Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03201 and MPMX19_03202 are separated by 432 nucleotides MPMX19_03202 and MPMX19_03203 are separated by 50 nucleotides
MPMX19_03201: MPMX19_03201 - Sensor histidine kinase RcsC, at 495,440 to 500,074
_03201
MPMX19_03202: MPMX19_03202 - IS256 family transposase ISAli6, at 500,507 to 500,824
_03202
MPMX19_03203: MPMX19_03203 - hypothetical protein, at 500,875 to 501,909
_03203
Position (kb) 500
501 Strain fitness (log2 ratio) -2
-1
0
1
2 at 499.763 kb on + strand at 499.763 kb on + strand at 499.763 kb on + strand at 499.763 kb on + strand at 499.763 kb on + strand at 499.763 kb on + strand at 499.763 kb on + strand at 499.764 kb on - strand at 499.764 kb on - strand at 499.764 kb on - strand at 499.764 kb on - strand at 499.764 kb on - strand at 499.764 kb on - strand at 500.028 kb on + strand at 500.028 kb on + strand at 500.028 kb on + strand at 500.028 kb on + strand at 500.029 kb on - strand at 500.029 kb on - strand at 500.029 kb on - strand at 500.029 kb on - strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.123 kb on + strand at 500.124 kb on - strand at 500.124 kb on - strand at 500.170 kb on - strand at 500.256 kb on + strand at 500.277 kb on + strand at 500.287 kb on + strand at 500.296 kb on + strand at 500.296 kb on + strand at 500.296 kb on + strand at 500.296 kb on + strand at 500.297 kb on - strand at 500.297 kb on - strand at 500.297 kb on - strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.298 kb on + strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.299 kb on - strand at 500.306 kb on + strand at 500.306 kb on + strand at 500.306 kb on + strand at 500.307 kb on - strand at 500.307 kb on - strand at 500.368 kb on + strand at 500.368 kb on + strand at 500.368 kb on + strand at 500.368 kb on + strand at 500.368 kb on + strand at 500.368 kb on + strand at 500.368 kb on + strand at 500.368 kb on + strand at 500.368 kb on + strand at 500.369 kb on - strand at 500.369 kb on - strand at 500.369 kb on - strand at 500.413 kb on - strand at 500.413 kb on - strand at 500.417 kb on + strand at 500.418 kb on - strand at 500.418 kb on - strand at 500.462 kb on + strand at 500.463 kb on - strand at 500.754 kb on - strand, within MPMX19_03202 at 500.754 kb on - strand, within MPMX19_03202 at 500.822 kb on + strand at 500.823 kb on - strand at 500.823 kb on - strand at 500.823 kb on - strand at 500.974 kb on + strand at 500.975 kb on - strand at 500.995 kb on + strand, within MPMX19_03203 at 500.995 kb on + strand, within MPMX19_03203 at 500.995 kb on + strand, within MPMX19_03203 at 500.995 kb on + strand, within MPMX19_03203 at 500.995 kb on + strand, within MPMX19_03203 at 500.995 kb on + strand, within MPMX19_03203 at 500.995 kb on + strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 500.996 kb on - strand, within MPMX19_03203 at 501.168 kb on + strand, within MPMX19_03203 at 501.169 kb on - strand, within MPMX19_03203 at 501.169 kb on - strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.448 kb on + strand, within MPMX19_03203 at 501.546 kb on + strand, within MPMX19_03203 at 501.548 kb on + strand, within MPMX19_03203 at 501.548 kb on + strand, within MPMX19_03203 at 501.549 kb on - strand, within MPMX19_03203 at 501.549 kb on - strand, within MPMX19_03203 at 501.570 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.634 kb on + strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.635 kb on - strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.636 kb on + strand, within MPMX19_03203 at 501.637 kb on - strand, within MPMX19_03203 at 501.637 kb on - strand, within MPMX19_03203 at 501.637 kb on - strand, within MPMX19_03203 at 501.647 kb on + strand, within MPMX19_03203 at 501.648 kb on - strand, within MPMX19_03203
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 499,763 + +0.4 499,763 + +0.6 499,763 + -0.6 499,763 + -0.9 499,763 + -1.8 499,763 + +0.3 499,763 + +1.0 499,764 - -0.4 499,764 - -1.1 499,764 - -0.6 499,764 - -0.3 499,764 - +0.6 499,764 - -1.3 500,028 + +0.4 500,028 + -2.3 500,028 + -0.1 500,028 + -1.0 500,029 - +0.4 500,029 - -1.8 500,029 - -1.7 500,029 - -0.4 500,123 + -1.0 500,123 + -0.3 500,123 + -0.5 500,123 + -0.8 500,123 + -0.7 500,123 + -2.1 500,123 + +0.6 500,123 + +0.9 500,123 + -0.3 500,123 + -0.4 500,123 + -0.4 500,123 + -0.8 500,123 + -1.7 500,123 + -0.6 500,124 - +0.7 500,124 - -1.0 500,170 - -1.3 500,256 + +0.6 500,277 + -2.5 500,287 + +1.4 500,296 + -0.7 500,296 + +0.4 500,296 + -0.5 500,296 + +0.0 500,297 - -1.7 500,297 - -1.2 500,297 - +1.4 500,298 + +0.2 500,298 + -1.9 500,298 + +0.6 500,298 + -0.4 500,298 + -1.6 500,298 + -2.7 500,298 + -1.0 500,298 + -1.4 500,298 + -2.0 500,298 + -2.0 500,299 - +0.4 500,299 - +0.4 500,299 - -1.2 500,299 - -0.4 500,299 - -0.0 500,299 - -1.0 500,299 - -1.2 500,299 - -0.1 500,299 - -1.0 500,299 - +0.9 500,299 - -0.4 500,306 + -0.6 500,306 + -0.6 500,306 + -0.6 500,307 - -0.6 500,307 - -1.1 500,368 + -1.1 500,368 + -1.2 500,368 + -0.7 500,368 + -0.1 500,368 + -1.1 500,368 + -2.0 500,368 + -1.4 500,368 + -0.6 500,368 + -0.8 500,369 - +0.7 500,369 - +1.4 500,369 - -1.6 500,413 - -0.0 500,413 - -0.6 500,417 + -1.4 500,418 - -0.5 500,418 - -0.9 500,462 + +1.2 500,463 - -0.5 500,754 - MPMX19_03202 0.78 -0.2 500,754 - MPMX19_03202 0.78 +0.3 500,822 + -0.5 500,823 - -0.4 500,823 - -1.1 500,823 - -0.6 500,974 + -1.7 500,975 - -0.7 500,995 + MPMX19_03203 0.12 -0.9 500,995 + MPMX19_03203 0.12 -1.1 500,995 + MPMX19_03203 0.12 -1.4 500,995 + MPMX19_03203 0.12 +0.5 500,995 + MPMX19_03203 0.12 -1.3 500,995 + MPMX19_03203 0.12 +0.1 500,995 + MPMX19_03203 0.12 -1.2 500,996 - MPMX19_03203 0.12 -0.0 500,996 - MPMX19_03203 0.12 -1.1 500,996 - MPMX19_03203 0.12 +1.9 500,996 - MPMX19_03203 0.12 -2.0 500,996 - MPMX19_03203 0.12 +0.2 500,996 - MPMX19_03203 0.12 +1.0 500,996 - MPMX19_03203 0.12 -0.6 500,996 - MPMX19_03203 0.12 +0.9 500,996 - MPMX19_03203 0.12 -0.6 500,996 - MPMX19_03203 0.12 -1.1 500,996 - MPMX19_03203 0.12 -0.7 500,996 - MPMX19_03203 0.12 +0.9 501,168 + MPMX19_03203 0.28 -1.8 501,169 - MPMX19_03203 0.28 +0.2 501,169 - MPMX19_03203 0.28 +0.1 501,448 + MPMX19_03203 0.55 -0.0 501,448 + MPMX19_03203 0.55 -1.1 501,448 + MPMX19_03203 0.55 -0.7 501,448 + MPMX19_03203 0.55 -0.1 501,448 + MPMX19_03203 0.55 -1.7 501,546 + MPMX19_03203 0.65 -0.1 501,548 + MPMX19_03203 0.65 +1.2 501,548 + MPMX19_03203 0.65 -0.1 501,549 - MPMX19_03203 0.65 +0.1 501,549 - MPMX19_03203 0.65 -1.7 501,570 + MPMX19_03203 0.67 -1.7 501,634 + MPMX19_03203 0.73 -1.3 501,634 + MPMX19_03203 0.73 +0.2 501,634 + MPMX19_03203 0.73 +0.7 501,634 + MPMX19_03203 0.73 +1.1 501,634 + MPMX19_03203 0.73 -1.9 501,634 + MPMX19_03203 0.73 -2.5 501,634 + MPMX19_03203 0.73 -0.1 501,634 + MPMX19_03203 0.73 -1.9 501,634 + MPMX19_03203 0.73 +0.5 501,635 - MPMX19_03203 0.73 +0.2 501,635 - MPMX19_03203 0.73 -2.2 501,635 - MPMX19_03203 0.73 -0.6 501,635 - MPMX19_03203 0.73 -0.2 501,635 - MPMX19_03203 0.73 -1.5 501,636 + MPMX19_03203 0.74 -1.0 501,636 + MPMX19_03203 0.74 -1.4 501,636 + MPMX19_03203 0.74 -0.6 501,636 + MPMX19_03203 0.74 -1.7 501,636 + MPMX19_03203 0.74 -0.6 501,637 - MPMX19_03203 0.74 -0.0 501,637 - MPMX19_03203 0.74 -0.1 501,637 - MPMX19_03203 0.74 -1.1 501,647 + MPMX19_03203 0.75 -2.5 501,648 - MPMX19_03203 0.75 -1.0
Or see this region's nucleotide sequence