Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01932 and MPMX19_01933 overlap by 11 nucleotides MPMX19_01933 and MPMX19_01934 are separated by 5 nucleotides MPMX19_01934 and MPMX19_01935 are separated by 22 nucleotides
MPMX19_01932: MPMX19_01932 - GTPase Obg, at 2,013,412 to 2,014,719
_01932
MPMX19_01933: MPMX19_01933 - Glutamate 5-kinase, at 2,014,709 to 2,015,848
_01933
MPMX19_01934: MPMX19_01934 - Phosphorylated carbohydrates phosphatase, at 2,015,854 to 2,016,498
_01934
MPMX19_01935: MPMX19_01935 - hypothetical protein, at 2,016,521 to 2,017,099
_01935
Position (kb)
2014
2015
2016 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2014.689 kb on + strand at 2014.689 kb on + strand at 2015.899 kb on - strand at 2015.899 kb on - strand at 2015.899 kb on - strand at 2015.956 kb on + strand, within MPMX19_01934 at 2015.957 kb on - strand, within MPMX19_01934 at 2015.957 kb on - strand, within MPMX19_01934 at 2016.019 kb on + strand, within MPMX19_01934 at 2016.019 kb on + strand, within MPMX19_01934 at 2016.019 kb on + strand, within MPMX19_01934 at 2016.019 kb on + strand, within MPMX19_01934 at 2016.019 kb on + strand, within MPMX19_01934 at 2016.019 kb on + strand, within MPMX19_01934 at 2016.020 kb on - strand, within MPMX19_01934 at 2016.020 kb on - strand, within MPMX19_01934 at 2016.020 kb on - strand, within MPMX19_01934 at 2016.020 kb on - strand, within MPMX19_01934 at 2016.020 kb on - strand, within MPMX19_01934 at 2016.020 kb on - strand, within MPMX19_01934 at 2016.020 kb on - strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.091 kb on + strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.092 kb on - strand, within MPMX19_01934 at 2016.298 kb on + strand, within MPMX19_01934 at 2016.298 kb on + strand, within MPMX19_01934 at 2016.298 kb on + strand, within MPMX19_01934 at 2016.299 kb on - strand, within MPMX19_01934 at 2016.299 kb on - strand, within MPMX19_01934 at 2016.299 kb on - strand, within MPMX19_01934 at 2016.598 kb on - strand, within MPMX19_01935 at 2016.684 kb on + strand, within MPMX19_01935 at 2016.684 kb on + strand, within MPMX19_01935 at 2016.684 kb on + strand, within MPMX19_01935 at 2016.685 kb on - strand, within MPMX19_01935 at 2016.756 kb on + strand, within MPMX19_01935 at 2016.756 kb on + strand, within MPMX19_01935 at 2016.756 kb on + strand, within MPMX19_01935 at 2016.757 kb on - strand, within MPMX19_01935 at 2016.757 kb on - strand, within MPMX19_01935 at 2016.757 kb on - strand, within MPMX19_01935
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 2,014,689 + -0.2 2,014,689 + +0.1 2,015,899 - +2.4 2,015,899 - +0.3 2,015,899 - +0.0 2,015,956 + MPMX19_01934 0.16 -0.7 2,015,957 - MPMX19_01934 0.16 -1.1 2,015,957 - MPMX19_01934 0.16 -2.0 2,016,019 + MPMX19_01934 0.26 -1.8 2,016,019 + MPMX19_01934 0.26 +0.0 2,016,019 + MPMX19_01934 0.26 +0.7 2,016,019 + MPMX19_01934 0.26 -1.1 2,016,019 + MPMX19_01934 0.26 -1.1 2,016,019 + MPMX19_01934 0.26 -0.5 2,016,020 - MPMX19_01934 0.26 -1.0 2,016,020 - MPMX19_01934 0.26 +0.3 2,016,020 - MPMX19_01934 0.26 +0.6 2,016,020 - MPMX19_01934 0.26 +0.8 2,016,020 - MPMX19_01934 0.26 -0.7 2,016,020 - MPMX19_01934 0.26 +1.9 2,016,020 - MPMX19_01934 0.26 -1.6 2,016,091 + MPMX19_01934 0.37 -0.8 2,016,091 + MPMX19_01934 0.37 +0.0 2,016,091 + MPMX19_01934 0.37 -0.5 2,016,091 + MPMX19_01934 0.37 -2.2 2,016,091 + MPMX19_01934 0.37 -0.2 2,016,091 + MPMX19_01934 0.37 -0.2 2,016,091 + MPMX19_01934 0.37 +0.0 2,016,091 + MPMX19_01934 0.37 -3.2 2,016,091 + MPMX19_01934 0.37 -0.3 2,016,091 + MPMX19_01934 0.37 -0.8 2,016,091 + MPMX19_01934 0.37 -1.4 2,016,091 + MPMX19_01934 0.37 +1.0 2,016,091 + MPMX19_01934 0.37 -1.6 2,016,091 + MPMX19_01934 0.37 -1.3 2,016,092 - MPMX19_01934 0.37 +0.0 2,016,092 - MPMX19_01934 0.37 +0.9 2,016,092 - MPMX19_01934 0.37 -0.2 2,016,092 - MPMX19_01934 0.37 -1.0 2,016,092 - MPMX19_01934 0.37 +0.7 2,016,092 - MPMX19_01934 0.37 -1.0 2,016,092 - MPMX19_01934 0.37 +0.4 2,016,092 - MPMX19_01934 0.37 -0.5 2,016,092 - MPMX19_01934 0.37 +0.6 2,016,092 - MPMX19_01934 0.37 +1.0 2,016,298 + MPMX19_01934 0.69 -0.8 2,016,298 + MPMX19_01934 0.69 -1.2 2,016,298 + MPMX19_01934 0.69 +0.4 2,016,299 - MPMX19_01934 0.69 -2.8 2,016,299 - MPMX19_01934 0.69 -0.5 2,016,299 - MPMX19_01934 0.69 -0.9 2,016,598 - MPMX19_01935 0.13 +0.5 2,016,684 + MPMX19_01935 0.28 -0.8 2,016,684 + MPMX19_01935 0.28 -0.2 2,016,684 + MPMX19_01935 0.28 -1.3 2,016,685 - MPMX19_01935 0.28 -1.3 2,016,756 + MPMX19_01935 0.41 -0.6 2,016,756 + MPMX19_01935 0.41 -1.0 2,016,756 + MPMX19_01935 0.41 -0.8 2,016,757 - MPMX19_01935 0.41 -1.6 2,016,757 - MPMX19_01935 0.41 -1.1 2,016,757 - MPMX19_01935 0.41 +1.0
Or see this region's nucleotide sequence