Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01388 and MPMX19_01389 are separated by 8 nucleotides MPMX19_01389 and MPMX19_01390 are separated by 308 nucleotides
MPMX19_01388: MPMX19_01388 - Outer membrane protein assembly factor BamB, at 1,452,801 to 1,454,168
_01388
MPMX19_01389: MPMX19_01389 - hypothetical protein, at 1,454,177 to 1,454,821
_01389
MPMX19_01390: MPMX19_01390 - Transcriptional regulatory protein LnrK, at 1,455,130 to 1,455,771
_01390
Position (kb)
1454
1455 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1454.191 kb on - strand at 1454.263 kb on - strand, within MPMX19_01389 at 1454.482 kb on - strand, within MPMX19_01389 at 1455.132 kb on - strand at 1455.132 kb on - strand at 1455.132 kb on - strand at 1455.132 kb on - strand at 1455.132 kb on - strand at 1455.245 kb on + strand, within MPMX19_01390 at 1455.246 kb on - strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.401 kb on + strand, within MPMX19_01390 at 1455.402 kb on - strand, within MPMX19_01390 at 1455.402 kb on - strand, within MPMX19_01390 at 1455.402 kb on - strand, within MPMX19_01390 at 1455.402 kb on - strand, within MPMX19_01390 at 1455.402 kb on - strand, within MPMX19_01390 at 1455.470 kb on + strand, within MPMX19_01390 at 1455.470 kb on + strand, within MPMX19_01390 at 1455.470 kb on + strand, within MPMX19_01390 at 1455.470 kb on + strand, within MPMX19_01390 at 1455.470 kb on + strand, within MPMX19_01390 at 1455.470 kb on + strand, within MPMX19_01390 at 1455.470 kb on + strand, within MPMX19_01390 at 1455.470 kb on + strand, within MPMX19_01390 at 1455.471 kb on - strand, within MPMX19_01390 at 1455.471 kb on - strand, within MPMX19_01390 at 1455.471 kb on - strand, within MPMX19_01390 at 1455.471 kb on - strand, within MPMX19_01390 at 1455.471 kb on - strand, within MPMX19_01390 at 1455.471 kb on - strand, within MPMX19_01390 at 1455.603 kb on + strand, within MPMX19_01390 at 1455.603 kb on + strand, within MPMX19_01390 at 1455.603 kb on + strand, within MPMX19_01390 at 1455.603 kb on + strand, within MPMX19_01390 at 1455.603 kb on + strand, within MPMX19_01390 at 1455.603 kb on + strand, within MPMX19_01390 at 1455.604 kb on - strand, within MPMX19_01390 at 1455.604 kb on - strand, within MPMX19_01390 at 1455.604 kb on - strand, within MPMX19_01390 at 1455.604 kb on - strand, within MPMX19_01390 at 1455.604 kb on - strand, within MPMX19_01390 at 1455.604 kb on - strand, within MPMX19_01390
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,454,191 - -0.2 1,454,263 - MPMX19_01389 0.13 -1.0 1,454,482 - MPMX19_01389 0.47 -1.2 1,455,132 - -0.7 1,455,132 - -2.3 1,455,132 - -0.2 1,455,132 - -0.5 1,455,132 - -1.9 1,455,245 + MPMX19_01390 0.18 -0.3 1,455,246 - MPMX19_01390 0.18 -1.3 1,455,401 + MPMX19_01390 0.42 +0.5 1,455,401 + MPMX19_01390 0.42 -0.3 1,455,401 + MPMX19_01390 0.42 -0.0 1,455,401 + MPMX19_01390 0.42 +1.2 1,455,401 + MPMX19_01390 0.42 +0.7 1,455,401 + MPMX19_01390 0.42 -0.5 1,455,401 + MPMX19_01390 0.42 +0.2 1,455,401 + MPMX19_01390 0.42 -0.6 1,455,401 + MPMX19_01390 0.42 +0.2 1,455,402 - MPMX19_01390 0.42 -1.2 1,455,402 - MPMX19_01390 0.42 +0.2 1,455,402 - MPMX19_01390 0.42 +0.1 1,455,402 - MPMX19_01390 0.42 -0.2 1,455,402 - MPMX19_01390 0.42 -0.9 1,455,470 + MPMX19_01390 0.53 +1.1 1,455,470 + MPMX19_01390 0.53 -1.4 1,455,470 + MPMX19_01390 0.53 -1.2 1,455,470 + MPMX19_01390 0.53 -0.5 1,455,470 + MPMX19_01390 0.53 -2.6 1,455,470 + MPMX19_01390 0.53 +0.1 1,455,470 + MPMX19_01390 0.53 +0.5 1,455,470 + MPMX19_01390 0.53 -0.7 1,455,471 - MPMX19_01390 0.53 -0.9 1,455,471 - MPMX19_01390 0.53 -0.4 1,455,471 - MPMX19_01390 0.53 -1.2 1,455,471 - MPMX19_01390 0.53 -0.7 1,455,471 - MPMX19_01390 0.53 -1.8 1,455,471 - MPMX19_01390 0.53 -0.5 1,455,603 + MPMX19_01390 0.74 +0.3 1,455,603 + MPMX19_01390 0.74 -0.4 1,455,603 + MPMX19_01390 0.74 +0.5 1,455,603 + MPMX19_01390 0.74 -1.0 1,455,603 + MPMX19_01390 0.74 -1.9 1,455,603 + MPMX19_01390 0.74 +0.5 1,455,604 - MPMX19_01390 0.74 -0.4 1,455,604 - MPMX19_01390 0.74 -0.5 1,455,604 - MPMX19_01390 0.74 -2.9 1,455,604 - MPMX19_01390 0.74 -0.7 1,455,604 - MPMX19_01390 0.74 -0.2 1,455,604 - MPMX19_01390 0.74 +2.0
Or see this region's nucleotide sequence