Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02639

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02637 and MPMX19_02638 are separated by 178 nucleotidesMPMX19_02638 and MPMX19_02639 are separated by 118 nucleotidesMPMX19_02639 and MPMX19_02640 are separated by 51 nucleotides MPMX19_02637: MPMX19_02637 - Inosine-5'-monophosphate dehydrogenase, at 2,755,038 to 2,755,499 _02637 MPMX19_02638: MPMX19_02638 - IS1595 family transposase ISMpo2, at 2,755,678 to 2,756,169 _02638 MPMX19_02639: MPMX19_02639 - 3-dehydroquinate synthase, at 2,756,288 to 2,757,433 _02639 MPMX19_02640: MPMX19_02640 - Shikimate kinase, at 2,757,485 to 2,758,309 _02640 Position (kb) 2756 2757 2758Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2755.573 kb on + strandat 2755.573 kb on + strandat 2755.573 kb on + strandat 2755.574 kb on - strandat 2755.574 kb on - strandat 2755.574 kb on - strandat 2755.574 kb on - strandat 2755.574 kb on - strandat 2755.574 kb on - strandat 2755.574 kb on - strandat 2755.609 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.727 kb on + strandat 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.728 kb on - strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.847 kb on + strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.848 kb on - strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.883 kb on + strand, within MPMX19_02638at 2755.884 kb on - strand, within MPMX19_02638at 2755.884 kb on - strand, within MPMX19_02638at 2755.884 kb on - strand, within MPMX19_02638at 2755.884 kb on - strand, within MPMX19_02638at 2755.884 kb on - strand, within MPMX19_02638at 2756.128 kb on + strandat 2756.128 kb on + strandat 2756.128 kb on + strandat 2756.128 kb on + strandat 2756.129 kb on - strandat 2756.129 kb on - strandat 2756.129 kb on - strandat 2756.129 kb on - strandat 2756.129 kb on - strandat 2756.129 kb on - strandat 2756.129 kb on - strandat 2756.129 kb on - strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.224 kb on + strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2756.225 kb on - strandat 2758.310 kb on - strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.427 kb on + strandat 2758.428 kb on - strandat 2758.428 kb on - strandat 2758.428 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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2,755,573 + +0.5
2,755,573 + +2.0
2,755,573 + -0.7
2,755,574 - -0.2
2,755,574 - -0.4
2,755,574 - -0.4
2,755,574 - -0.2
2,755,574 - +0.7
2,755,574 - +0.8
2,755,574 - -0.2
2,755,609 + +0.5
2,755,727 + +0.7
2,755,727 + +0.1
2,755,727 + -2.6
2,755,727 + +0.0
2,755,727 + -0.8
2,755,727 + -2.8
2,755,727 + -0.6
2,755,727 + -1.6
2,755,727 + -0.7
2,755,727 + -0.7
2,755,727 + -0.5
2,755,727 + +0.8
2,755,727 + -0.2
2,755,727 + -2.2
2,755,727 + -0.6
2,755,727 + +0.6
2,755,727 + -0.9
2,755,727 + -0.9
2,755,727 + -1.0
2,755,727 + -1.0
2,755,728 - MPMX19_02638 0.10 -1.0
2,755,728 - MPMX19_02638 0.10 -1.2
2,755,728 - MPMX19_02638 0.10 +0.5
2,755,728 - MPMX19_02638 0.10 -0.8
2,755,728 - MPMX19_02638 0.10 -0.7
2,755,728 - MPMX19_02638 0.10 -1.0
2,755,728 - MPMX19_02638 0.10 -0.1
2,755,728 - MPMX19_02638 0.10 -0.6
2,755,728 - MPMX19_02638 0.10 -1.5
2,755,728 - MPMX19_02638 0.10 -1.2
2,755,728 - MPMX19_02638 0.10 -1.2
2,755,728 - MPMX19_02638 0.10 -0.3
2,755,728 - MPMX19_02638 0.10 +0.8
2,755,728 - MPMX19_02638 0.10 -1.0
2,755,728 - MPMX19_02638 0.10 +0.2
2,755,728 - MPMX19_02638 0.10 -1.2
2,755,728 - MPMX19_02638 0.10 -1.0
2,755,728 - MPMX19_02638 0.10 +1.2
2,755,728 - MPMX19_02638 0.10 +0.7
2,755,728 - MPMX19_02638 0.10 -0.7
2,755,728 - MPMX19_02638 0.10 -0.2
2,755,728 - MPMX19_02638 0.10 -0.4
2,755,728 - MPMX19_02638 0.10 +0.6
2,755,728 - MPMX19_02638 0.10 -1.4
2,755,847 + MPMX19_02638 0.34 -1.5
2,755,847 + MPMX19_02638 0.34 +0.1
2,755,847 + MPMX19_02638 0.34 -0.2
2,755,847 + MPMX19_02638 0.34 -1.5
2,755,847 + MPMX19_02638 0.34 -1.7
2,755,847 + MPMX19_02638 0.34 -2.7
2,755,847 + MPMX19_02638 0.34 -0.2
2,755,847 + MPMX19_02638 0.34 +0.9
2,755,847 + MPMX19_02638 0.34 -0.9
2,755,847 + MPMX19_02638 0.34 +0.0
2,755,847 + MPMX19_02638 0.34 +0.4
2,755,847 + MPMX19_02638 0.34 +0.5
2,755,847 + MPMX19_02638 0.34 -0.5
2,755,847 + MPMX19_02638 0.34 -0.5
2,755,847 + MPMX19_02638 0.34 -1.0
2,755,847 + MPMX19_02638 0.34 -1.5
2,755,847 + MPMX19_02638 0.34 -0.9
2,755,847 + MPMX19_02638 0.34 +1.2
2,755,847 + MPMX19_02638 0.34 -0.4
2,755,847 + MPMX19_02638 0.34 -0.2
2,755,847 + MPMX19_02638 0.34 -0.8
2,755,847 + MPMX19_02638 0.34 -0.7
2,755,848 - MPMX19_02638 0.35 -3.3
2,755,848 - MPMX19_02638 0.35 +0.4
2,755,848 - MPMX19_02638 0.35 -0.9
2,755,848 - MPMX19_02638 0.35 +0.1
2,755,848 - MPMX19_02638 0.35 +0.6
2,755,848 - MPMX19_02638 0.35 -1.7
2,755,848 - MPMX19_02638 0.35 -1.6
2,755,848 - MPMX19_02638 0.35 -1.2
2,755,848 - MPMX19_02638 0.35 -1.8
2,755,848 - MPMX19_02638 0.35 -0.6
2,755,848 - MPMX19_02638 0.35 -0.7
2,755,848 - MPMX19_02638 0.35 +0.6
2,755,848 - MPMX19_02638 0.35 +0.2
2,755,848 - MPMX19_02638 0.35 -1.4
2,755,848 - MPMX19_02638 0.35 -1.3
2,755,848 - MPMX19_02638 0.35 -0.4
2,755,848 - MPMX19_02638 0.35 +0.1
2,755,848 - MPMX19_02638 0.35 -0.7
2,755,848 - MPMX19_02638 0.35 -0.8
2,755,848 - MPMX19_02638 0.35 -0.9
2,755,848 - MPMX19_02638 0.35 +2.4
2,755,848 - MPMX19_02638 0.35 -0.2
2,755,848 - MPMX19_02638 0.35 -1.7
2,755,883 + MPMX19_02638 0.42 +0.8
2,755,883 + MPMX19_02638 0.42 -0.4
2,755,883 + MPMX19_02638 0.42 -0.0
2,755,883 + MPMX19_02638 0.42 -0.7
2,755,883 + MPMX19_02638 0.42 -1.0
2,755,883 + MPMX19_02638 0.42 -1.2
2,755,883 + MPMX19_02638 0.42 +0.4
2,755,883 + MPMX19_02638 0.42 -0.1
2,755,883 + MPMX19_02638 0.42 -0.3
2,755,883 + MPMX19_02638 0.42 +0.5
2,755,884 - MPMX19_02638 0.42 -1.3
2,755,884 - MPMX19_02638 0.42 -2.2
2,755,884 - MPMX19_02638 0.42 +0.4
2,755,884 - MPMX19_02638 0.42 -2.1
2,755,884 - MPMX19_02638 0.42 -0.5
2,756,128 + -0.4
2,756,128 + -1.3
2,756,128 + -0.5
2,756,128 + -0.0
2,756,129 - -0.9
2,756,129 - +0.9
2,756,129 - +0.5
2,756,129 - +2.1
2,756,129 - -0.2
2,756,129 - +0.1
2,756,129 - +0.2
2,756,129 - -0.6
2,756,224 + -1.0
2,756,224 + +0.1
2,756,224 + +0.8
2,756,224 + -1.0
2,756,224 + -0.7
2,756,224 + -0.7
2,756,224 + -1.0
2,756,224 + +1.0
2,756,224 + -0.4
2,756,224 + -0.6
2,756,224 + -0.6
2,756,224 + +0.8
2,756,224 + -0.6
2,756,225 - -0.9
2,756,225 - -0.7
2,756,225 - -0.2
2,756,225 - -0.9
2,756,225 - +0.8
2,756,225 - -1.7
2,756,225 - -0.2
2,756,225 - +0.6
2,756,225 - -1.2
2,756,225 - +0.3
2,756,225 - -1.0
2,756,225 - +0.4
2,756,225 - +0.4
2,756,225 - +0.8
2,756,225 - +0.0
2,756,225 - +0.1
2,756,225 - -0.5
2,756,225 - -1.6
2,756,225 - -1.7
2,756,225 - -0.4
2,756,225 - -1.8
2,756,225 - +0.6
2,758,310 - -0.9
2,758,427 + +0.8
2,758,427 + -1.8
2,758,427 + -0.7
2,758,427 + -1.6
2,758,427 + -0.6
2,758,427 + +1.4
2,758,427 + -1.2
2,758,427 + -0.3
2,758,427 + -2.2
2,758,427 + -0.6
2,758,428 - -0.2
2,758,428 - -0.2
2,758,428 - +0.1

Or see this region's nucleotide sequence