Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01772 and MPMX19_01773 are separated by 125 nucleotides MPMX19_01773 and MPMX19_01774 are separated by 55 nucleotides MPMX19_01774 and MPMX19_01775 are separated by 184 nucleotides MPMX19_01775 and MPMX19_01776 are separated by 36 nucleotides
MPMX19_01772: MPMX19_01772 - putative inner membrane transporter YedA, at 1,859,298 to 1,860,218
_01772
MPMX19_01773: MPMX19_01773 - hypothetical protein, at 1,860,344 to 1,861,075
_01773
MPMX19_01774: MPMX19_01774 - Ketol-acid reductoisomerase (NADP(+)), at 1,861,131 to 1,862,150
_01774
MPMX19_01775: MPMX19_01775 - Acetolactate synthase isozyme 3 small subunit, at 1,862,335 to 1,862,841
_01775
MPMX19_01776: MPMX19_01776 - Acetolactate synthase isozyme 3 large subunit, at 1,862,878 to 1,864,641
_01776
Position (kb)
1861
1862
1863 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1860.337 kb on + strand at 1860.337 kb on + strand at 1860.349 kb on + strand at 1860.349 kb on + strand at 1860.349 kb on + strand at 1860.349 kb on + strand at 1860.349 kb on + strand at 1860.350 kb on - strand at 1860.350 kb on - strand at 1860.350 kb on - strand at 1860.350 kb on - strand at 1860.350 kb on - strand at 1860.350 kb on - strand at 1860.581 kb on + strand, within MPMX19_01773 at 1860.581 kb on + strand, within MPMX19_01773 at 1860.581 kb on + strand, within MPMX19_01773 at 1860.581 kb on + strand, within MPMX19_01773 at 1860.582 kb on - strand, within MPMX19_01773 at 1860.582 kb on - strand, within MPMX19_01773 at 1860.582 kb on - strand, within MPMX19_01773 at 1860.582 kb on - strand, within MPMX19_01773 at 1860.584 kb on + strand, within MPMX19_01773 at 1860.710 kb on + strand, within MPMX19_01773 at 1860.710 kb on + strand, within MPMX19_01773 at 1860.710 kb on + strand, within MPMX19_01773 at 1860.710 kb on + strand, within MPMX19_01773 at 1860.710 kb on + strand, within MPMX19_01773 at 1860.710 kb on + strand, within MPMX19_01773 at 1860.710 kb on + strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1860.711 kb on - strand, within MPMX19_01773 at 1862.336 kb on + strand at 1862.337 kb on - strand at 1862.337 kb on - strand at 1862.337 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,860,337 + +0.2 1,860,337 + +1.1 1,860,349 + -1.7 1,860,349 + +0.7 1,860,349 + -1.8 1,860,349 + -1.1 1,860,349 + -0.0 1,860,350 - -0.6 1,860,350 - -0.6 1,860,350 - +0.2 1,860,350 - -0.2 1,860,350 - -1.9 1,860,350 - -0.4 1,860,581 + MPMX19_01773 0.32 -0.5 1,860,581 + MPMX19_01773 0.32 -0.8 1,860,581 + MPMX19_01773 0.32 -0.8 1,860,581 + MPMX19_01773 0.32 -0.3 1,860,582 - MPMX19_01773 0.33 -1.7 1,860,582 - MPMX19_01773 0.33 -1.4 1,860,582 - MPMX19_01773 0.33 +0.4 1,860,582 - MPMX19_01773 0.33 -0.3 1,860,584 + MPMX19_01773 0.33 -0.2 1,860,710 + MPMX19_01773 0.50 -0.2 1,860,710 + MPMX19_01773 0.50 +2.1 1,860,710 + MPMX19_01773 0.50 -1.3 1,860,710 + MPMX19_01773 0.50 -0.2 1,860,710 + MPMX19_01773 0.50 -1.2 1,860,710 + MPMX19_01773 0.50 -0.4 1,860,710 + MPMX19_01773 0.50 +0.2 1,860,711 - MPMX19_01773 0.50 -1.0 1,860,711 - MPMX19_01773 0.50 -0.6 1,860,711 - MPMX19_01773 0.50 +0.1 1,860,711 - MPMX19_01773 0.50 -0.1 1,860,711 - MPMX19_01773 0.50 -1.9 1,860,711 - MPMX19_01773 0.50 -1.1 1,860,711 - MPMX19_01773 0.50 -0.7 1,860,711 - MPMX19_01773 0.50 +0.2 1,860,711 - MPMX19_01773 0.50 +2.1 1,862,336 + -0.9 1,862,337 - -2.0 1,862,337 - -0.4 1,862,337 - -0.6
Or see this region's nucleotide sequence