Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01738

Experiment: MGL

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX19_01735 and MPMX19_01736 are separated by 9 nucleotidesMPMX19_01736 and MPMX19_01737 are separated by 2 nucleotidesMPMX19_01737 and MPMX19_01738 are separated by 18 nucleotidesMPMX19_01738 and MPMX19_01739 are separated by 118 nucleotides MPMX19_01735: MPMX19_01735 - NADH-quinone oxidoreductase subunit L, at 1,827,025 to 1,829,139 _01735 MPMX19_01736: MPMX19_01736 - NADH-quinone oxidoreductase subunit K, at 1,829,149 to 1,829,457 _01736 MPMX19_01737: MPMX19_01737 - NADH-quinone oxidoreductase subunit J, at 1,829,460 to 1,830,074 _01737 MPMX19_01738: MPMX19_01738 - NADH-quinone oxidoreductase subunit I, at 1,830,093 to 1,830,581 _01738 MPMX19_01739: MPMX19_01739 - NADH-quinone oxidoreductase subunit H, at 1,830,700 to 1,831,710 _01739 Position (kb) 1830 1831Strain fitness (log2 ratio) -1 0 1 2at 1830.101 kb on - strandat 1830.702 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction MGL
remove
1,830,101 - +0.8
1,830,702 - +2.4

Or see this region's nucleotide sequence