Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01620 and MPMX19_01621 are separated by 124 nucleotides MPMX19_01621 and MPMX19_01622 are separated by 146 nucleotides MPMX19_01622 and MPMX19_01623 are separated by 98 nucleotides
MPMX19_01620: MPMX19_01620 - hypothetical protein, at 1,699,690 to 1,699,926
_01620
MPMX19_01621: MPMX19_01621 - hypothetical protein, at 1,700,051 to 1,700,662
_01621
MPMX19_01622: MPMX19_01622 - hypothetical protein, at 1,700,809 to 1,701,246
_01622
MPMX19_01623: MPMX19_01623 - Trehalose synthase/amylase TreS, at 1,701,345 to 1,703,030
_01623
Position (kb) 1700
1701
1702 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1700.027 kb on - strand at 1700.037 kb on + strand at 1700.038 kb on - strand at 1700.055 kb on + strand at 1700.055 kb on + strand at 1700.130 kb on + strand, within MPMX19_01621 at 1700.130 kb on + strand, within MPMX19_01621 at 1700.130 kb on + strand, within MPMX19_01621 at 1700.131 kb on - strand, within MPMX19_01621 at 1700.307 kb on + strand, within MPMX19_01621 at 1700.307 kb on + strand, within MPMX19_01621 at 1700.307 kb on + strand, within MPMX19_01621 at 1700.307 kb on + strand, within MPMX19_01621 at 1700.307 kb on + strand, within MPMX19_01621 at 1700.307 kb on + strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.308 kb on - strand, within MPMX19_01621 at 1700.388 kb on + strand, within MPMX19_01621 at 1700.388 kb on + strand, within MPMX19_01621 at 1700.388 kb on + strand, within MPMX19_01621 at 1700.388 kb on + strand, within MPMX19_01621 at 1700.389 kb on - strand, within MPMX19_01621 at 1700.389 kb on - strand, within MPMX19_01621 at 1700.389 kb on - strand, within MPMX19_01621 at 1700.762 kb on - strand at 1700.762 kb on - strand at 1700.875 kb on + strand, within MPMX19_01622 at 1700.875 kb on + strand, within MPMX19_01622 at 1700.875 kb on + strand, within MPMX19_01622 at 1700.876 kb on - strand, within MPMX19_01622 at 1700.876 kb on - strand, within MPMX19_01622 at 1700.876 kb on - strand, within MPMX19_01622 at 1700.876 kb on - strand, within MPMX19_01622 at 1700.876 kb on - strand, within MPMX19_01622 at 1700.876 kb on - strand, within MPMX19_01622 at 1700.876 kb on - strand, within MPMX19_01622 at 1701.097 kb on + strand, within MPMX19_01622 at 1701.097 kb on + strand, within MPMX19_01622 at 1701.098 kb on - strand, within MPMX19_01622 at 1701.098 kb on - strand, within MPMX19_01622 at 1701.098 kb on - strand, within MPMX19_01622 at 1701.098 kb on - strand, within MPMX19_01622 at 1701.199 kb on + strand, within MPMX19_01622 at 1701.199 kb on + strand, within MPMX19_01622 at 1701.199 kb on + strand, within MPMX19_01622 at 1701.199 kb on + strand, within MPMX19_01622 at 1701.199 kb on + strand, within MPMX19_01622 at 1701.200 kb on - strand, within MPMX19_01622 at 1701.200 kb on - strand, within MPMX19_01622 at 1701.245 kb on - strand at 1701.245 kb on - strand at 1701.245 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.307 kb on - strand at 1701.328 kb on + strand at 1701.328 kb on + strand at 1701.328 kb on + strand at 1701.328 kb on + strand at 1701.328 kb on + strand at 1701.328 kb on + strand at 1701.328 kb on + strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.329 kb on - strand at 1701.346 kb on + strand at 1701.346 kb on + strand at 1701.346 kb on + strand at 1701.346 kb on + strand at 1701.347 kb on - strand at 1701.347 kb on - strand at 1701.347 kb on - strand at 1701.347 kb on - strand at 1701.347 kb on - strand at 1701.347 kb on - strand at 1701.347 kb on - strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.394 kb on + strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.395 kb on - strand at 1701.424 kb on + strand at 1701.430 kb on + strand at 1701.430 kb on + strand at 1701.430 kb on + strand at 1701.430 kb on + strand at 1701.430 kb on + strand at 1701.430 kb on + strand at 1701.431 kb on + strand at 1701.431 kb on - strand at 1701.431 kb on - strand at 1701.431 kb on - strand at 1701.601 kb on + strand, within MPMX19_01623 at 1701.601 kb on + strand, within MPMX19_01623 at 1701.601 kb on + strand, within MPMX19_01623 at 1701.602 kb on - strand, within MPMX19_01623 at 1701.757 kb on + strand, within MPMX19_01623 at 1701.757 kb on + strand, within MPMX19_01623 at 1701.757 kb on + strand, within MPMX19_01623 at 1701.757 kb on + strand, within MPMX19_01623 at 1701.758 kb on - strand, within MPMX19_01623 at 1701.758 kb on - strand, within MPMX19_01623 at 1701.758 kb on - strand, within MPMX19_01623 at 1701.907 kb on + strand, within MPMX19_01623 at 1701.907 kb on + strand, within MPMX19_01623 at 1701.908 kb on - strand, within MPMX19_01623 at 1701.947 kb on + strand, within MPMX19_01623 at 1701.947 kb on + strand, within MPMX19_01623 at 1701.947 kb on + strand, within MPMX19_01623 at 1701.947 kb on + strand, within MPMX19_01623 at 1701.947 kb on + strand, within MPMX19_01623 at 1701.948 kb on - strand, within MPMX19_01623 at 1701.948 kb on - strand, within MPMX19_01623 at 1701.948 kb on - strand, within MPMX19_01623 at 1701.948 kb on - strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.949 kb on + strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1701.950 kb on - strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.018 kb on + strand, within MPMX19_01623 at 1702.019 kb on - strand, within MPMX19_01623 at 1702.019 kb on - strand, within MPMX19_01623 at 1702.019 kb on - strand, within MPMX19_01623 at 1702.019 kb on - strand, within MPMX19_01623 at 1702.019 kb on - strand, within MPMX19_01623 at 1702.019 kb on - strand, within MPMX19_01623 at 1702.019 kb on - strand, within MPMX19_01623 at 1702.019 kb on - strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.204 kb on + strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623 at 1702.205 kb on - strand, within MPMX19_01623
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,700,027 - -0.1 1,700,037 + +0.4 1,700,038 - -0.4 1,700,055 + -0.8 1,700,055 + -0.3 1,700,130 + MPMX19_01621 0.13 +1.0 1,700,130 + MPMX19_01621 0.13 -1.7 1,700,130 + MPMX19_01621 0.13 +1.8 1,700,131 - MPMX19_01621 0.13 -1.1 1,700,307 + MPMX19_01621 0.42 -0.8 1,700,307 + MPMX19_01621 0.42 +0.5 1,700,307 + MPMX19_01621 0.42 +1.1 1,700,307 + MPMX19_01621 0.42 -1.8 1,700,307 + MPMX19_01621 0.42 +0.8 1,700,307 + MPMX19_01621 0.42 -0.3 1,700,308 - MPMX19_01621 0.42 -2.1 1,700,308 - MPMX19_01621 0.42 -1.3 1,700,308 - MPMX19_01621 0.42 +0.6 1,700,308 - MPMX19_01621 0.42 -1.9 1,700,308 - MPMX19_01621 0.42 -1.1 1,700,308 - MPMX19_01621 0.42 -0.1 1,700,308 - MPMX19_01621 0.42 -0.9 1,700,308 - MPMX19_01621 0.42 +0.8 1,700,308 - MPMX19_01621 0.42 -0.6 1,700,308 - MPMX19_01621 0.42 -2.7 1,700,308 - MPMX19_01621 0.42 -0.8 1,700,388 + MPMX19_01621 0.55 +1.0 1,700,388 + MPMX19_01621 0.55 -2.0 1,700,388 + MPMX19_01621 0.55 -0.8 1,700,388 + MPMX19_01621 0.55 +0.8 1,700,389 - MPMX19_01621 0.55 -1.4 1,700,389 - MPMX19_01621 0.55 -1.2 1,700,389 - MPMX19_01621 0.55 -0.6 1,700,762 - -0.9 1,700,762 - -0.8 1,700,875 + MPMX19_01622 0.15 -0.3 1,700,875 + MPMX19_01622 0.15 +0.1 1,700,875 + MPMX19_01622 0.15 +0.3 1,700,876 - MPMX19_01622 0.15 -1.1 1,700,876 - MPMX19_01622 0.15 +0.3 1,700,876 - MPMX19_01622 0.15 -0.4 1,700,876 - MPMX19_01622 0.15 -0.0 1,700,876 - MPMX19_01622 0.15 -1.5 1,700,876 - MPMX19_01622 0.15 +1.4 1,700,876 - MPMX19_01622 0.15 -2.0 1,701,097 + MPMX19_01622 0.66 -0.9 1,701,097 + MPMX19_01622 0.66 -0.2 1,701,098 - MPMX19_01622 0.66 -0.4 1,701,098 - MPMX19_01622 0.66 +1.2 1,701,098 - MPMX19_01622 0.66 +1.6 1,701,098 - MPMX19_01622 0.66 +0.1 1,701,199 + MPMX19_01622 0.89 -0.1 1,701,199 + MPMX19_01622 0.89 -0.5 1,701,199 + MPMX19_01622 0.89 -0.8 1,701,199 + MPMX19_01622 0.89 -0.5 1,701,199 + MPMX19_01622 0.89 -0.6 1,701,200 - MPMX19_01622 0.89 +0.6 1,701,200 - MPMX19_01622 0.89 +0.2 1,701,245 - -0.9 1,701,245 - -0.1 1,701,245 - -1.6 1,701,307 - -1.7 1,701,307 - -1.1 1,701,307 - -1.8 1,701,307 - -1.4 1,701,307 - -1.9 1,701,307 - +1.4 1,701,307 - -0.7 1,701,307 - -2.2 1,701,307 - -0.1 1,701,307 - +0.5 1,701,307 - -1.4 1,701,307 - -0.6 1,701,307 - -1.3 1,701,328 + +0.2 1,701,328 + -0.6 1,701,328 + -0.0 1,701,328 + +0.4 1,701,328 + -0.1 1,701,328 + +2.0 1,701,328 + -1.3 1,701,329 - -0.9 1,701,329 - -0.4 1,701,329 - -0.8 1,701,329 - -1.2 1,701,329 - +0.4 1,701,329 - +0.5 1,701,329 - +0.2 1,701,329 - -0.3 1,701,329 - +0.4 1,701,329 - -0.7 1,701,329 - -0.5 1,701,329 - -1.6 1,701,346 + +0.2 1,701,346 + +0.7 1,701,346 + -0.2 1,701,346 + -0.0 1,701,347 - -2.3 1,701,347 - -3.0 1,701,347 - -2.1 1,701,347 - -0.6 1,701,347 - -0.1 1,701,347 - -1.8 1,701,347 - -1.9 1,701,394 + -2.0 1,701,394 + +1.4 1,701,394 + -1.0 1,701,394 + -1.1 1,701,394 + +0.3 1,701,394 + +1.2 1,701,394 + -2.2 1,701,394 + +0.2 1,701,394 + +0.3 1,701,394 + -1.3 1,701,394 + -0.6 1,701,394 + -1.0 1,701,394 + -2.6 1,701,395 - -0.5 1,701,395 - -0.2 1,701,395 - -0.2 1,701,395 - -1.9 1,701,395 - +0.3 1,701,395 - -2.7 1,701,395 - -0.3 1,701,395 - -2.0 1,701,395 - -2.5 1,701,395 - -1.7 1,701,395 - -0.8 1,701,395 - -0.2 1,701,424 + -0.2 1,701,430 + +1.4 1,701,430 + +0.8 1,701,430 + -1.4 1,701,430 + -1.3 1,701,430 + -0.9 1,701,430 + -1.9 1,701,431 + -0.8 1,701,431 - -1.1 1,701,431 - -1.1 1,701,431 - -0.7 1,701,601 + MPMX19_01623 0.15 +0.1 1,701,601 + MPMX19_01623 0.15 -2.2 1,701,601 + MPMX19_01623 0.15 -0.4 1,701,602 - MPMX19_01623 0.15 -0.2 1,701,757 + MPMX19_01623 0.24 +0.8 1,701,757 + MPMX19_01623 0.24 -1.2 1,701,757 + MPMX19_01623 0.24 -1.9 1,701,757 + MPMX19_01623 0.24 -0.5 1,701,758 - MPMX19_01623 0.24 -2.5 1,701,758 - MPMX19_01623 0.24 -1.5 1,701,758 - MPMX19_01623 0.24 -2.3 1,701,907 + MPMX19_01623 0.33 -1.4 1,701,907 + MPMX19_01623 0.33 +0.6 1,701,908 - MPMX19_01623 0.33 -0.6 1,701,947 + MPMX19_01623 0.36 -1.2 1,701,947 + MPMX19_01623 0.36 -0.2 1,701,947 + MPMX19_01623 0.36 -1.2 1,701,947 + MPMX19_01623 0.36 -0.6 1,701,947 + MPMX19_01623 0.36 -0.4 1,701,948 - MPMX19_01623 0.36 -1.8 1,701,948 - MPMX19_01623 0.36 -1.5 1,701,948 - MPMX19_01623 0.36 +1.4 1,701,948 - MPMX19_01623 0.36 +1.4 1,701,949 + MPMX19_01623 0.36 -1.7 1,701,949 + MPMX19_01623 0.36 -1.1 1,701,949 + MPMX19_01623 0.36 -0.2 1,701,949 + MPMX19_01623 0.36 -0.6 1,701,949 + MPMX19_01623 0.36 -2.0 1,701,949 + MPMX19_01623 0.36 -0.2 1,701,949 + MPMX19_01623 0.36 -0.0 1,701,949 + MPMX19_01623 0.36 +0.7 1,701,949 + MPMX19_01623 0.36 -0.8 1,701,949 + MPMX19_01623 0.36 +0.8 1,701,949 + MPMX19_01623 0.36 -0.4 1,701,949 + MPMX19_01623 0.36 -1.1 1,701,949 + MPMX19_01623 0.36 -1.5 1,701,949 + MPMX19_01623 0.36 +0.6 1,701,949 + MPMX19_01623 0.36 -2.4 1,701,949 + MPMX19_01623 0.36 -0.4 1,701,949 + MPMX19_01623 0.36 -0.3 1,701,949 + MPMX19_01623 0.36 -1.1 1,701,949 + MPMX19_01623 0.36 +0.3 1,701,950 - MPMX19_01623 0.36 -0.1 1,701,950 - MPMX19_01623 0.36 -0.0 1,701,950 - MPMX19_01623 0.36 -1.3 1,701,950 - MPMX19_01623 0.36 +0.9 1,701,950 - MPMX19_01623 0.36 -0.3 1,701,950 - MPMX19_01623 0.36 +1.4 1,701,950 - MPMX19_01623 0.36 +0.1 1,701,950 - MPMX19_01623 0.36 -1.2 1,701,950 - MPMX19_01623 0.36 -0.3 1,701,950 - MPMX19_01623 0.36 +0.7 1,701,950 - MPMX19_01623 0.36 -2.1 1,701,950 - MPMX19_01623 0.36 -0.3 1,701,950 - MPMX19_01623 0.36 -0.1 1,701,950 - MPMX19_01623 0.36 +0.8 1,701,950 - MPMX19_01623 0.36 +0.8 1,701,950 - MPMX19_01623 0.36 -0.1 1,701,950 - MPMX19_01623 0.36 -0.6 1,701,950 - MPMX19_01623 0.36 -1.1 1,702,018 + MPMX19_01623 0.40 -0.3 1,702,018 + MPMX19_01623 0.40 -1.5 1,702,018 + MPMX19_01623 0.40 +0.8 1,702,018 + MPMX19_01623 0.40 +0.9 1,702,018 + MPMX19_01623 0.40 +0.8 1,702,018 + MPMX19_01623 0.40 +0.1 1,702,018 + MPMX19_01623 0.40 -1.5 1,702,018 + MPMX19_01623 0.40 -0.5 1,702,018 + MPMX19_01623 0.40 +0.1 1,702,018 + MPMX19_01623 0.40 -0.8 1,702,019 - MPMX19_01623 0.40 -1.4 1,702,019 - MPMX19_01623 0.40 -0.1 1,702,019 - MPMX19_01623 0.40 +0.1 1,702,019 - MPMX19_01623 0.40 -0.3 1,702,019 - MPMX19_01623 0.40 -0.2 1,702,019 - MPMX19_01623 0.40 +1.1 1,702,019 - MPMX19_01623 0.40 -1.5 1,702,019 - MPMX19_01623 0.40 +1.1 1,702,204 + MPMX19_01623 0.51 +0.4 1,702,204 + MPMX19_01623 0.51 -0.9 1,702,204 + MPMX19_01623 0.51 -0.3 1,702,204 + MPMX19_01623 0.51 +0.1 1,702,204 + MPMX19_01623 0.51 -0.2 1,702,204 + MPMX19_01623 0.51 -0.8 1,702,204 + MPMX19_01623 0.51 +0.4 1,702,204 + MPMX19_01623 0.51 -0.4 1,702,204 + MPMX19_01623 0.51 -0.9 1,702,205 - MPMX19_01623 0.51 -1.8 1,702,205 - MPMX19_01623 0.51 -1.3 1,702,205 - MPMX19_01623 0.51 +1.5 1,702,205 - MPMX19_01623 0.51 -2.0 1,702,205 - MPMX19_01623 0.51 -0.9 1,702,205 - MPMX19_01623 0.51 -0.7 1,702,205 - MPMX19_01623 0.51 -0.1 1,702,205 - MPMX19_01623 0.51 -0.3 1,702,205 - MPMX19_01623 0.51 +1.1
Or see this region's nucleotide sequence