Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03344

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_03342 and MPMX19_03343 overlap by 4 nucleotidesMPMX19_03343 and MPMX19_03344 are separated by 49 nucleotidesMPMX19_03344 and MPMX19_03345 are separated by 123 nucleotides MPMX19_03342: MPMX19_03342 - hypothetical protein, at 700,269 to 700,505 _03342 MPMX19_03343: MPMX19_03343 - hypothetical protein, at 700,502 to 701,356 _03343 MPMX19_03344: MPMX19_03344 - 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase, at 701,406 to 703,115 _03344 MPMX19_03345: MPMX19_03345 - Phenylacetaldehyde dehydrogenase, at 703,239 to 704,654 _03345 Position (kb) 701 702 703 704Strain fitness (log2 ratio) -2 -1 0 1 2 3at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.775 kb on + strand, within MPMX19_03343at 700.776 kb on - strand, within MPMX19_03343at 700.776 kb on - strand, within MPMX19_03343at 700.776 kb on - strand, within MPMX19_03343at 700.776 kb on - strand, within MPMX19_03343at 700.776 kb on - strand, within MPMX19_03343at 700.776 kb on - strand, within MPMX19_03343at 700.777 kb on + strand, within MPMX19_03343at 700.777 kb on + strand, within MPMX19_03343at 700.777 kb on + strand, within MPMX19_03343at 700.777 kb on + strand, within MPMX19_03343at 700.777 kb on + strand, within MPMX19_03343at 700.777 kb on + strand, within MPMX19_03343at 700.777 kb on + strand, within MPMX19_03343at 700.778 kb on - strand, within MPMX19_03343at 700.778 kb on - strand, within MPMX19_03343at 700.778 kb on - strand, within MPMX19_03343at 701.053 kb on + strand, within MPMX19_03343at 701.053 kb on + strand, within MPMX19_03343at 701.053 kb on + strand, within MPMX19_03343at 701.053 kb on + strand, within MPMX19_03343at 701.053 kb on + strand, within MPMX19_03343at 701.053 kb on + strand, within MPMX19_03343at 701.053 kb on + strand, within MPMX19_03343at 701.053 kb on + strand, within MPMX19_03343at 701.054 kb on - strand, within MPMX19_03343at 701.054 kb on - strand, within MPMX19_03343at 701.054 kb on - strand, within MPMX19_03343at 701.054 kb on - strand, within MPMX19_03343at 701.054 kb on - strand, within MPMX19_03343at 701.309 kb on + strandat 701.309 kb on + strandat 701.309 kb on + strandat 701.309 kb on + strandat 701.309 kb on + strandat 701.309 kb on + strandat 701.310 kb on - strandat 701.310 kb on - strandat 701.310 kb on - strandat 701.310 kb on - strandat 701.310 kb on - strandat 701.310 kb on - strandat 701.310 kb on - strandat 701.310 kb on - strandat 701.352 kb on + strandat 701.352 kb on + strandat 701.352 kb on + strandat 701.352 kb on + strandat 701.353 kb on - strandat 701.353 kb on - strandat 701.518 kb on + strandat 701.519 kb on - strandat 701.519 kb on - strandat 701.519 kb on - strandat 701.519 kb on - strandat 701.519 kb on - strandat 701.519 kb on - strandat 701.519 kb on - strandat 701.533 kb on + strandat 701.533 kb on + strandat 701.533 kb on + strandat 701.534 kb on - strandat 701.534 kb on - strandat 701.534 kb on - strandat 701.534 kb on - strandat 701.629 kb on + strand, within MPMX19_03344at 701.629 kb on + strand, within MPMX19_03344at 701.630 kb on - strand, within MPMX19_03344at 701.683 kb on + strand, within MPMX19_03344at 701.683 kb on + strand, within MPMX19_03344at 701.683 kb on + strand, within MPMX19_03344at 701.683 kb on - strand, within MPMX19_03344at 701.684 kb on - strand, within MPMX19_03344at 701.684 kb on - strand, within MPMX19_03344at 701.684 kb on - strand, within MPMX19_03344at 701.684 kb on - strand, within MPMX19_03344at 701.684 kb on - strand, within MPMX19_03344at 701.684 kb on - strand, within MPMX19_03344at 701.684 kb on - strand, within MPMX19_03344at 701.710 kb on + strand, within MPMX19_03344at 701.710 kb on + strand, within MPMX19_03344at 701.710 kb on + strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.711 kb on - strand, within MPMX19_03344at 701.767 kb on + strand, within MPMX19_03344at 701.767 kb on + strand, within MPMX19_03344at 701.768 kb on - strand, within MPMX19_03344at 701.768 kb on - strand, within MPMX19_03344at 701.768 kb on - strand, within MPMX19_03344at 701.857 kb on + strand, within MPMX19_03344at 701.858 kb on - strand, within MPMX19_03344at 701.875 kb on + strand, within MPMX19_03344at 701.876 kb on - strand, within MPMX19_03344at 702.155 kb on - strand, within MPMX19_03344at 702.155 kb on - strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.340 kb on + strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.341 kb on - strand, within MPMX19_03344at 702.703 kb on + strand, within MPMX19_03344at 702.703 kb on + strand, within MPMX19_03344at 702.703 kb on + strand, within MPMX19_03344at 702.703 kb on + strand, within MPMX19_03344at 702.703 kb on + strand, within MPMX19_03344at 702.703 kb on + strand, within MPMX19_03344at 702.704 kb on - strand, within MPMX19_03344at 702.704 kb on - strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.766 kb on + strand, within MPMX19_03344at 702.767 kb on - strand, within MPMX19_03344at 702.767 kb on - strand, within MPMX19_03344at 702.767 kb on - strand, within MPMX19_03344at 702.955 kb on + strandat 702.956 kb on - strandat 702.956 kb on - strandat 702.956 kb on - strandat 702.956 kb on - strandat 702.956 kb on - strandat 702.956 kb on - strandat 702.956 kb on - strandat 702.956 kb on - strandat 702.956 kb on - strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.081 kb on + strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.082 kb on - strandat 703.110 kb on - strandat 703.110 kb on - strandat 703.141 kb on + strandat 703.141 kb on + strandat 703.142 kb on - strandat 703.142 kb on - strandat 703.142 kb on - strandat 703.142 kb on - strandat 703.197 kb on + strandat 703.240 kb on + strandat 703.240 kb on + strandat 703.420 kb on + strand, within MPMX19_03345at 703.421 kb on - strand, within MPMX19_03345at 703.465 kb on + strand, within MPMX19_03345at 703.465 kb on + strand, within MPMX19_03345at 703.687 kb on + strand, within MPMX19_03345at 703.687 kb on + strand, within MPMX19_03345at 703.688 kb on - strand, within MPMX19_03345at 703.688 kb on - strand, within MPMX19_03345at 703.688 kb on - strand, within MPMX19_03345at 703.688 kb on - strand, within MPMX19_03345at 703.688 kb on - strand, within MPMX19_03345at 703.792 kb on + strand, within MPMX19_03345at 703.792 kb on + strand, within MPMX19_03345at 703.792 kb on + strand, within MPMX19_03345at 703.793 kb on - strand, within MPMX19_03345at 703.793 kb on - strand, within MPMX19_03345at 703.793 kb on - strand, within MPMX19_03345at 703.810 kb on + strand, within MPMX19_03345at 703.811 kb on - strand, within MPMX19_03345at 703.811 kb on - strand, within MPMX19_03345at 703.811 kb on - strand, within MPMX19_03345at 703.811 kb on - strand, within MPMX19_03345at 703.811 kb on - strand, within MPMX19_03345

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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700,775 + MPMX19_03343 0.32 -0.2
700,775 + MPMX19_03343 0.32 -2.3
700,775 + MPMX19_03343 0.32 -0.0
700,775 + MPMX19_03343 0.32 -1.3
700,775 + MPMX19_03343 0.32 -1.4
700,775 + MPMX19_03343 0.32 -0.5
700,775 + MPMX19_03343 0.32 -1.8
700,775 + MPMX19_03343 0.32 -1.0
700,775 + MPMX19_03343 0.32 -2.1
700,775 + MPMX19_03343 0.32 -1.8
700,775 + MPMX19_03343 0.32 -0.6
700,776 - MPMX19_03343 0.32 -1.5
700,776 - MPMX19_03343 0.32 +1.8
700,776 - MPMX19_03343 0.32 -0.3
700,776 - MPMX19_03343 0.32 +0.8
700,776 - MPMX19_03343 0.32 +0.6
700,776 - MPMX19_03343 0.32 +0.2
700,777 + MPMX19_03343 0.32 -0.8
700,777 + MPMX19_03343 0.32 -1.8
700,777 + MPMX19_03343 0.32 +0.4
700,777 + MPMX19_03343 0.32 -0.4
700,777 + MPMX19_03343 0.32 +0.4
700,777 + MPMX19_03343 0.32 -1.3
700,777 + MPMX19_03343 0.32 -1.7
700,778 - MPMX19_03343 0.32 -2.1
700,778 - MPMX19_03343 0.32 -0.6
700,778 - MPMX19_03343 0.32 -1.3
701,053 + MPMX19_03343 0.64 -0.6
701,053 + MPMX19_03343 0.64 -0.1
701,053 + MPMX19_03343 0.64 -0.3
701,053 + MPMX19_03343 0.64 +0.3
701,053 + MPMX19_03343 0.64 -1.4
701,053 + MPMX19_03343 0.64 -0.6
701,053 + MPMX19_03343 0.64 +0.4
701,053 + MPMX19_03343 0.64 +0.8
701,054 - MPMX19_03343 0.65 -2.7
701,054 - MPMX19_03343 0.65 -0.7
701,054 - MPMX19_03343 0.65 -1.8
701,054 - MPMX19_03343 0.65 +1.1
701,054 - MPMX19_03343 0.65 -1.6
701,309 + -0.0
701,309 + -0.1
701,309 + -1.5
701,309 + +0.4
701,309 + -1.4
701,309 + -0.9
701,310 - -0.2
701,310 - -0.7
701,310 - -1.4
701,310 - -1.6
701,310 - +1.4
701,310 - +0.6
701,310 - -1.2
701,310 - -1.2
701,352 + -1.3
701,352 + -0.3
701,352 + +1.4
701,352 + +0.3
701,353 - +0.4
701,353 - -0.4
701,518 + +1.4
701,519 - -0.8
701,519 - +2.4
701,519 - -1.0
701,519 - +0.8
701,519 - -1.2
701,519 - -0.2
701,519 - -0.2
701,533 + -2.0
701,533 + -0.4
701,533 + -0.6
701,534 - +0.1
701,534 - +0.4
701,534 - +1.3
701,534 - -1.0
701,629 + MPMX19_03344 0.13 -0.1
701,629 + MPMX19_03344 0.13 -0.5
701,630 - MPMX19_03344 0.13 -0.9
701,683 + MPMX19_03344 0.16 -1.2
701,683 + MPMX19_03344 0.16 -2.1
701,683 + MPMX19_03344 0.16 +0.1
701,683 - MPMX19_03344 0.16 +0.1
701,684 - MPMX19_03344 0.16 +2.1
701,684 - MPMX19_03344 0.16 -0.6
701,684 - MPMX19_03344 0.16 +1.0
701,684 - MPMX19_03344 0.16 -0.8
701,684 - MPMX19_03344 0.16 +0.2
701,684 - MPMX19_03344 0.16 +0.1
701,684 - MPMX19_03344 0.16 -0.0
701,710 + MPMX19_03344 0.18 -0.4
701,710 + MPMX19_03344 0.18 -0.6
701,710 + MPMX19_03344 0.18 -0.1
701,711 - MPMX19_03344 0.18 -0.3
701,711 - MPMX19_03344 0.18 -0.8
701,711 - MPMX19_03344 0.18 +0.3
701,711 - MPMX19_03344 0.18 +0.5
701,711 - MPMX19_03344 0.18 -0.1
701,711 - MPMX19_03344 0.18 -0.8
701,711 - MPMX19_03344 0.18 +1.7
701,711 - MPMX19_03344 0.18 -0.4
701,711 - MPMX19_03344 0.18 +0.3
701,767 + MPMX19_03344 0.21 -0.9
701,767 + MPMX19_03344 0.21 -0.0
701,768 - MPMX19_03344 0.21 -0.2
701,768 - MPMX19_03344 0.21 -0.4
701,768 - MPMX19_03344 0.21 -0.8
701,857 + MPMX19_03344 0.26 +1.5
701,858 - MPMX19_03344 0.26 +0.6
701,875 + MPMX19_03344 0.27 -0.3
701,876 - MPMX19_03344 0.27 -0.3
702,155 - MPMX19_03344 0.44 -0.2
702,155 - MPMX19_03344 0.44 -1.9
702,340 + MPMX19_03344 0.55 -1.5
702,340 + MPMX19_03344 0.55 -0.2
702,340 + MPMX19_03344 0.55 -0.2
702,340 + MPMX19_03344 0.55 +0.4
702,340 + MPMX19_03344 0.55 -0.4
702,340 + MPMX19_03344 0.55 -0.3
702,340 + MPMX19_03344 0.55 -0.7
702,340 + MPMX19_03344 0.55 -0.2
702,340 + MPMX19_03344 0.55 -0.8
702,340 + MPMX19_03344 0.55 +0.4
702,340 + MPMX19_03344 0.55 -1.4
702,341 - MPMX19_03344 0.55 +0.6
702,341 - MPMX19_03344 0.55 +0.2
702,341 - MPMX19_03344 0.55 +0.5
702,341 - MPMX19_03344 0.55 -1.4
702,341 - MPMX19_03344 0.55 +0.6
702,341 - MPMX19_03344 0.55 -1.7
702,341 - MPMX19_03344 0.55 +0.1
702,341 - MPMX19_03344 0.55 +1.2
702,341 - MPMX19_03344 0.55 -2.0
702,341 - MPMX19_03344 0.55 +0.1
702,341 - MPMX19_03344 0.55 -1.8
702,341 - MPMX19_03344 0.55 +0.7
702,341 - MPMX19_03344 0.55 -0.7
702,341 - MPMX19_03344 0.55 -1.8
702,703 + MPMX19_03344 0.76 -1.4
702,703 + MPMX19_03344 0.76 -0.3
702,703 + MPMX19_03344 0.76 -0.2
702,703 + MPMX19_03344 0.76 +0.4
702,703 + MPMX19_03344 0.76 -2.0
702,703 + MPMX19_03344 0.76 -0.1
702,704 - MPMX19_03344 0.76 -0.2
702,704 - MPMX19_03344 0.76 -0.5
702,766 + MPMX19_03344 0.80 -1.1
702,766 + MPMX19_03344 0.80 -0.6
702,766 + MPMX19_03344 0.80 -0.4
702,766 + MPMX19_03344 0.80 +0.4
702,766 + MPMX19_03344 0.80 -1.3
702,766 + MPMX19_03344 0.80 +0.7
702,766 + MPMX19_03344 0.80 -1.1
702,766 + MPMX19_03344 0.80 -2.3
702,766 + MPMX19_03344 0.80 +0.6
702,767 - MPMX19_03344 0.80 -1.5
702,767 - MPMX19_03344 0.80 +0.4
702,767 - MPMX19_03344 0.80 -0.6
702,955 + +0.1
702,956 - -0.2
702,956 - +0.8
702,956 - -0.5
702,956 - -1.2
702,956 - +0.9
702,956 - -0.2
702,956 - -1.9
702,956 - -1.0
702,956 - -2.0
703,081 + +0.3
703,081 + +0.1
703,081 + -1.7
703,081 + -0.4
703,081 + -1.3
703,081 + -0.8
703,081 + +0.1
703,081 + -0.3
703,081 + -0.1
703,081 + +0.4
703,081 + -0.2
703,081 + -0.6
703,081 + +1.1
703,081 + -0.0
703,081 + +0.5
703,081 + -0.8
703,081 + -0.2
703,081 + -1.0
703,082 - -1.7
703,082 - -0.8
703,082 - -0.5
703,082 - -1.0
703,082 - -1.3
703,082 - -1.2
703,082 - +0.3
703,082 - +0.7
703,082 - -1.8
703,082 - -1.5
703,082 - -0.2
703,082 - -1.0
703,082 - -2.0
703,082 - -2.2
703,110 - +3.0
703,110 - -0.4
703,141 + +0.4
703,141 + +0.4
703,142 - +0.8
703,142 - +0.6
703,142 - -0.8
703,142 - +1.1
703,197 + +0.1
703,240 + -0.6
703,240 + -0.6
703,420 + MPMX19_03345 0.13 -2.1
703,421 - MPMX19_03345 0.13 -1.1
703,465 + MPMX19_03345 0.16 +0.8
703,465 + MPMX19_03345 0.16 -1.6
703,687 + MPMX19_03345 0.32 -0.2
703,687 + MPMX19_03345 0.32 +0.2
703,688 - MPMX19_03345 0.32 -1.3
703,688 - MPMX19_03345 0.32 -1.2
703,688 - MPMX19_03345 0.32 +0.5
703,688 - MPMX19_03345 0.32 -2.5
703,688 - MPMX19_03345 0.32 -1.3
703,792 + MPMX19_03345 0.39 -1.4
703,792 + MPMX19_03345 0.39 -0.6
703,792 + MPMX19_03345 0.39 -2.1
703,793 - MPMX19_03345 0.39 -0.9
703,793 - MPMX19_03345 0.39 -0.2
703,793 - MPMX19_03345 0.39 -0.1
703,810 + MPMX19_03345 0.40 -0.1
703,811 - MPMX19_03345 0.40 +0.2
703,811 - MPMX19_03345 0.40 -0.8
703,811 - MPMX19_03345 0.40 -0.2
703,811 - MPMX19_03345 0.40 -0.5
703,811 - MPMX19_03345 0.40 -0.6

Or see this region's nucleotide sequence