Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01239 and MPMX19_01240 are separated by 222 nucleotides MPMX19_01240 and MPMX19_01241 are separated by 188 nucleotides MPMX19_01241 and MPMX19_01242 are separated by 305 nucleotides
MPMX19_01239: MPMX19_01239 - CTP synthase, at 1,288,855 to 1,290,486
_01239
MPMX19_01240: MPMX19_01240 - Protein-export membrane protein SecG, at 1,290,709 to 1,291,032
_01240
MPMX19_01241: MPMX19_01241 - Triosephosphate isomerase, at 1,291,221 to 1,291,976
_01241
MPMX19_01242: MPMX19_01242 - hypothetical protein, at 1,292,282 to 1,293,238
_01242
Position (kb) 1291
1292 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1291.068 kb on - strand at 1291.068 kb on - strand at 1291.068 kb on - strand at 1291.088 kb on - strand at 1291.088 kb on - strand at 1291.118 kb on - strand at 1291.118 kb on - strand at 1291.118 kb on - strand at 1291.151 kb on + strand at 1291.152 kb on - strand at 1291.152 kb on - strand at 1291.163 kb on - strand at 1291.163 kb on - strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.002 kb on + strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.003 kb on - strand at 1292.004 kb on + strand at 1292.004 kb on + strand at 1292.004 kb on + strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.005 kb on - strand at 1292.050 kb on + strand at 1292.050 kb on + strand at 1292.050 kb on + strand at 1292.051 kb on - strand at 1292.051 kb on - strand at 1292.109 kb on + strand at 1292.109 kb on + strand at 1292.109 kb on + strand at 1292.109 kb on + strand at 1292.109 kb on + strand at 1292.110 kb on - strand at 1292.110 kb on - strand at 1292.110 kb on - strand at 1292.110 kb on - strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.123 kb on + strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.124 kb on - strand at 1292.197 kb on + strand at 1292.197 kb on + strand at 1292.197 kb on + strand at 1292.197 kb on + strand at 1292.197 kb on + strand at 1292.197 kb on + strand at 1292.197 kb on + strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.198 kb on - strand at 1292.233 kb on + strand at 1292.233 kb on + strand at 1292.233 kb on + strand at 1292.233 kb on + strand at 1292.234 kb on - strand at 1292.234 kb on - strand at 1292.234 kb on - strand at 1292.234 kb on - strand at 1292.234 kb on - strand at 1292.234 kb on - strand at 1292.234 kb on - strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.360 kb on + strand at 1292.361 kb on - strand at 1292.361 kb on - strand at 1292.361 kb on - strand at 1292.361 kb on - strand at 1292.361 kb on - strand at 1292.361 kb on - strand at 1292.361 kb on - strand at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.393 kb on + strand, within MPMX19_01242 at 1292.394 kb on - strand, within MPMX19_01242 at 1292.394 kb on - strand, within MPMX19_01242 at 1292.621 kb on + strand, within MPMX19_01242 at 1292.621 kb on + strand, within MPMX19_01242 at 1292.621 kb on + strand, within MPMX19_01242 at 1292.621 kb on + strand, within MPMX19_01242 at 1292.621 kb on + strand, within MPMX19_01242 at 1292.621 kb on + strand, within MPMX19_01242 at 1292.621 kb on + strand, within MPMX19_01242 at 1292.621 kb on + strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.622 kb on - strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.732 kb on + strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242 at 1292.733 kb on - strand, within MPMX19_01242
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,291,068 - +0.1 1,291,068 - -0.8 1,291,068 - -1.8 1,291,088 - +0.3 1,291,088 - -3.4 1,291,118 - -2.3 1,291,118 - -0.9 1,291,118 - -1.2 1,291,151 + -0.4 1,291,152 - +0.3 1,291,152 - -0.7 1,291,163 - -0.4 1,291,163 - +0.1 1,292,002 + -0.1 1,292,002 + -1.7 1,292,002 + -0.8 1,292,002 + -0.3 1,292,002 + -0.3 1,292,002 + -0.5 1,292,002 + -1.1 1,292,002 + -0.7 1,292,002 + +0.3 1,292,002 + -0.1 1,292,002 + -0.3 1,292,002 + +0.6 1,292,002 + -1.2 1,292,002 + -0.1 1,292,002 + -0.8 1,292,003 - -2.7 1,292,003 - -1.7 1,292,003 - -1.0 1,292,003 - -1.3 1,292,003 - -1.3 1,292,003 - -1.3 1,292,003 - -1.4 1,292,003 - +0.1 1,292,003 - +0.4 1,292,003 - -1.1 1,292,003 - -0.8 1,292,003 - -1.2 1,292,003 - +0.2 1,292,003 - -0.3 1,292,003 - +0.3 1,292,003 - -1.0 1,292,003 - -1.3 1,292,003 - -0.7 1,292,003 - -1.1 1,292,003 - -0.7 1,292,003 - -0.3 1,292,003 - -0.2 1,292,003 - -0.7 1,292,003 - -1.7 1,292,004 + -2.0 1,292,004 + -0.3 1,292,004 + -0.7 1,292,005 - -2.2 1,292,005 - -0.5 1,292,005 - -1.3 1,292,005 - -0.7 1,292,005 - -0.9 1,292,005 - -1.1 1,292,050 + -0.5 1,292,050 + +0.3 1,292,050 + -0.6 1,292,051 - -0.1 1,292,051 - -0.5 1,292,109 + -0.8 1,292,109 + -0.1 1,292,109 + -1.0 1,292,109 + -1.2 1,292,109 + +0.3 1,292,110 - -2.0 1,292,110 - -1.4 1,292,110 - -1.8 1,292,110 - -1.3 1,292,123 + +1.5 1,292,123 + -2.1 1,292,123 + -0.4 1,292,123 + -1.0 1,292,123 + -0.1 1,292,123 + +0.7 1,292,123 + -0.5 1,292,123 + +0.3 1,292,123 + +0.1 1,292,123 + +0.8 1,292,123 + +1.3 1,292,123 + +0.4 1,292,123 + -0.8 1,292,123 + -0.8 1,292,123 + -1.5 1,292,123 + +0.1 1,292,123 + -0.3 1,292,123 + -1.1 1,292,123 + -0.1 1,292,123 + -0.5 1,292,123 + -1.7 1,292,123 + -1.9 1,292,124 - -0.1 1,292,124 - -1.1 1,292,124 - -0.9 1,292,124 - -0.4 1,292,124 - -0.7 1,292,124 - +1.3 1,292,124 - -0.7 1,292,124 - -1.2 1,292,124 - -1.6 1,292,124 - -1.6 1,292,124 - -1.4 1,292,124 - +0.3 1,292,124 - -0.5 1,292,124 - -0.3 1,292,124 - +0.7 1,292,124 - -0.3 1,292,124 - -0.1 1,292,124 - +0.9 1,292,124 - -0.5 1,292,124 - -2.0 1,292,124 - -0.5 1,292,124 - -1.1 1,292,124 - -1.9 1,292,124 - -0.7 1,292,124 - -1.0 1,292,124 - +1.3 1,292,124 - +0.1 1,292,124 - +0.3 1,292,124 - -0.3 1,292,197 + -0.2 1,292,197 + +1.3 1,292,197 + -0.5 1,292,197 + -0.7 1,292,197 + +1.9 1,292,197 + +0.1 1,292,197 + -1.0 1,292,198 - -0.2 1,292,198 - -0.8 1,292,198 - -0.3 1,292,198 - -1.2 1,292,198 - -0.7 1,292,198 - -0.7 1,292,198 - -0.3 1,292,198 - -0.2 1,292,198 - +0.3 1,292,198 - +1.0 1,292,233 + -0.9 1,292,233 + +0.5 1,292,233 + -0.5 1,292,233 + -0.4 1,292,234 - -1.7 1,292,234 - +0.9 1,292,234 - -2.3 1,292,234 - -0.1 1,292,234 - -2.2 1,292,234 - -0.3 1,292,234 - -0.1 1,292,360 + -1.2 1,292,360 + +0.3 1,292,360 + +0.1 1,292,360 + -0.7 1,292,360 + -0.1 1,292,360 + -0.1 1,292,360 + -1.4 1,292,360 + -0.3 1,292,360 + -2.1 1,292,360 + +0.2 1,292,360 + -1.7 1,292,360 + -1.3 1,292,360 + -0.1 1,292,360 + -1.3 1,292,360 + -2.7 1,292,361 - -0.3 1,292,361 - -0.6 1,292,361 - -0.8 1,292,361 - -0.3 1,292,361 - +1.5 1,292,361 - +0.9 1,292,361 - -0.2 1,292,393 + MPMX19_01242 0.12 -0.4 1,292,393 + MPMX19_01242 0.12 -1.4 1,292,393 + MPMX19_01242 0.12 -1.0 1,292,393 + MPMX19_01242 0.12 -0.1 1,292,393 + MPMX19_01242 0.12 -0.9 1,292,393 + MPMX19_01242 0.12 -0.5 1,292,393 + MPMX19_01242 0.12 -2.3 1,292,393 + MPMX19_01242 0.12 -1.1 1,292,393 + MPMX19_01242 0.12 -2.3 1,292,393 + MPMX19_01242 0.12 +0.0 1,292,394 - MPMX19_01242 0.12 -0.6 1,292,394 - MPMX19_01242 0.12 -0.1 1,292,621 + MPMX19_01242 0.35 -1.4 1,292,621 + MPMX19_01242 0.35 -0.4 1,292,621 + MPMX19_01242 0.35 -1.5 1,292,621 + MPMX19_01242 0.35 -1.5 1,292,621 + MPMX19_01242 0.35 -0.1 1,292,621 + MPMX19_01242 0.35 +0.2 1,292,621 + MPMX19_01242 0.35 -1.9 1,292,621 + MPMX19_01242 0.35 +1.1 1,292,622 - MPMX19_01242 0.36 -1.8 1,292,622 - MPMX19_01242 0.36 -1.6 1,292,622 - MPMX19_01242 0.36 -0.7 1,292,622 - MPMX19_01242 0.36 -0.5 1,292,622 - MPMX19_01242 0.36 -0.9 1,292,622 - MPMX19_01242 0.36 -0.2 1,292,622 - MPMX19_01242 0.36 +0.3 1,292,622 - MPMX19_01242 0.36 -1.8 1,292,622 - MPMX19_01242 0.36 -1.2 1,292,622 - MPMX19_01242 0.36 -0.7 1,292,622 - MPMX19_01242 0.36 +0.1 1,292,732 + MPMX19_01242 0.47 -1.4 1,292,732 + MPMX19_01242 0.47 -1.4 1,292,732 + MPMX19_01242 0.47 +0.9 1,292,732 + MPMX19_01242 0.47 -0.4 1,292,732 + MPMX19_01242 0.47 -0.1 1,292,732 + MPMX19_01242 0.47 -0.2 1,292,732 + MPMX19_01242 0.47 -0.4 1,292,732 + MPMX19_01242 0.47 -0.8 1,292,732 + MPMX19_01242 0.47 -1.4 1,292,732 + MPMX19_01242 0.47 -0.2 1,292,732 + MPMX19_01242 0.47 -0.1 1,292,732 + MPMX19_01242 0.47 -0.5 1,292,732 + MPMX19_01242 0.47 +0.1 1,292,732 + MPMX19_01242 0.47 -0.4 1,292,732 + MPMX19_01242 0.47 -2.2 1,292,732 + MPMX19_01242 0.47 -0.4 1,292,732 + MPMX19_01242 0.47 -1.4 1,292,732 + MPMX19_01242 0.47 -0.8 1,292,732 + MPMX19_01242 0.47 +1.5 1,292,732 + MPMX19_01242 0.47 -0.7 1,292,732 + MPMX19_01242 0.47 -0.2 1,292,732 + MPMX19_01242 0.47 -0.1 1,292,732 + MPMX19_01242 0.47 -1.3 1,292,732 + MPMX19_01242 0.47 -0.7 1,292,732 + MPMX19_01242 0.47 -0.1 1,292,732 + MPMX19_01242 0.47 -2.0 1,292,732 + MPMX19_01242 0.47 -1.4 1,292,732 + MPMX19_01242 0.47 -2.2 1,292,732 + MPMX19_01242 0.47 +0.1 1,292,733 - MPMX19_01242 0.47 -0.1 1,292,733 - MPMX19_01242 0.47 +0.1 1,292,733 - MPMX19_01242 0.47 -3.0 1,292,733 - MPMX19_01242 0.47 -1.6 1,292,733 - MPMX19_01242 0.47 +0.2 1,292,733 - MPMX19_01242 0.47 -1.0 1,292,733 - MPMX19_01242 0.47 -2.1 1,292,733 - MPMX19_01242 0.47 +0.7 1,292,733 - MPMX19_01242 0.47 -0.8 1,292,733 - MPMX19_01242 0.47 -0.3 1,292,733 - MPMX19_01242 0.47 -0.7 1,292,733 - MPMX19_01242 0.47 -0.9 1,292,733 - MPMX19_01242 0.47 +0.3 1,292,733 - MPMX19_01242 0.47 -0.7 1,292,733 - MPMX19_01242 0.47 -1.5 1,292,733 - MPMX19_01242 0.47 -1.4
Or see this region's nucleotide sequence