Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01826 and MPMX19_01827 are separated by 202 nucleotides MPMX19_01827 and MPMX19_01828 are separated by 72 nucleotides MPMX19_01828 and MPMX19_01829 are separated by 57 nucleotides
MPMX19_01826: MPMX19_01826 - Polyphenol oxidase, at 1,908,735 to 1,909,502
_01826
MPMX19_01827: MPMX19_01827 - Ribose-phosphate pyrophosphokinase, at 1,909,705 to 1,910,640
_01827
MPMX19_01828: MPMX19_01828 - hypothetical protein, at 1,910,713 to 1,910,922
_01828
MPMX19_01829: MPMX19_01829 - hypothetical protein, at 1,910,980 to 1,911,678
_01829
Position (kb)
1909
1910
1911 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1908.819 kb on + strand, within MPMX19_01826 at 1908.819 kb on + strand, within MPMX19_01826 at 1908.819 kb on + strand, within MPMX19_01826 at 1908.819 kb on + strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1908.820 kb on - strand, within MPMX19_01826 at 1909.230 kb on + strand, within MPMX19_01826 at 1909.230 kb on + strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.231 kb on - strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.290 kb on + strand, within MPMX19_01826 at 1909.291 kb on - strand, within MPMX19_01826 at 1909.291 kb on - strand, within MPMX19_01826 at 1909.291 kb on - strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.341 kb on + strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.342 kb on - strand, within MPMX19_01826 at 1909.400 kb on + strand, within MPMX19_01826 at 1909.400 kb on + strand, within MPMX19_01826 at 1909.400 kb on + strand, within MPMX19_01826 at 1909.400 kb on + strand, within MPMX19_01826 at 1909.401 kb on - strand, within MPMX19_01826 at 1909.401 kb on - strand, within MPMX19_01826 at 1909.401 kb on - strand, within MPMX19_01826 at 1909.431 kb on + strand at 1909.431 kb on + strand at 1909.431 kb on + strand at 1909.432 kb on - strand at 1909.432 kb on - strand at 1909.432 kb on - strand at 1909.464 kb on + strand at 1909.464 kb on + strand at 1909.465 kb on - strand at 1909.465 kb on - strand at 1909.465 kb on - strand at 1910.638 kb on + strand at 1910.638 kb on + strand at 1910.639 kb on - strand at 1910.639 kb on - strand at 1910.653 kb on + strand at 1910.653 kb on + strand at 1910.923 kb on - strand at 1910.935 kb on + strand at 1910.935 kb on + strand at 1910.936 kb on - strand at 1910.968 kb on + strand at 1910.968 kb on + strand at 1910.969 kb on - strand at 1911.004 kb on + strand at 1911.004 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,908,819 + MPMX19_01826 0.11 +0.4 1,908,819 + MPMX19_01826 0.11 +0.6 1,908,819 + MPMX19_01826 0.11 -1.9 1,908,819 + MPMX19_01826 0.11 +1.4 1,908,820 - MPMX19_01826 0.11 -0.8 1,908,820 - MPMX19_01826 0.11 +0.2 1,908,820 - MPMX19_01826 0.11 -0.5 1,908,820 - MPMX19_01826 0.11 -1.8 1,908,820 - MPMX19_01826 0.11 -1.5 1,909,230 + MPMX19_01826 0.64 +0.1 1,909,230 + MPMX19_01826 0.64 -1.4 1,909,231 - MPMX19_01826 0.65 -1.4 1,909,231 - MPMX19_01826 0.65 +0.6 1,909,231 - MPMX19_01826 0.65 -0.2 1,909,231 - MPMX19_01826 0.65 -0.1 1,909,231 - MPMX19_01826 0.65 +1.6 1,909,231 - MPMX19_01826 0.65 +0.8 1,909,231 - MPMX19_01826 0.65 +1.1 1,909,231 - MPMX19_01826 0.65 -0.4 1,909,290 + MPMX19_01826 0.72 -1.2 1,909,290 + MPMX19_01826 0.72 +1.4 1,909,290 + MPMX19_01826 0.72 -0.4 1,909,290 + MPMX19_01826 0.72 +0.1 1,909,290 + MPMX19_01826 0.72 -1.2 1,909,290 + MPMX19_01826 0.72 +0.1 1,909,291 - MPMX19_01826 0.72 +0.1 1,909,291 - MPMX19_01826 0.72 -1.2 1,909,291 - MPMX19_01826 0.72 +1.4 1,909,341 + MPMX19_01826 0.79 -0.4 1,909,341 + MPMX19_01826 0.79 +0.4 1,909,341 + MPMX19_01826 0.79 -0.7 1,909,341 + MPMX19_01826 0.79 -0.1 1,909,341 + MPMX19_01826 0.79 -1.2 1,909,341 + MPMX19_01826 0.79 +0.1 1,909,341 + MPMX19_01826 0.79 +0.8 1,909,341 + MPMX19_01826 0.79 -0.8 1,909,341 + MPMX19_01826 0.79 -0.8 1,909,341 + MPMX19_01826 0.79 -0.6 1,909,341 + MPMX19_01826 0.79 +1.8 1,909,341 + MPMX19_01826 0.79 -0.8 1,909,341 + MPMX19_01826 0.79 -0.2 1,909,341 + MPMX19_01826 0.79 +0.4 1,909,341 + MPMX19_01826 0.79 -0.9 1,909,342 - MPMX19_01826 0.79 -0.4 1,909,342 - MPMX19_01826 0.79 -0.9 1,909,342 - MPMX19_01826 0.79 -0.6 1,909,342 - MPMX19_01826 0.79 -1.1 1,909,342 - MPMX19_01826 0.79 +0.8 1,909,342 - MPMX19_01826 0.79 -0.2 1,909,342 - MPMX19_01826 0.79 -0.8 1,909,400 + MPMX19_01826 0.87 -1.1 1,909,400 + MPMX19_01826 0.87 -1.7 1,909,400 + MPMX19_01826 0.87 +0.8 1,909,400 + MPMX19_01826 0.87 +0.4 1,909,401 - MPMX19_01826 0.87 -1.3 1,909,401 - MPMX19_01826 0.87 +1.1 1,909,401 - MPMX19_01826 0.87 +0.4 1,909,431 + -0.4 1,909,431 + +1.4 1,909,431 + -0.4 1,909,432 - -1.7 1,909,432 - +0.4 1,909,432 - +0.4 1,909,464 + -0.6 1,909,464 + +1.1 1,909,465 - -0.2 1,909,465 - -0.8 1,909,465 - -1.3 1,910,638 + -0.6 1,910,638 + -0.4 1,910,639 - +0.1 1,910,639 - -0.4 1,910,653 + +0.6 1,910,653 + -1.2 1,910,923 - +1.1 1,910,935 + -0.6 1,910,935 + -0.2 1,910,936 - +0.5 1,910,968 + -1.3 1,910,968 + -0.2 1,910,969 - -0.3 1,911,004 + +1.1 1,911,004 + -0.7
Or see this region's nucleotide sequence