 -0.8
1,023,531 - MPMX19_03596 0.28 -1.1
1,023,531 - MPMX19_03596 0.28 -1.2
1,023,531 - MPMX19_03596 0.28 -1.3
1,023,531 - MPMX19_03596 0.28 -0.3
1,023,531 - MPMX19_03596 0.28 -0.3
1,023,531 - MPMX19_03596 0.28 -0.9
1,023,531 - MPMX19_03596 0.28 +0.3
1,023,752 + MPMX19_03596 0.40 -0.8
1,023,752 + MPMX19_03596 0.40 +0.7
1,023,752 + MPMX19_03596 0.40 -0.7
1,023,752 + MPMX19_03596 0.40 -0.8
1,023,752 + MPMX19_03596 0.40 +0.0
1,023,752 + MPMX19_03596 0.40 +0.1
1,023,753 - MPMX19_03596 0.40 -0.8
1,023,753 - MPMX19_03596 0.40 +0.2
1,023,753 - MPMX19_03596 0.40 -0.2
1,023,753 - MPMX19_03596 0.40 +0.4
1,023,753 - MPMX19_03596 0.40 -2.0
1,023,753 - MPMX19_03596 0.40 +1.4
1,023,753 - MPMX19_03596 0.40 +0.8
1,023,753 - MPMX19_03596 0.40 -0.2
1,023,753 - MPMX19_03596 0.40 -0.9
1,023,753 - MPMX19_03596 0.40 -1.4
1,023,753 - MPMX19_03596 0.40 -0.3
1,023,753 - MPMX19_03596 0.40 -1.9

Or see this region's nucleotide sequence