Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02475 and MPMX19_02476 are separated by 78 nucleotides MPMX19_02476 and MPMX19_02477 are separated by 94 nucleotides MPMX19_02477 and MPMX19_02478 are separated by 13 nucleotides MPMX19_02478 and MPMX19_02479 are separated by 3 nucleotides
MPMX19_02475: MPMX19_02475 - HTH-type transcriptional regulator ArgP, at 2,595,997 to 2,596,896
_02475
MPMX19_02476: MPMX19_02476 - hypothetical protein, at 2,596,975 to 2,597,343
_02476
MPMX19_02477: MPMX19_02477 - Tryptophan--tRNA ligase, at 2,597,438 to 2,598,436
_02477
MPMX19_02478: MPMX19_02478 - Pyrrolidone-carboxylate peptidase, at 2,598,450 to 2,599,127
_02478
MPMX19_02479: MPMX19_02479 - hypothetical protein, at 2,599,131 to 2,599,505
_02479
Position (kb)
2597
2598
2599 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2596.565 kb on + strand, within MPMX19_02475 at 2596.565 kb on + strand, within MPMX19_02475 at 2596.565 kb on + strand, within MPMX19_02475 at 2596.565 kb on + strand, within MPMX19_02475 at 2596.566 kb on - strand, within MPMX19_02475 at 2596.566 kb on - strand, within MPMX19_02475 at 2596.566 kb on - strand, within MPMX19_02475 at 2596.566 kb on - strand, within MPMX19_02475 at 2596.881 kb on + strand at 2596.882 kb on - strand at 2596.884 kb on + strand at 2596.906 kb on + strand at 2596.906 kb on + strand at 2596.906 kb on + strand at 2596.906 kb on + strand at 2596.906 kb on + strand at 2596.906 kb on + strand at 2596.906 kb on + strand at 2596.906 kb on + strand at 2596.907 kb on - strand at 2596.907 kb on - strand at 2596.933 kb on + strand at 2596.933 kb on + strand at 2596.933 kb on + strand at 2596.933 kb on + strand at 2596.933 kb on + strand at 2596.934 kb on - strand at 2596.934 kb on - strand at 2596.934 kb on - strand at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.062 kb on + strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.063 kb on - strand, within MPMX19_02476 at 2597.256 kb on + strand, within MPMX19_02476 at 2597.256 kb on + strand, within MPMX19_02476 at 2597.256 kb on + strand, within MPMX19_02476 at 2597.256 kb on + strand, within MPMX19_02476 at 2597.256 kb on + strand, within MPMX19_02476 at 2597.256 kb on + strand, within MPMX19_02476 at 2597.256 kb on + strand, within MPMX19_02476 at 2597.256 kb on + strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.257 kb on - strand, within MPMX19_02476 at 2597.341 kb on + strand at 2597.341 kb on + strand at 2597.341 kb on + strand at 2597.400 kb on + strand at 2597.400 kb on + strand at 2597.400 kb on + strand at 2597.400 kb on + strand at 2598.434 kb on + strand at 2598.434 kb on + strand at 2598.434 kb on + strand at 2598.435 kb on - strand at 2598.440 kb on + strand at 2598.440 kb on + strand at 2598.441 kb on - strand at 2598.441 kb on - strand at 2598.441 kb on - strand at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.633 kb on + strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.634 kb on - strand, within MPMX19_02478 at 2598.705 kb on + strand, within MPMX19_02478 at 2598.705 kb on + strand, within MPMX19_02478 at 2598.706 kb on - strand, within MPMX19_02478 at 2598.723 kb on + strand, within MPMX19_02478 at 2598.723 kb on + strand, within MPMX19_02478 at 2598.723 kb on + strand, within MPMX19_02478 at 2598.723 kb on + strand, within MPMX19_02478 at 2598.723 kb on + strand, within MPMX19_02478 at 2598.723 kb on + strand, within MPMX19_02478 at 2598.723 kb on + strand, within MPMX19_02478 at 2598.723 kb on + strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.724 kb on - strand, within MPMX19_02478 at 2598.832 kb on - strand, within MPMX19_02478 at 2598.832 kb on - strand, within MPMX19_02478 at 2598.939 kb on + strand, within MPMX19_02478 at 2598.939 kb on + strand, within MPMX19_02478 at 2598.940 kb on - strand, within MPMX19_02478 at 2598.940 kb on - strand, within MPMX19_02478 at 2598.940 kb on - strand, within MPMX19_02478 at 2598.953 kb on + strand, within MPMX19_02478 at 2598.953 kb on + strand, within MPMX19_02478 at 2598.954 kb on - strand, within MPMX19_02478 at 2598.954 kb on - strand, within MPMX19_02478 at 2598.954 kb on - strand, within MPMX19_02478 at 2598.954 kb on - strand, within MPMX19_02478 at 2598.954 kb on - strand, within MPMX19_02478 at 2598.954 kb on - strand, within MPMX19_02478 at 2598.984 kb on + strand, within MPMX19_02478 at 2598.985 kb on - strand, within MPMX19_02478 at 2598.985 kb on - strand, within MPMX19_02478 at 2599.121 kb on + strand at 2599.121 kb on + strand at 2599.121 kb on + strand at 2599.121 kb on + strand at 2599.121 kb on + strand at 2599.122 kb on - strand at 2599.122 kb on - strand at 2599.122 kb on - strand at 2599.122 kb on - strand at 2599.122 kb on - strand at 2599.122 kb on - strand at 2599.122 kb on - strand at 2599.125 kb on + strand at 2599.125 kb on + strand at 2599.125 kb on + strand at 2599.126 kb on - strand at 2599.126 kb on - strand at 2599.126 kb on - strand at 2599.126 kb on - strand at 2599.126 kb on - strand at 2599.415 kb on - strand, within MPMX19_02479 at 2599.415 kb on - strand, within MPMX19_02479 at 2599.415 kb on - strand, within MPMX19_02479
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 2,596,565 + MPMX19_02475 0.63 +0.8 2,596,565 + MPMX19_02475 0.63 +0.6 2,596,565 + MPMX19_02475 0.63 -0.2 2,596,565 + MPMX19_02475 0.63 -1.0 2,596,566 - MPMX19_02475 0.63 -0.2 2,596,566 - MPMX19_02475 0.63 +0.6 2,596,566 - MPMX19_02475 0.63 +1.4 2,596,566 - MPMX19_02475 0.63 -1.7 2,596,881 + -2.0 2,596,882 - -0.5 2,596,884 + -0.4 2,596,906 + +2.4 2,596,906 + -2.0 2,596,906 + -1.3 2,596,906 + -1.3 2,596,906 + -0.8 2,596,906 + +0.1 2,596,906 + -1.2 2,596,906 + -2.2 2,596,907 - +0.3 2,596,907 - -0.1 2,596,933 + -0.6 2,596,933 + +0.6 2,596,933 + -0.5 2,596,933 + -2.2 2,596,933 + +1.3 2,596,934 - -1.1 2,596,934 - +0.4 2,596,934 - -0.7 2,597,062 + MPMX19_02476 0.24 -0.2 2,597,062 + MPMX19_02476 0.24 -2.3 2,597,062 + MPMX19_02476 0.24 -0.3 2,597,062 + MPMX19_02476 0.24 -0.4 2,597,062 + MPMX19_02476 0.24 -1.7 2,597,062 + MPMX19_02476 0.24 -1.4 2,597,062 + MPMX19_02476 0.24 +0.2 2,597,062 + MPMX19_02476 0.24 -1.7 2,597,062 + MPMX19_02476 0.24 -0.4 2,597,062 + MPMX19_02476 0.24 -0.4 2,597,062 + MPMX19_02476 0.24 +0.1 2,597,062 + MPMX19_02476 0.24 -0.9 2,597,062 + MPMX19_02476 0.24 -0.3 2,597,062 + MPMX19_02476 0.24 +0.0 2,597,062 + MPMX19_02476 0.24 -0.5 2,597,062 + MPMX19_02476 0.24 -1.2 2,597,062 + MPMX19_02476 0.24 -1.1 2,597,062 + MPMX19_02476 0.24 +0.2 2,597,062 + MPMX19_02476 0.24 +0.1 2,597,062 + MPMX19_02476 0.24 -0.7 2,597,063 - MPMX19_02476 0.24 -1.0 2,597,063 - MPMX19_02476 0.24 +0.3 2,597,063 - MPMX19_02476 0.24 +0.4 2,597,063 - MPMX19_02476 0.24 +0.0 2,597,063 - MPMX19_02476 0.24 -0.8 2,597,063 - MPMX19_02476 0.24 -1.8 2,597,063 - MPMX19_02476 0.24 -0.6 2,597,063 - MPMX19_02476 0.24 -2.0 2,597,063 - MPMX19_02476 0.24 -0.4 2,597,063 - MPMX19_02476 0.24 -0.7 2,597,063 - MPMX19_02476 0.24 -0.4 2,597,063 - MPMX19_02476 0.24 -0.8 2,597,063 - MPMX19_02476 0.24 -0.5 2,597,063 - MPMX19_02476 0.24 +0.2 2,597,063 - MPMX19_02476 0.24 -1.3 2,597,063 - MPMX19_02476 0.24 -1.0 2,597,063 - MPMX19_02476 0.24 -0.5 2,597,063 - MPMX19_02476 0.24 -1.2 2,597,063 - MPMX19_02476 0.24 -1.2 2,597,063 - MPMX19_02476 0.24 -0.8 2,597,063 - MPMX19_02476 0.24 -1.7 2,597,063 - MPMX19_02476 0.24 -1.4 2,597,063 - MPMX19_02476 0.24 +0.3 2,597,063 - MPMX19_02476 0.24 -2.4 2,597,063 - MPMX19_02476 0.24 -1.2 2,597,063 - MPMX19_02476 0.24 -0.6 2,597,063 - MPMX19_02476 0.24 -0.6 2,597,063 - MPMX19_02476 0.24 -0.6 2,597,063 - MPMX19_02476 0.24 -1.2 2,597,063 - MPMX19_02476 0.24 +0.6 2,597,256 + MPMX19_02476 0.76 -2.4 2,597,256 + MPMX19_02476 0.76 -0.3 2,597,256 + MPMX19_02476 0.76 -0.1 2,597,256 + MPMX19_02476 0.76 -0.6 2,597,256 + MPMX19_02476 0.76 -2.1 2,597,256 + MPMX19_02476 0.76 -1.2 2,597,256 + MPMX19_02476 0.76 -0.9 2,597,256 + MPMX19_02476 0.76 +1.4 2,597,257 - MPMX19_02476 0.76 +0.8 2,597,257 - MPMX19_02476 0.76 -2.8 2,597,257 - MPMX19_02476 0.76 -1.2 2,597,257 - MPMX19_02476 0.76 -2.3 2,597,257 - MPMX19_02476 0.76 +0.4 2,597,257 - MPMX19_02476 0.76 -0.0 2,597,257 - MPMX19_02476 0.76 -0.7 2,597,257 - MPMX19_02476 0.76 -0.2 2,597,257 - MPMX19_02476 0.76 -0.2 2,597,257 - MPMX19_02476 0.76 -1.0 2,597,257 - MPMX19_02476 0.76 +0.1 2,597,257 - MPMX19_02476 0.76 -0.7 2,597,257 - MPMX19_02476 0.76 +0.3 2,597,257 - MPMX19_02476 0.76 +0.7 2,597,257 - MPMX19_02476 0.76 -0.7 2,597,257 - MPMX19_02476 0.76 -2.2 2,597,341 + -2.0 2,597,341 + -1.1 2,597,341 + -0.6 2,597,400 + -0.6 2,597,400 + -0.7 2,597,400 + -0.7 2,597,400 + -0.4 2,598,434 + +0.0 2,598,434 + -0.5 2,598,434 + -1.2 2,598,435 - +0.1 2,598,440 + -0.9 2,598,440 + +0.4 2,598,441 - -0.1 2,598,441 - -1.2 2,598,441 - +0.3 2,598,633 + MPMX19_02478 0.27 -1.5 2,598,633 + MPMX19_02478 0.27 +0.8 2,598,633 + MPMX19_02478 0.27 -1.5 2,598,633 + MPMX19_02478 0.27 +0.3 2,598,633 + MPMX19_02478 0.27 -0.7 2,598,633 + MPMX19_02478 0.27 -0.6 2,598,633 + MPMX19_02478 0.27 -1.0 2,598,633 + MPMX19_02478 0.27 +0.8 2,598,633 + MPMX19_02478 0.27 -0.9 2,598,633 + MPMX19_02478 0.27 -1.4 2,598,633 + MPMX19_02478 0.27 +1.4 2,598,633 + MPMX19_02478 0.27 -0.7 2,598,633 + MPMX19_02478 0.27 -1.7 2,598,634 - MPMX19_02478 0.27 -0.8 2,598,634 - MPMX19_02478 0.27 -1.3 2,598,634 - MPMX19_02478 0.27 -1.0 2,598,634 - MPMX19_02478 0.27 +0.4 2,598,634 - MPMX19_02478 0.27 +0.4 2,598,634 - MPMX19_02478 0.27 +1.1 2,598,634 - MPMX19_02478 0.27 -0.9 2,598,634 - MPMX19_02478 0.27 -2.0 2,598,634 - MPMX19_02478 0.27 -0.4 2,598,634 - MPMX19_02478 0.27 -1.4 2,598,634 - MPMX19_02478 0.27 -1.3 2,598,634 - MPMX19_02478 0.27 -1.6 2,598,634 - MPMX19_02478 0.27 +0.4 2,598,634 - MPMX19_02478 0.27 -1.2 2,598,634 - MPMX19_02478 0.27 +0.8 2,598,634 - MPMX19_02478 0.27 +0.4 2,598,634 - MPMX19_02478 0.27 -1.4 2,598,634 - MPMX19_02478 0.27 -0.4 2,598,634 - MPMX19_02478 0.27 -0.7 2,598,634 - MPMX19_02478 0.27 -0.5 2,598,634 - MPMX19_02478 0.27 -0.7 2,598,634 - MPMX19_02478 0.27 -1.0 2,598,634 - MPMX19_02478 0.27 -1.4 2,598,705 + MPMX19_02478 0.38 -0.7 2,598,705 + MPMX19_02478 0.38 -0.6 2,598,706 - MPMX19_02478 0.38 -0.2 2,598,723 + MPMX19_02478 0.40 -0.5 2,598,723 + MPMX19_02478 0.40 -1.3 2,598,723 + MPMX19_02478 0.40 +0.0 2,598,723 + MPMX19_02478 0.40 -2.0 2,598,723 + MPMX19_02478 0.40 -0.7 2,598,723 + MPMX19_02478 0.40 +0.4 2,598,723 + MPMX19_02478 0.40 -1.5 2,598,723 + MPMX19_02478 0.40 -0.3 2,598,724 - MPMX19_02478 0.40 -0.0 2,598,724 - MPMX19_02478 0.40 -1.7 2,598,724 - MPMX19_02478 0.40 -0.5 2,598,724 - MPMX19_02478 0.40 -1.0 2,598,724 - MPMX19_02478 0.40 -1.1 2,598,724 - MPMX19_02478 0.40 -0.2 2,598,724 - MPMX19_02478 0.40 -1.5 2,598,724 - MPMX19_02478 0.40 +0.1 2,598,724 - MPMX19_02478 0.40 -0.7 2,598,724 - MPMX19_02478 0.40 -0.5 2,598,724 - MPMX19_02478 0.40 +0.3 2,598,724 - MPMX19_02478 0.40 -1.7 2,598,724 - MPMX19_02478 0.40 +0.8 2,598,832 - MPMX19_02478 0.56 -2.3 2,598,832 - MPMX19_02478 0.56 -1.0 2,598,939 + MPMX19_02478 0.72 -0.4 2,598,939 + MPMX19_02478 0.72 +0.6 2,598,940 - MPMX19_02478 0.72 +1.2 2,598,940 - MPMX19_02478 0.72 +0.3 2,598,940 - MPMX19_02478 0.72 -0.9 2,598,953 + MPMX19_02478 0.74 -1.0 2,598,953 + MPMX19_02478 0.74 +0.2 2,598,954 - MPMX19_02478 0.74 +1.3 2,598,954 - MPMX19_02478 0.74 -1.4 2,598,954 - MPMX19_02478 0.74 -1.4 2,598,954 - MPMX19_02478 0.74 -1.0 2,598,954 - MPMX19_02478 0.74 -1.4 2,598,954 - MPMX19_02478 0.74 -3.6 2,598,984 + MPMX19_02478 0.79 -0.0 2,598,985 - MPMX19_02478 0.79 -0.6 2,598,985 - MPMX19_02478 0.79 -0.6 2,599,121 + +0.8 2,599,121 + -0.4 2,599,121 + +0.2 2,599,121 + +0.3 2,599,121 + -0.4 2,599,122 - +0.1 2,599,122 - -0.1 2,599,122 - -2.0 2,599,122 - -0.2 2,599,122 - -1.7 2,599,122 - -2.2 2,599,122 - -1.3 2,599,125 + -0.6 2,599,125 + -0.8 2,599,125 + -0.4 2,599,126 - -0.2 2,599,126 - -0.6 2,599,126 - -0.6 2,599,126 - +0.1 2,599,126 - -1.5 2,599,415 - MPMX19_02479 0.76 +1.4 2,599,415 - MPMX19_02479 0.76 -0.4 2,599,415 - MPMX19_02479 0.76 +0.1
Or see this region's nucleotide sequence