Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01822 and MPMX19_01823 are separated by 126 nucleotides MPMX19_01823 and MPMX19_01824 are separated by 11 nucleotides MPMX19_01824 and MPMX19_01825 are separated by 4 nucleotides
MPMX19_01822: MPMX19_01822 - 2-isopropylmalate synthase, at 1,903,811 to 1,905,508
_01822
MPMX19_01823: MPMX19_01823 - ADP-L-glycero-D-manno-heptose-6-epimerase, at 1,905,635 to 1,906,621
_01823
MPMX19_01824: MPMX19_01824 - Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase, at 1,906,633 to 1,907,454
_01824
MPMX19_01825: MPMX19_01825 - hypothetical protein, at 1,907,459 to 1,908,592
_01825
Position (kb)
1905
1906
1907 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1904.813 kb on + strand, within MPMX19_01822 at 1904.814 kb on - strand, within MPMX19_01822 at 1904.814 kb on - strand, within MPMX19_01822 at 1904.814 kb on - strand, within MPMX19_01822 at 1904.922 kb on - strand, within MPMX19_01822 at 1904.922 kb on - strand, within MPMX19_01822 at 1904.922 kb on - strand, within MPMX19_01822 at 1904.922 kb on - strand, within MPMX19_01822 at 1904.957 kb on + strand, within MPMX19_01822 at 1904.957 kb on + strand, within MPMX19_01822 at 1904.957 kb on + strand, within MPMX19_01822 at 1904.957 kb on + strand, within MPMX19_01822 at 1904.957 kb on + strand, within MPMX19_01822 at 1904.957 kb on + strand, within MPMX19_01822 at 1904.957 kb on + strand, within MPMX19_01822 at 1904.958 kb on - strand, within MPMX19_01822 at 1904.958 kb on - strand, within MPMX19_01822 at 1904.958 kb on - strand, within MPMX19_01822 at 1904.958 kb on - strand, within MPMX19_01822 at 1904.958 kb on - strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.008 kb on + strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.009 kb on - strand, within MPMX19_01822 at 1905.026 kb on + strand, within MPMX19_01822 at 1905.146 kb on + strand, within MPMX19_01822 at 1905.146 kb on + strand, within MPMX19_01822 at 1905.146 kb on + strand, within MPMX19_01822 at 1905.146 kb on + strand, within MPMX19_01822 at 1905.146 kb on + strand, within MPMX19_01822 at 1905.147 kb on - strand, within MPMX19_01822 at 1905.147 kb on - strand, within MPMX19_01822 at 1905.395 kb on + strand at 1905.395 kb on + strand at 1905.395 kb on + strand at 1905.395 kb on + strand at 1905.395 kb on + strand at 1905.395 kb on + strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.396 kb on - strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.566 kb on + strand at 1905.567 kb on - strand at 1905.567 kb on - strand at 1905.567 kb on - strand at 1905.567 kb on - strand at 1905.567 kb on - strand at 1905.567 kb on - strand at 1905.567 kb on - strand at 1905.567 kb on - strand at 1905.567 kb on - strand at 1905.593 kb on + strand at 1905.593 kb on + strand at 1905.593 kb on + strand at 1905.593 kb on + strand at 1905.593 kb on + strand at 1905.593 kb on + strand at 1905.593 kb on + strand at 1905.593 kb on + strand at 1905.593 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.595 kb on + strand at 1905.596 kb on - strand at 1905.613 kb on + strand at 1905.613 kb on + strand at 1905.613 kb on + strand at 1905.634 kb on + strand at 1905.634 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,904,813 + MPMX19_01822 0.59 -0.6 1,904,814 - MPMX19_01822 0.59 -1.1 1,904,814 - MPMX19_01822 0.59 -0.4 1,904,814 - MPMX19_01822 0.59 -0.4 1,904,922 - MPMX19_01822 0.65 -0.2 1,904,922 - MPMX19_01822 0.65 -0.4 1,904,922 - MPMX19_01822 0.65 +0.4 1,904,922 - MPMX19_01822 0.65 -0.8 1,904,957 + MPMX19_01822 0.67 +0.1 1,904,957 + MPMX19_01822 0.67 -0.4 1,904,957 + MPMX19_01822 0.67 -0.9 1,904,957 + MPMX19_01822 0.67 +0.4 1,904,957 + MPMX19_01822 0.67 +0.1 1,904,957 + MPMX19_01822 0.67 -1.5 1,904,957 + MPMX19_01822 0.67 +0.1 1,904,958 - MPMX19_01822 0.68 +0.4 1,904,958 - MPMX19_01822 0.68 -0.8 1,904,958 - MPMX19_01822 0.68 -0.4 1,904,958 - MPMX19_01822 0.68 +2.4 1,904,958 - MPMX19_01822 0.68 +0.6 1,905,008 + MPMX19_01822 0.70 +0.6 1,905,008 + MPMX19_01822 0.70 +2.4 1,905,008 + MPMX19_01822 0.70 +1.1 1,905,008 + MPMX19_01822 0.70 -0.2 1,905,008 + MPMX19_01822 0.70 -0.2 1,905,008 + MPMX19_01822 0.70 +0.1 1,905,008 + MPMX19_01822 0.70 -1.2 1,905,008 + MPMX19_01822 0.70 +0.4 1,905,008 + MPMX19_01822 0.70 -0.6 1,905,009 - MPMX19_01822 0.71 +0.4 1,905,009 - MPMX19_01822 0.71 +2.1 1,905,009 - MPMX19_01822 0.71 -0.2 1,905,009 - MPMX19_01822 0.71 -0.6 1,905,009 - MPMX19_01822 0.71 +1.4 1,905,009 - MPMX19_01822 0.71 -0.6 1,905,009 - MPMX19_01822 0.71 -0.6 1,905,009 - MPMX19_01822 0.71 +0.2 1,905,009 - MPMX19_01822 0.71 -1.2 1,905,009 - MPMX19_01822 0.71 +0.4 1,905,026 + MPMX19_01822 0.72 +1.4 1,905,146 + MPMX19_01822 0.79 -0.6 1,905,146 + MPMX19_01822 0.79 +0.1 1,905,146 + MPMX19_01822 0.79 +0.1 1,905,146 + MPMX19_01822 0.79 -0.8 1,905,146 + MPMX19_01822 0.79 -1.1 1,905,147 - MPMX19_01822 0.79 +0.8 1,905,147 - MPMX19_01822 0.79 -0.6 1,905,395 + -0.4 1,905,395 + -1.5 1,905,395 + -0.2 1,905,395 + -0.2 1,905,395 + -2.2 1,905,395 + -0.4 1,905,396 - +0.2 1,905,396 - -0.1 1,905,396 - -0.8 1,905,396 - -0.8 1,905,396 - -1.8 1,905,396 - -2.1 1,905,396 - +0.4 1,905,396 - -0.8 1,905,396 - -0.1 1,905,396 - -0.4 1,905,566 + +0.8 1,905,566 + +0.2 1,905,566 + +0.1 1,905,566 + +0.1 1,905,566 + -0.7 1,905,566 + -0.2 1,905,566 + +0.3 1,905,566 + +0.4 1,905,566 + +0.2 1,905,566 + -1.3 1,905,566 + -2.1 1,905,566 + -1.5 1,905,567 - -0.3 1,905,567 - -1.7 1,905,567 - -2.3 1,905,567 - -0.3 1,905,567 - +0.8 1,905,567 - -0.8 1,905,567 - -1.6 1,905,567 - -1.5 1,905,567 - -1.0 1,905,593 + -1.1 1,905,593 + +0.6 1,905,593 + +1.4 1,905,593 + -0.4 1,905,593 + -2.3 1,905,593 + -0.5 1,905,593 + -0.4 1,905,593 + -1.1 1,905,593 + +0.3 1,905,595 + -1.7 1,905,595 + -0.3 1,905,595 + -0.6 1,905,595 + +0.4 1,905,595 + +0.1 1,905,595 + -0.4 1,905,595 + -1.2 1,905,595 + +0.5 1,905,595 + -0.6 1,905,595 + -0.2 1,905,595 + +0.4 1,905,595 + -0.9 1,905,595 + -0.9 1,905,595 + -1.1 1,905,595 + -0.4 1,905,595 + -1.6 1,905,595 + -2.6 1,905,595 + -2.1 1,905,595 + -0.2 1,905,595 + -1.5 1,905,595 + -1.8 1,905,596 - -1.0 1,905,613 + -0.5 1,905,613 + +0.4 1,905,613 + -1.0 1,905,634 + -0.1 1,905,634 + -0.8
Or see this region's nucleotide sequence