Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02474

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02472 and MPMX19_02473 are separated by 27 nucleotidesMPMX19_02473 and MPMX19_02474 are separated by 22 nucleotidesMPMX19_02474 and MPMX19_02475 are separated by 72 nucleotides MPMX19_02472: MPMX19_02472 - hypothetical protein, at 2,593,713 to 2,594,081 _02472 MPMX19_02473: MPMX19_02473 - hypothetical protein, at 2,594,109 to 2,594,954 _02473 MPMX19_02474: MPMX19_02474 - Glutathione synthetase, at 2,594,977 to 2,595,924 _02474 MPMX19_02475: MPMX19_02475 - HTH-type transcriptional regulator ArgP, at 2,595,997 to 2,596,896 _02475 Position (kb) 2594 2595 2596Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2593.995 kb on + strand, within MPMX19_02472at 2593.995 kb on + strand, within MPMX19_02472at 2593.996 kb on - strand, within MPMX19_02472at 2593.996 kb on - strand, within MPMX19_02472at 2593.996 kb on - strand, within MPMX19_02472at 2594.004 kb on + strand, within MPMX19_02472at 2594.004 kb on + strand, within MPMX19_02472at 2594.004 kb on + strand, within MPMX19_02472at 2594.004 kb on + strand, within MPMX19_02472at 2594.004 kb on + strand, within MPMX19_02472at 2594.004 kb on + strand, within MPMX19_02472at 2594.005 kb on - strand, within MPMX19_02472at 2594.005 kb on - strand, within MPMX19_02472at 2594.005 kb on - strand, within MPMX19_02472at 2594.005 kb on - strand, within MPMX19_02472at 2594.005 kb on - strand, within MPMX19_02472at 2594.005 kb on - strand, within MPMX19_02472at 2594.238 kb on + strand, within MPMX19_02473at 2594.249 kb on + strand, within MPMX19_02473at 2594.367 kb on + strand, within MPMX19_02473at 2594.367 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.388 kb on + strand, within MPMX19_02473at 2594.389 kb on - strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.466 kb on + strand, within MPMX19_02473at 2594.467 kb on - strand, within MPMX19_02473at 2594.467 kb on - strand, within MPMX19_02473at 2594.510 kb on + strand, within MPMX19_02473at 2594.510 kb on + strand, within MPMX19_02473at 2594.510 kb on + strand, within MPMX19_02473at 2594.510 kb on + strand, within MPMX19_02473at 2594.510 kb on + strand, within MPMX19_02473at 2594.510 kb on + strand, within MPMX19_02473at 2594.510 kb on + strand, within MPMX19_02473at 2594.627 kb on + strand, within MPMX19_02473at 2594.664 kb on + strand, within MPMX19_02473at 2594.664 kb on + strand, within MPMX19_02473at 2594.664 kb on + strand, within MPMX19_02473at 2594.665 kb on - strand, within MPMX19_02473at 2594.665 kb on - strand, within MPMX19_02473at 2594.665 kb on - strand, within MPMX19_02473at 2594.665 kb on - strand, within MPMX19_02473at 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.922 kb on + strandat 2595.923 kb on - strandat 2595.923 kb on - strandat 2595.923 kb on - strandat 2595.923 kb on - strandat 2595.923 kb on - strandat 2595.923 kb on - strandat 2595.923 kb on - strandat 2595.923 kb on - strandat 2595.923 kb on - strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.946 kb on + strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.947 kb on - strandat 2595.952 kb on + strandat 2595.952 kb on + strandat 2595.953 kb on - strandat 2595.953 kb on - strandat 2595.953 kb on - strandat 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.340 kb on + strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.341 kb on - strand, within MPMX19_02475at 2596.565 kb on + strand, within MPMX19_02475at 2596.565 kb on + strand, within MPMX19_02475at 2596.565 kb on + strand, within MPMX19_02475at 2596.565 kb on + strand, within MPMX19_02475at 2596.566 kb on - strand, within MPMX19_02475at 2596.566 kb on - strand, within MPMX19_02475at 2596.566 kb on - strand, within MPMX19_02475at 2596.566 kb on - strand, within MPMX19_02475at 2596.881 kb on + strandat 2596.882 kb on - strandat 2596.884 kb on + strandat 2596.906 kb on + strandat 2596.906 kb on + strandat 2596.906 kb on + strandat 2596.906 kb on + strandat 2596.906 kb on + strandat 2596.906 kb on + strandat 2596.906 kb on + strandat 2596.906 kb on + strandat 2596.907 kb on - strandat 2596.907 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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2,593,995 + MPMX19_02472 0.76 +0.8
2,593,995 + MPMX19_02472 0.76 -1.2
2,593,996 - MPMX19_02472 0.77 -0.0
2,593,996 - MPMX19_02472 0.77 -0.6
2,593,996 - MPMX19_02472 0.77 -0.7
2,594,004 + MPMX19_02472 0.79 +1.0
2,594,004 + MPMX19_02472 0.79 +0.1
2,594,004 + MPMX19_02472 0.79 -0.4
2,594,004 + MPMX19_02472 0.79 +0.7
2,594,004 + MPMX19_02472 0.79 -0.2
2,594,004 + MPMX19_02472 0.79 -0.4
2,594,005 - MPMX19_02472 0.79 -0.4
2,594,005 - MPMX19_02472 0.79 -0.7
2,594,005 - MPMX19_02472 0.79 +0.2
2,594,005 - MPMX19_02472 0.79 +0.1
2,594,005 - MPMX19_02472 0.79 -1.2
2,594,005 - MPMX19_02472 0.79 -1.2
2,594,238 + MPMX19_02473 0.15 -0.6
2,594,249 + MPMX19_02473 0.17 -1.7
2,594,367 + MPMX19_02473 0.30 -0.9
2,594,367 + MPMX19_02473 0.30 +0.7
2,594,388 + MPMX19_02473 0.33 +0.1
2,594,388 + MPMX19_02473 0.33 -0.5
2,594,388 + MPMX19_02473 0.33 -0.9
2,594,388 + MPMX19_02473 0.33 -0.4
2,594,388 + MPMX19_02473 0.33 +0.6
2,594,388 + MPMX19_02473 0.33 -0.4
2,594,388 + MPMX19_02473 0.33 -1.0
2,594,388 + MPMX19_02473 0.33 -0.7
2,594,388 + MPMX19_02473 0.33 +0.4
2,594,388 + MPMX19_02473 0.33 -1.8
2,594,388 + MPMX19_02473 0.33 -1.3
2,594,388 + MPMX19_02473 0.33 -0.2
2,594,388 + MPMX19_02473 0.33 -1.0
2,594,388 + MPMX19_02473 0.33 -1.0
2,594,388 + MPMX19_02473 0.33 -1.3
2,594,388 + MPMX19_02473 0.33 -0.4
2,594,388 + MPMX19_02473 0.33 -1.2
2,594,388 + MPMX19_02473 0.33 -0.4
2,594,388 + MPMX19_02473 0.33 -1.6
2,594,388 + MPMX19_02473 0.33 -2.7
2,594,388 + MPMX19_02473 0.33 +0.4
2,594,388 + MPMX19_02473 0.33 -1.3
2,594,388 + MPMX19_02473 0.33 +0.1
2,594,388 + MPMX19_02473 0.33 -1.2
2,594,389 - MPMX19_02473 0.33 +0.1
2,594,466 + MPMX19_02473 0.42 -0.6
2,594,466 + MPMX19_02473 0.42 -0.6
2,594,466 + MPMX19_02473 0.42 -0.6
2,594,466 + MPMX19_02473 0.42 +0.8
2,594,466 + MPMX19_02473 0.42 +0.1
2,594,466 + MPMX19_02473 0.42 -1.2
2,594,466 + MPMX19_02473 0.42 -0.7
2,594,466 + MPMX19_02473 0.42 -0.8
2,594,466 + MPMX19_02473 0.42 +0.8
2,594,466 + MPMX19_02473 0.42 +0.1
2,594,466 + MPMX19_02473 0.42 -1.0
2,594,466 + MPMX19_02473 0.42 -0.2
2,594,466 + MPMX19_02473 0.42 -1.0
2,594,466 + MPMX19_02473 0.42 -1.7
2,594,466 + MPMX19_02473 0.42 -0.6
2,594,466 + MPMX19_02473 0.42 -1.3
2,594,466 + MPMX19_02473 0.42 -0.4
2,594,466 + MPMX19_02473 0.42 +0.1
2,594,466 + MPMX19_02473 0.42 +0.1
2,594,466 + MPMX19_02473 0.42 -0.7
2,594,466 + MPMX19_02473 0.42 -1.2
2,594,466 + MPMX19_02473 0.42 +0.3
2,594,466 + MPMX19_02473 0.42 +0.2
2,594,466 + MPMX19_02473 0.42 -0.9
2,594,466 + MPMX19_02473 0.42 -0.8
2,594,466 + MPMX19_02473 0.42 +0.3
2,594,466 + MPMX19_02473 0.42 -0.9
2,594,466 + MPMX19_02473 0.42 +0.6
2,594,466 + MPMX19_02473 0.42 +0.4
2,594,466 + MPMX19_02473 0.42 -1.2
2,594,466 + MPMX19_02473 0.42 -0.4
2,594,466 + MPMX19_02473 0.42 +0.4
2,594,466 + MPMX19_02473 0.42 +0.6
2,594,466 + MPMX19_02473 0.42 -0.9
2,594,466 + MPMX19_02473 0.42 -1.4
2,594,466 + MPMX19_02473 0.42 +0.5
2,594,467 - MPMX19_02473 0.42 +2.4
2,594,467 - MPMX19_02473 0.42 -0.3
2,594,510 + MPMX19_02473 0.47 -1.1
2,594,510 + MPMX19_02473 0.47 -1.9
2,594,510 + MPMX19_02473 0.47 -1.2
2,594,510 + MPMX19_02473 0.47 -0.5
2,594,510 + MPMX19_02473 0.47 -0.9
2,594,510 + MPMX19_02473 0.47 +0.1
2,594,510 + MPMX19_02473 0.47 -2.1
2,594,627 + MPMX19_02473 0.61 -0.5
2,594,664 + MPMX19_02473 0.66 -0.7
2,594,664 + MPMX19_02473 0.66 -0.5
2,594,664 + MPMX19_02473 0.66 -0.9
2,594,665 - MPMX19_02473 0.66 -1.6
2,594,665 - MPMX19_02473 0.66 -0.3
2,594,665 - MPMX19_02473 0.66 -2.1
2,594,665 - MPMX19_02473 0.66 -0.3
2,595,922 + -0.4
2,595,922 + -0.8
2,595,922 + +0.3
2,595,922 + +0.8
2,595,922 + -1.3
2,595,922 + -0.9
2,595,922 + -1.7
2,595,922 + -1.7
2,595,922 + +0.0
2,595,922 + +0.3
2,595,922 + -1.5
2,595,922 + -0.3
2,595,922 + +0.8
2,595,922 + -0.3
2,595,923 - -1.5
2,595,923 - -1.4
2,595,923 - +0.1
2,595,923 - -1.7
2,595,923 - +0.3
2,595,923 - +0.7
2,595,923 - +0.6
2,595,923 - -1.2
2,595,923 - -0.2
2,595,946 + +0.2
2,595,946 + -1.2
2,595,946 + -0.4
2,595,946 + -1.0
2,595,946 + -1.4
2,595,946 + +1.4
2,595,946 + -1.0
2,595,946 + +0.4
2,595,946 + -0.4
2,595,946 + -1.5
2,595,946 + +0.6
2,595,946 + -1.8
2,595,946 + +0.4
2,595,946 + -2.8
2,595,947 - -0.7
2,595,947 - -0.1
2,595,947 - -1.1
2,595,947 - -2.1
2,595,947 - -2.0
2,595,947 - -0.4
2,595,947 - -0.2
2,595,947 - -1.5
2,595,947 - -0.0
2,595,947 - -2.6
2,595,947 - +0.1
2,595,947 - -0.4
2,595,947 - +1.0
2,595,947 - -1.8
2,595,947 - +0.6
2,595,947 - +1.7
2,595,947 - -2.7
2,595,947 - +1.1
2,595,947 - -2.3
2,595,947 - +0.1
2,595,947 - +2.4
2,595,952 + -0.2
2,595,952 + +0.1
2,595,953 - -0.6
2,595,953 - -0.6
2,595,953 - -1.6
2,596,340 + MPMX19_02475 0.38 -1.0
2,596,340 + MPMX19_02475 0.38 +1.3
2,596,340 + MPMX19_02475 0.38 -0.8
2,596,340 + MPMX19_02475 0.38 -0.2
2,596,340 + MPMX19_02475 0.38 -0.0
2,596,340 + MPMX19_02475 0.38 -0.9
2,596,340 + MPMX19_02475 0.38 +0.5
2,596,340 + MPMX19_02475 0.38 -0.2
2,596,340 + MPMX19_02475 0.38 +0.0
2,596,340 + MPMX19_02475 0.38 -0.2
2,596,340 + MPMX19_02475 0.38 -0.5
2,596,340 + MPMX19_02475 0.38 -1.3
2,596,340 + MPMX19_02475 0.38 +0.7
2,596,340 + MPMX19_02475 0.38 +0.4
2,596,340 + MPMX19_02475 0.38 +0.1
2,596,340 + MPMX19_02475 0.38 +0.2
2,596,340 + MPMX19_02475 0.38 -0.5
2,596,340 + MPMX19_02475 0.38 -0.6
2,596,340 + MPMX19_02475 0.38 -0.4
2,596,340 + MPMX19_02475 0.38 -1.1
2,596,340 + MPMX19_02475 0.38 -0.7
2,596,340 + MPMX19_02475 0.38 -0.4
2,596,340 + MPMX19_02475 0.38 +0.6
2,596,341 - MPMX19_02475 0.38 -2.1
2,596,341 - MPMX19_02475 0.38 -0.0
2,596,341 - MPMX19_02475 0.38 +0.8
2,596,341 - MPMX19_02475 0.38 -0.3
2,596,341 - MPMX19_02475 0.38 -0.9
2,596,341 - MPMX19_02475 0.38 +0.4
2,596,341 - MPMX19_02475 0.38 +0.3
2,596,341 - MPMX19_02475 0.38 -1.5
2,596,341 - MPMX19_02475 0.38 -0.6
2,596,341 - MPMX19_02475 0.38 +0.4
2,596,341 - MPMX19_02475 0.38 -0.4
2,596,341 - MPMX19_02475 0.38 +0.8
2,596,341 - MPMX19_02475 0.38 -1.4
2,596,341 - MPMX19_02475 0.38 -0.6
2,596,341 - MPMX19_02475 0.38 -2.1
2,596,341 - MPMX19_02475 0.38 -0.3
2,596,341 - MPMX19_02475 0.38 -0.8
2,596,341 - MPMX19_02475 0.38 -0.3
2,596,565 + MPMX19_02475 0.63 +0.8
2,596,565 + MPMX19_02475 0.63 +0.6
2,596,565 + MPMX19_02475 0.63 -0.2
2,596,565 + MPMX19_02475 0.63 -1.0
2,596,566 - MPMX19_02475 0.63 -0.2
2,596,566 - MPMX19_02475 0.63 +0.6
2,596,566 - MPMX19_02475 0.63 +1.4
2,596,566 - MPMX19_02475 0.63 -1.7
2,596,881 + -2.0
2,596,882 - -0.5
2,596,884 + -0.4
2,596,906 + +2.4
2,596,906 + -2.0
2,596,906 + -1.3
2,596,906 + -1.3
2,596,906 + -0.8
2,596,906 + +0.1
2,596,906 + -1.2
2,596,906 + -2.2
2,596,907 - +0.3
2,596,907 - -0.1

Or see this region's nucleotide sequence