Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02554 and MPMX19_02555 are separated by 381 nucleotides MPMX19_02555 and MPMX19_02556 are separated by 68 nucleotides MPMX19_02556 and MPMX19_02557 are separated by 92 nucleotides
MPMX19_02554: MPMX19_02554 - Transcription termination factor Rho, at 2,669,812 to 2,671,068
_02554
MPMX19_02555: MPMX19_02555 - hypothetical protein, at 2,671,450 to 2,671,878
_02555
MPMX19_02556: MPMX19_02556 - Ferrochelatase, at 2,671,947 to 2,673,101
_02556
MPMX19_02557: MPMX19_02557 - Uroporphyrinogen decarboxylase, at 2,673,194 to 2,674,297
_02557
Position (kb)
2671
2672
2673
2674 Strain fitness (log2 ratio)
-2
-1
0
1 at 2671.901 kb on - strand at 2671.901 kb on - strand at 2673.112 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 2,671,901 - -0.2 2,671,901 - -0.4 2,673,112 - +0.5 2,673,170 - -0.1 2,673,170 - -1.4 2,673,170 - -1.4 2,673,170 - -0.2 2,673,170 - -0.5 2,673,170 - -0.7 2,673,170 - -0.7 2,673,170 - -0.7 2,673,170 - +0.4 2,673,170 - -0.7 2,673,170 - +0.1 2,673,170 - -2.6 2,673,170 - -1.1 2,673,170 - -2.4
Or see this region's nucleotide sequence