Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01396

Experiment: MGL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	MGL
				remove
1,460,764	+			-0.0
1,460,764	+			+0.3
1,460,765	-			-0.7
1,460,765	-			+0.3
1,460,765	-			+1.0
1,460,788	+			+1.7
1,460,788	+			+0.7
1,460,788	+			-0.7
1,460,789	-			-1.3
1,460,789	-			-0.9
1,460,801	+			-0.7
1,460,801	+			-0.3
1,460,801	+			-2.2
1,460,802	-			-1.3
1,460,822	-			-1.3
1,460,850	+			+0.1
1,460,851	-			-0.5
1,460,897	+			-0.0
1,460,897	+			+0.6
1,460,897	+			-0.0
1,460,897	+			+1.1
1,460,897	+			-1.1
1,460,897	+			-0.7
1,460,897	+			-1.9
1,460,897	+			-2.0
1,460,897	+			-1.2
1,460,897	+			-1.4
1,460,897	+			-1.9
1,460,897	+			-0.8
1,460,898	-			-0.4
1,460,898	-			-0.9
1,460,898	-			-0.4
1,460,898	-			+0.8
1,460,898	-			-1.9
1,460,898	-			-1.3
1,460,898	-			+0.7
1,460,898	-			-0.3
1,460,898	-			-2.9
1,461,245	+	MPMX19_01395	0.50	-1.2
1,461,393	-	MPMX19_01395	0.71	+0.4
1,461,429	+	MPMX19_01395	0.76	-1.2
1,461,429	+	MPMX19_01395	0.76	-0.2
1,461,625	+			+0.7
1,461,625	+			-0.7
1,461,625	+			-1.2
1,461,625	+			-0.3
1,461,625	+			+0.7
1,461,625	+			-0.7
1,461,625	+			-1.7
1,461,625	+			-2.1
1,461,625	+			-0.3
1,461,625	+			-0.3
1,461,625	+			-0.3
1,461,625	+			-0.9
1,461,625	+			-1.2
1,461,626	-			-1.3
1,461,626	-			-1.0
1,461,626	-			+0.5
1,461,626	-			-0.0
1,461,626	-			+0.1
1,461,626	-			-1.2
1,461,626	-			-2.8
1,461,626	-			-0.7
1,461,626	-			-1.6
1,461,626	-			+0.6
1,461,626	-			-0.5
1,461,626	-			-0.3
1,461,626	-			-1.0
1,461,627	+			-1.9
1,461,627	+			+0.3
1,461,627	+			-1.2
1,461,627	+			-0.5
1,461,627	+			+0.7
1,461,627	+			-1.6
1,461,627	+			+0.8
1,461,627	+			-0.9
1,461,627	+			+0.7
1,461,627	+			-0.0
1,461,627	+			+0.5
1,461,627	+			-1.0
1,461,627	+			-1.4
1,461,627	+			-0.0
1,461,627	+			-2.8
1,461,627	+			-0.5
1,461,627	+			+0.1
1,461,627	+			+1.1
1,461,627	+			-1.0
1,461,627	+			-0.7
1,461,627	+			-0.3
1,461,627	+			-0.7
1,461,627	+			+0.7
1,461,627	+			-2.3
1,461,627	+			-0.5
1,461,627	+			-2.4
1,461,627	+			+0.2
1,461,627	+			-0.2
1,461,627	+			-0.3
1,461,627	+			-0.0
1,461,627	+			+0.1
1,461,627	+			-0.4
1,461,627	+			-1.6
1,461,627	+			+0.3
1,461,627	+			+0.7
1,461,627	+			-0.9
1,461,627	+			-0.8
1,461,627	+			+0.1
1,461,627	+			-0.7
1,461,627	+			-1.2
1,461,627	+			-0.3
1,461,627	+			-0.2
1,461,627	+			-1.0
1,461,627	+			-0.5
1,461,627	+			+0.8
1,461,627	+			+1.0
1,461,627	+			-0.7
1,461,627	+			-0.7
1,461,627	+			+1.5
1,461,627	+			-0.3
1,461,627	+			-2.1
1,461,627	+			+0.3
1,461,627	+			-1.6
1,461,627	+			+0.7
1,461,627	+			-1.5
1,461,627	+			-1.5
1,461,627	+			+0.3
1,461,627	+			-1.7
1,461,627	+			-0.5
1,461,627	+			-2.1
1,461,627	+			-0.2
1,461,627	+			+1.3
1,461,627	+			-0.9
1,461,627	+			-1.2
1,461,627	+			-1.2
1,461,628	-			-0.5
1,461,628	-			-0.5
1,461,628	-			-1.3
1,461,628	-			-0.0
1,461,628	-			-0.4
1,461,628	-			-0.5
1,461,628	-			-0.2
1,461,628	-			-0.7
1,461,628	-			-0.8
1,461,628	-			+0.7
1,461,628	-			+0.3
1,461,628	-			+0.1
1,461,628	-			-1.5
1,461,628	-			-0.0
1,461,628	-			-0.2
1,461,628	-			+1.0
1,461,628	-			-0.9
1,461,628	-			-0.2
1,461,628	-			-1.0
1,461,628	-			-1.7
1,461,628	-			-2.0
1,461,628	-			-0.6
1,461,628	-			-1.0
1,461,628	-			-1.7
1,461,628	-			+0.2
1,461,628	-			-1.0
1,461,628	-			-0.9
1,461,628	-			-0.9
1,461,628	-			-0.8
1,461,628	-			-0.9
1,461,628	-			-2.1
1,461,628	-			-1.6
1,461,628	-			-0.5
1,461,628	-			-1.5
1,461,628	-			-1.4
1,461,628	-			-0.5
1,461,711	+			-1.0
1,461,711	+			-0.5
1,461,711	+			-1.8
1,461,711	+			+1.3
1,461,711	+			-3.1
1,461,711	+			-0.0
1,461,712	-			-0.4
1,461,712	-			+0.7
1,461,712	-			-1.8
1,461,712	-			-1.9
1,461,712	-			-0.4
1,461,712	-			-1.3
1,461,991	-	MPMX19_01396	0.66	-0.3
1,462,160	-			-0.3
1,462,202	+			+0.7
1,462,202	+			-1.9
1,462,202	+			-0.5
1,462,202	+			+1.0
1,462,203	-			-0.6
1,462,226	+			+2.3
1,462,226	+			+2.3
1,462,227	-			-1.7
1,462,227	-			-1.6
1,462,227	-			-0.3
1,462,227	-			-1.3
1,462,227	-			+0.8
1,462,265	+	MPMX19_01397	0.11	+0.3
1,462,265	+	MPMX19_01397	0.11	-1.3
1,462,266	-	MPMX19_01397	0.11	-0.4
1,462,266	-	MPMX19_01397	0.11	-1.8
1,462,266	-	MPMX19_01397	0.11	-0.1
1,462,266	-	MPMX19_01397	0.11	-0.7
1,462,266	-	MPMX19_01397	0.11	-0.9
1,462,282	-	MPMX19_01397	0.14	-2.2
1,462,282	-	MPMX19_01397	0.14	-1.5
1,462,282	-	MPMX19_01397	0.14	-1.2
1,462,282	-	MPMX19_01397	0.14	+0.7
1,462,282	-	MPMX19_01397	0.14	-2.7
1,462,282	-	MPMX19_01397	0.14	-0.2
1,462,282	-	MPMX19_01397	0.14	-1.3
1,462,293	+	MPMX19_01397	0.15	+0.7
1,462,299	+	MPMX19_01397	0.16	+0.1
1,462,313	+	MPMX19_01397	0.18	+0.3
1,462,328	+	MPMX19_01397	0.20	+0.6
1,462,328	+	MPMX19_01397	0.20	-0.4
1,462,328	+	MPMX19_01397	0.20	-2.8
1,462,329	-	MPMX19_01397	0.20	-1.6
1,462,329	-	MPMX19_01397	0.20	-0.3
1,462,349	+	MPMX19_01397	0.23	-0.0
1,462,349	+	MPMX19_01397	0.23	+1.1
1,462,349	+	MPMX19_01397	0.23	-1.5
1,462,350	-	MPMX19_01397	0.23	-0.5
1,462,350	-	MPMX19_01397	0.23	-1.9
1,462,403	+	MPMX19_01397	0.31	-0.5
1,462,404	-	MPMX19_01397	0.31	-1.2
1,462,410	+	MPMX19_01397	0.32	-0.9
1,462,469	+	MPMX19_01397	0.41	-0.0
1,462,472	-	MPMX19_01397	0.41	-0.0
1,462,472	-	MPMX19_01397	0.41	+1.3
1,462,475	+	MPMX19_01397	0.42	+0.1
1,462,476	-	MPMX19_01397	0.42	-0.6
1,462,476	-	MPMX19_01397	0.42	-1.2
1,462,488	-	MPMX19_01397	0.44	-1.2
1,462,488	-	MPMX19_01397	0.44	+0.1
1,462,537	+	MPMX19_01397	0.51	+0.1
1,462,537	+	MPMX19_01397	0.51	-0.0
1,462,537	+	MPMX19_01397	0.51	-1.2
1,462,537	+	MPMX19_01397	0.51	-0.0
1,462,537	+	MPMX19_01397	0.51	-1.2
1,462,537	+	MPMX19_01397	0.51	-0.9
1,462,538	-	MPMX19_01397	0.51	+0.7
1,462,564	+	MPMX19_01397	0.55	-0.2
1,462,564	+	MPMX19_01397	0.55	-0.5
1,462,565	-	MPMX19_01397	0.55	+1.9
1,462,593	-	MPMX19_01397	0.59	-1.7
1,462,599	+	MPMX19_01397	0.60	-1.4
1,462,599	+	MPMX19_01397	0.60	-1.1
1,462,599	+	MPMX19_01397	0.60	-0.3
1,462,599	+	MPMX19_01397	0.60	+2.3
1,462,599	+	MPMX19_01397	0.60	-0.3
1,462,600	-	MPMX19_01397	0.60	-0.6
1,462,600	-	MPMX19_01397	0.60	+0.3
1,462,600	-	MPMX19_01397	0.60	-1.9
1,462,600	-	MPMX19_01397	0.60	+0.3
1,462,600	-	MPMX19_01397	0.60	-0.0
1,462,600	-	MPMX19_01397	0.60	-0.4
1,462,626	+	MPMX19_01397	0.64	+0.8
1,462,627	-	MPMX19_01397	0.64	-1.5
1,462,627	-	MPMX19_01397	0.64	-0.9
1,462,731	+	MPMX19_01397	0.79	-1.5
1,462,731	+	MPMX19_01397	0.79	-1.2
1,462,731	+	MPMX19_01397	0.79	+0.4
1,462,731	+	MPMX19_01397	0.79	-0.5
1,462,731	+	MPMX19_01397	0.79	-0.1
1,462,732	-	MPMX19_01397	0.79	-1.7
1,462,732	-	MPMX19_01397	0.79	-0.8
1,462,732	-	MPMX19_01397	0.79	-0.0
1,462,732	-	MPMX19_01397	0.79	-0.3
1,462,732	-	MPMX19_01397	0.79	-0.7
1,462,732	-	MPMX19_01397	0.79	-0.4
1,462,769	+	MPMX19_01397	0.84	-0.2
1,462,769	+	MPMX19_01397	0.84	-1.2
1,462,788	+	MPMX19_01397	0.87	-0.2
1,462,788	+	MPMX19_01397	0.87	-0.7
1,462,788	+	MPMX19_01397	0.87	-1.2
1,462,789	-	MPMX19_01397	0.87	-1.2
1,462,789	-	MPMX19_01397	0.87	+0.1
1,462,863	+			+0.6
1,462,865	+			+1.9
1,462,866	-			-2.6
1,462,866	-			+1.3
1,462,899	-			-0.7
1,462,920	+			+0.3
1,462,920	+			-0.2
1,462,977	+			-0.1
1,462,977	+			-0.5
1,462,978	-			+0.9
1,462,978	-			-0.9
1,462,978	-			-0.5
1,462,983	+			+0.5
1,462,983	+			-0.9
1,462,984	-			-1.4
1,462,984	-			-0.3
1,462,984	-			+0.7
1,462,984	-			+0.9
1,463,013	+			-1.0
1,463,014	-			-1.2
1,463,014	-			+0.3
1,463,014	-			-0.4
1,463,014	-			+0.7
1,463,107	+	MPMX19_01398	0.15	-1.7
1,463,115	+	MPMX19_01398	0.15	+0.9
1,463,115	+	MPMX19_01398	0.15	-0.4
1,463,115	+	MPMX19_01398	0.15	-0.7
1,463,115	+	MPMX19_01398	0.15	-1.4
1,463,115	+	MPMX19_01398	0.15	+2.3
1,463,115	+	MPMX19_01398	0.15	-0.3
1,463,115	+	MPMX19_01398	0.15	-0.0
1,463,116	-	MPMX19_01398	0.16	+0.3

Or see this region's nucleotide sequence