Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01655

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_01653 and MPMX19_01654 overlap by 4 nucleotidesMPMX19_01654 and MPMX19_01655 are separated by 45 nucleotidesMPMX19_01655 and MPMX19_01656 are separated by 189 nucleotidesMPMX19_01656 and MPMX19_01657 are separated by 62 nucleotides MPMX19_01653: MPMX19_01653 - Serine acetyltransferase, at 1,736,224 to 1,737,009 _01653 MPMX19_01654: MPMX19_01654 - HTH-type transcriptional regulator IscR, at 1,737,006 to 1,737,491 _01654 MPMX19_01655: MPMX19_01655 - Cysteine desulfurase NifS, at 1,737,537 to 1,738,688 _01655 MPMX19_01656: MPMX19_01656 - Co-chaperone protein HscB, at 1,738,878 to 1,739,573 _01656 MPMX19_01657: MPMX19_01657 - Ferredoxin-6, at 1,739,636 to 1,739,965 _01657 Position (kb) 1737 1738 1739Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.560 kb on + strand, within MPMX19_01653at 1736.803 kb on + strand, within MPMX19_01653at 1736.803 kb on + strand, within MPMX19_01653at 1736.803 kb on + strand, within MPMX19_01653at 1736.803 kb on + strand, within MPMX19_01653at 1736.803 kb on + strand, within MPMX19_01653at 1736.804 kb on - strand, within MPMX19_01653at 1736.937 kb on + strandat 1736.937 kb on + strandat 1736.937 kb on + strandat 1736.937 kb on + strandat 1736.937 kb on + strandat 1736.938 kb on - strandat 1736.938 kb on - strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.030 kb on + strandat 1737.126 kb on + strand, within MPMX19_01654at 1737.126 kb on + strand, within MPMX19_01654at 1737.126 kb on + strand, within MPMX19_01654at 1737.126 kb on + strand, within MPMX19_01654at 1737.198 kb on + strand, within MPMX19_01654at 1737.198 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.368 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.372 kb on + strand, within MPMX19_01654at 1737.561 kb on + strandat 1737.561 kb on + strandat 1737.561 kb on + strandat 1737.591 kb on + strandat 1738.779 kb on + strandat 1738.779 kb on + strandat 1738.779 kb on + strandat 1738.779 kb on + strandat 1738.839 kb on + strandat 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.089 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.217 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.412 kb on + strand, within MPMX19_01656at 1739.587 kb on + strandat 1739.618 kb on + strandat 1739.618 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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1,736,560 + MPMX19_01653 0.43 -1.5
1,736,560 + MPMX19_01653 0.43 +1.4
1,736,560 + MPMX19_01653 0.43 -0.6
1,736,560 + MPMX19_01653 0.43 -1.4
1,736,560 + MPMX19_01653 0.43 +0.1
1,736,560 + MPMX19_01653 0.43 +0.1
1,736,560 + MPMX19_01653 0.43 -2.4
1,736,560 + MPMX19_01653 0.43 -0.0
1,736,560 + MPMX19_01653 0.43 +0.1
1,736,560 + MPMX19_01653 0.43 -1.3
1,736,560 + MPMX19_01653 0.43 -1.5
1,736,560 + MPMX19_01653 0.43 -0.5
1,736,560 + MPMX19_01653 0.43 +0.7
1,736,560 + MPMX19_01653 0.43 -0.9
1,736,560 + MPMX19_01653 0.43 +0.4
1,736,560 + MPMX19_01653 0.43 +0.7
1,736,560 + MPMX19_01653 0.43 -1.2
1,736,560 + MPMX19_01653 0.43 -1.6
1,736,560 + MPMX19_01653 0.43 -0.4
1,736,560 + MPMX19_01653 0.43 -0.8
1,736,560 + MPMX19_01653 0.43 -0.2
1,736,560 + MPMX19_01653 0.43 +0.7
1,736,560 + MPMX19_01653 0.43 -0.7
1,736,560 + MPMX19_01653 0.43 +0.4
1,736,803 + MPMX19_01653 0.74 +0.4
1,736,803 + MPMX19_01653 0.74 +0.8
1,736,803 + MPMX19_01653 0.74 -0.8
1,736,803 + MPMX19_01653 0.74 +0.4
1,736,803 + MPMX19_01653 0.74 -1.4
1,736,804 - MPMX19_01653 0.74 +0.4
1,736,937 + -1.6
1,736,937 + +1.0
1,736,937 + +1.7
1,736,937 + -0.4
1,736,937 + -1.9
1,736,938 - -0.9
1,736,938 - -0.2
1,737,030 + +0.8
1,737,030 + -0.3
1,737,030 + -0.7
1,737,030 + -1.1
1,737,030 + -1.4
1,737,030 + +0.1
1,737,030 + -1.3
1,737,030 + +2.4
1,737,030 + +0.4
1,737,030 + -0.3
1,737,030 + -1.5
1,737,030 + -0.3
1,737,030 + -0.3
1,737,030 + -0.4
1,737,030 + -1.8
1,737,030 + +1.4
1,737,030 + -1.2
1,737,030 + +0.8
1,737,126 + MPMX19_01654 0.25 -1.1
1,737,126 + MPMX19_01654 0.25 -2.5
1,737,126 + MPMX19_01654 0.25 -1.6
1,737,126 + MPMX19_01654 0.25 +0.7
1,737,198 + MPMX19_01654 0.40 -0.4
1,737,198 + MPMX19_01654 0.40 -1.1
1,737,368 + MPMX19_01654 0.74 -0.6
1,737,368 + MPMX19_01654 0.74 +0.4
1,737,368 + MPMX19_01654 0.74 -2.0
1,737,368 + MPMX19_01654 0.74 +0.8
1,737,368 + MPMX19_01654 0.74 -0.2
1,737,368 + MPMX19_01654 0.74 -1.3
1,737,368 + MPMX19_01654 0.74 -1.4
1,737,368 + MPMX19_01654 0.74 -0.6
1,737,368 + MPMX19_01654 0.74 -0.9
1,737,368 + MPMX19_01654 0.74 +0.2
1,737,368 + MPMX19_01654 0.74 -0.4
1,737,368 + MPMX19_01654 0.74 -3.0
1,737,368 + MPMX19_01654 0.74 +1.4
1,737,368 + MPMX19_01654 0.74 -1.4
1,737,368 + MPMX19_01654 0.74 -0.2
1,737,368 + MPMX19_01654 0.74 -0.1
1,737,368 + MPMX19_01654 0.74 -1.1
1,737,368 + MPMX19_01654 0.74 +0.2
1,737,368 + MPMX19_01654 0.74 -0.3
1,737,368 + MPMX19_01654 0.74 +1.4
1,737,368 + MPMX19_01654 0.74 -1.0
1,737,368 + MPMX19_01654 0.74 -0.4
1,737,368 + MPMX19_01654 0.74 -0.9
1,737,368 + MPMX19_01654 0.74 -1.2
1,737,368 + MPMX19_01654 0.74 -0.8
1,737,368 + MPMX19_01654 0.74 +0.1
1,737,368 + MPMX19_01654 0.74 -1.6
1,737,368 + MPMX19_01654 0.74 -1.4
1,737,368 + MPMX19_01654 0.74 +0.2
1,737,368 + MPMX19_01654 0.74 -0.5
1,737,368 + MPMX19_01654 0.74 +2.4
1,737,368 + MPMX19_01654 0.74 -2.0
1,737,368 + MPMX19_01654 0.74 +0.4
1,737,368 + MPMX19_01654 0.74 -0.6
1,737,368 + MPMX19_01654 0.74 -1.2
1,737,368 + MPMX19_01654 0.74 +0.6
1,737,368 + MPMX19_01654 0.74 -0.9
1,737,368 + MPMX19_01654 0.74 -1.0
1,737,368 + MPMX19_01654 0.74 -2.1
1,737,368 + MPMX19_01654 0.74 -1.4
1,737,372 + MPMX19_01654 0.75 -1.4
1,737,372 + MPMX19_01654 0.75 -0.9
1,737,372 + MPMX19_01654 0.75 +0.4
1,737,372 + MPMX19_01654 0.75 +0.6
1,737,372 + MPMX19_01654 0.75 +0.4
1,737,372 + MPMX19_01654 0.75 -0.4
1,737,372 + MPMX19_01654 0.75 -1.4
1,737,372 + MPMX19_01654 0.75 -0.5
1,737,372 + MPMX19_01654 0.75 +0.7
1,737,372 + MPMX19_01654 0.75 -1.4
1,737,372 + MPMX19_01654 0.75 -0.2
1,737,372 + MPMX19_01654 0.75 -2.4
1,737,372 + MPMX19_01654 0.75 -1.3
1,737,372 + MPMX19_01654 0.75 +0.8
1,737,372 + MPMX19_01654 0.75 -0.8
1,737,372 + MPMX19_01654 0.75 -1.8
1,737,372 + MPMX19_01654 0.75 -0.4
1,737,372 + MPMX19_01654 0.75 -0.5
1,737,372 + MPMX19_01654 0.75 -0.8
1,737,372 + MPMX19_01654 0.75 +0.2
1,737,372 + MPMX19_01654 0.75 -0.9
1,737,372 + MPMX19_01654 0.75 +0.2
1,737,372 + MPMX19_01654 0.75 +0.9
1,737,372 + MPMX19_01654 0.75 -0.7
1,737,372 + MPMX19_01654 0.75 -0.4
1,737,372 + MPMX19_01654 0.75 -0.4
1,737,372 + MPMX19_01654 0.75 -0.5
1,737,372 + MPMX19_01654 0.75 -0.4
1,737,372 + MPMX19_01654 0.75 -2.1
1,737,372 + MPMX19_01654 0.75 -1.4
1,737,372 + MPMX19_01654 0.75 -0.0
1,737,372 + MPMX19_01654 0.75 -1.7
1,737,372 + MPMX19_01654 0.75 -0.9
1,737,372 + MPMX19_01654 0.75 +0.8
1,737,372 + MPMX19_01654 0.75 -1.5
1,737,372 + MPMX19_01654 0.75 -1.4
1,737,372 + MPMX19_01654 0.75 -0.8
1,737,372 + MPMX19_01654 0.75 +0.8
1,737,561 + -1.6
1,737,561 + -0.8
1,737,561 + +0.7
1,737,591 + +0.2
1,738,779 + +0.5
1,738,779 + -0.7
1,738,779 + -1.3
1,738,779 + -1.0
1,738,839 + -1.2
1,739,089 + MPMX19_01656 0.30 -0.7
1,739,089 + MPMX19_01656 0.30 -1.2
1,739,089 + MPMX19_01656 0.30 -0.7
1,739,089 + MPMX19_01656 0.30 -1.7
1,739,089 + MPMX19_01656 0.30 -0.8
1,739,089 + MPMX19_01656 0.30 -0.5
1,739,089 + MPMX19_01656 0.30 -0.1
1,739,089 + MPMX19_01656 0.30 +0.4
1,739,089 + MPMX19_01656 0.30 +0.4
1,739,089 + MPMX19_01656 0.30 -0.5
1,739,089 + MPMX19_01656 0.30 -2.3
1,739,089 + MPMX19_01656 0.30 -1.7
1,739,089 + MPMX19_01656 0.30 -1.4
1,739,089 + MPMX19_01656 0.30 -0.5
1,739,089 + MPMX19_01656 0.30 -1.4
1,739,089 + MPMX19_01656 0.30 -2.1
1,739,217 + MPMX19_01656 0.49 -0.4
1,739,217 + MPMX19_01656 0.49 -0.5
1,739,217 + MPMX19_01656 0.49 -0.8
1,739,217 + MPMX19_01656 0.49 -0.4
1,739,217 + MPMX19_01656 0.49 -0.1
1,739,217 + MPMX19_01656 0.49 -0.2
1,739,217 + MPMX19_01656 0.49 -1.7
1,739,217 + MPMX19_01656 0.49 -0.8
1,739,217 + MPMX19_01656 0.49 -2.3
1,739,217 + MPMX19_01656 0.49 +0.8
1,739,412 + MPMX19_01656 0.77 -1.1
1,739,412 + MPMX19_01656 0.77 -1.3
1,739,412 + MPMX19_01656 0.77 -0.6
1,739,412 + MPMX19_01656 0.77 +0.1
1,739,412 + MPMX19_01656 0.77 -2.5
1,739,412 + MPMX19_01656 0.77 -0.2
1,739,412 + MPMX19_01656 0.77 -1.7
1,739,412 + MPMX19_01656 0.77 +0.8
1,739,412 + MPMX19_01656 0.77 -1.1
1,739,412 + MPMX19_01656 0.77 -1.3
1,739,587 + -2.3
1,739,618 + -0.8
1,739,618 + -2.5

Or see this region's nucleotide sequence